RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 VAMP4O75379 141 aa27.83■■■□□ 2.05
CHRNA7-228ENST00000637519 GAS2L2Q8NHY3 880 aa27.83■■■□□ 2.05
CHRNA7-228ENST00000637519 NOB1Q9ULX3 412 aaKnown RBP27.83■■■□□ 2.05
CHRNA7-228ENST00000637519 MIS18AQ9NYP9 233 aa27.83■■■□□ 2.05
CHRNA7-228ENST00000637519 TRIM27P14373 513 aa27.82■■■□□ 2.04
CHRNA7-228ENST00000637519 RTF1Q92541 710 aaKnown RBP27.82■■■□□ 2.04
CHRNA7-228ENST00000637519 TWISTNBQ3B726 338 aaPredicted RBP27.81■■■□□ 2.04
CHRNA7-228ENST00000637519 ANKRD24Q8TF21 1146 aa27.81■■■□□ 2.04
CHRNA7-228ENST00000637519 KDM2BQ8NHM5 1336 aa27.8■■■□□ 2.04
CHRNA7-228ENST00000637519 SLAIN2Q9P270 581 aa27.8■■■□□ 2.04
CHRNA7-228ENST00000637519 CHL1O00533 1208 aa27.79■■■□□ 2.04
CHRNA7-228ENST00000637519 FTSJ3Q8IY81 847 aaKnown RBP27.79■■■□□ 2.04
CHRNA7-228ENST00000637519 SPATA31A3Q5VYP0 1347 aa27.79■■■□□ 2.04
CHRNA7-228ENST00000637519 DZIP1LQ8IYY4 767 aaKnown RBP27.79■■■□□ 2.04
CHRNA7-228ENST00000637519 RGPD5Q99666 1765 aa27.78■■■□□ 2.04
CHRNA7-228ENST00000637519 ALDH1L2Q3SY69 923 aa27.78■■■□□ 2.04
CHRNA7-228ENST00000637519 ATF7IPQ6VMQ6 1270 aa27.77■■■□□ 2.04
CHRNA7-228ENST00000637519 GNAT3A8MTJ3 354 aa27.76■■■□□ 2.03
CHRNA7-228ENST00000637519 MAP3K5Q99683 1374 aa27.76■■■□□ 2.03
CHRNA7-228ENST00000637519 KIF16BQ96L93 1317 aa27.75■■■□□ 2.03
CHRNA7-228ENST00000637519 MVPQ14764 893 aaKnown RBP27.74■■■□□ 2.03
CHRNA7-228ENST00000637519 CHRNA2Q15822 529 aa27.74■■■□□ 2.03
CHRNA7-228ENST00000637519 MRPL50Q8N5N7 158 aaKnown RBP27.74■■■□□ 2.03
CHRNA7-228ENST00000637519 LRRC37A3O60309 1634 aa27.74■■■□□ 2.03
CHRNA7-228ENST00000637519 ERBB3P21860 1342 aa27.73■■■□□ 2.03
CHRNA7-228ENST00000637519 RBM19Q9Y4C8 960 aaKnown RBP27.73■■■□□ 2.03
CHRNA7-228ENST00000637519 IL17REQ8NFR9 667 aa27.72■■■□□ 2.03
CHRNA7-228ENST00000637519 CRYBG1Q9Y4K1 1723 aa27.72■■■□□ 2.03
CHRNA7-228ENST00000637519 ZNF428Q96B54 188 aa27.72■■■□□ 2.03
CHRNA7-228ENST00000637519 TSPYL4Q9UJ04 414 aa27.72■■■□□ 2.03
CHRNA7-228ENST00000637519 IGHDP01880 384 aa27.71■■■□□ 2.03
CHRNA7-228ENST00000637519 CENPQQ7L2Z9 268 aaPredicted RBP27.71■■■□□ 2.03
CHRNA7-228ENST00000637519 ITPRIPQ8IWB1 547 aa27.71■■■□□ 2.03
CHRNA7-228ENST00000637519 TMEM57Q8N5G2 664 aa27.71■■■□□ 2.03
CHRNA7-228ENST00000637519 NCAPD2Q15021 1401 aa27.69■■■□□ 2.02
CHRNA7-228ENST00000637519 HTATSF1O43719 755 aaKnown RBP27.69■■■□□ 2.02
CHRNA7-228ENST00000637519 PCDHB15Q9Y5E8 787 aa27.69■■■□□ 2.02
CHRNA7-228ENST00000637519 KIAA0232Q92628 1395 aa27.69■■■□□ 2.02
CHRNA7-228ENST00000637519 CAMTA1Q9Y6Y1 1673 aa27.68■■■□□ 2.02
CHRNA7-228ENST00000637519 SOS2Q07890 1332 aaPredicted RBP27.68■■■□□ 2.02
CHRNA7-228ENST00000637519 IPO8O15397 1037 aaKnown RBP27.67■■■□□ 2.02
CHRNA7-228ENST00000637519 BRPF1P55201 1214 aaPredicted RBP27.67■■■□□ 2.02
CHRNA7-228ENST00000637519 COL18A1P39060 1754 aa27.67■■■□□ 2.02
CHRNA7-228ENST00000637519 MS4A1P11836 297 aa27.65■■■□□ 2.02
CHRNA7-228ENST00000637519 ZNF530Q6P9A1 599 aaPredicted RBP27.65■■■□□ 2.02
CHRNA7-228ENST00000637519 LGR6Q9HBX8 967 aa27.64■■■□□ 2.02
CHRNA7-228ENST00000637519 NLRP2Q9NX02 1062 aa27.64■■■□□ 2.02
CHRNA7-228ENST00000637519 LMO7Q8WWI1 1683 aa27.62■■■□□ 2.01
CHRNA7-228ENST00000637519 CSB-PGBD3P0DP91 1061 aa27.61■■■□□ 2.01
CHRNA7-228ENST00000637519 PLEKHO1Q53GL0 409 aaPredicted RBP27.61■■■□□ 2.01
CHRNA7-228ENST00000637519 MPRIPQ6WCQ1 1025 aa27.61■■■□□ 2.01
CHRNA7-228ENST00000637519 DDX19BQ9UMR2 479 aa27.6■■■□□ 2.01
CHRNA7-228ENST00000637519 CEMIPQ8WUJ3 1361 aa27.6■■■□□ 2.01
CHRNA7-228ENST00000637519 TAF7Q15545 349 aaPredicted RBP27.58■■■□□ 2.01
CHRNA7-228ENST00000637519 CPDO75976 1380 aa27.58■■■□□ 2.01
CHRNA7-228ENST00000637519 FAM208AQ9UK61 1670 aaKnown RBP27.58■■■□□ 2.01
CHRNA7-228ENST00000637519 AKAP4Q5JQC9 854 aa27.58■■■□□ 2.01
CHRNA7-228ENST00000637519 NHSL1Q5SYE7 1610 aa27.57■■■□□ 2
CHRNA7-228ENST00000637519 AMOTQ4VCS5 1084 aa27.57■■■□□ 2
CHRNA7-228ENST00000637519 ARHGAP45Q92619 1136 aa27.57■■■□□ 2
CHRNA7-228ENST00000637519 HAP1P54257 671 aaPredicted RBP27.56■■■□□ 2
CHRNA7-228ENST00000637519 MEGF6O75095 1541 aa27.56■■■□□ 2
CHRNA7-228ENST00000637519 ABCC4O15439 1325 aa27.55■■■□□ 2
CHRNA7-228ENST00000637519 AAMPQ13685 434 aa27.55■■■□□ 2
CHRNA7-228ENST00000637519 NECTIN2Q92692 538 aa27.55■■■□□ 2
CHRNA7-228ENST00000637519 PRDM11Q9NQV5 511 aa27.55■■■□□ 2
CHRNA7-228ENST00000637519 C1orf141Q5JVX7 400 aa27.55■■■□□ 2
CHRNA7-228ENST00000637519 ABCA3Q99758 1704 aa27.54■■■□□ 2
CHRNA7-228ENST00000637519 RGS3P49796 1198 aa27.53■■■□□ 2
CHRNA7-228ENST00000637519 RAPGEF4Q8WZA2 1011 aa27.53■■■□□ 2
CHRNA7-228ENST00000637519 ZBTB40Q9NUA8 1239 aa27.53■■■□□ 2
CHRNA7-228ENST00000637519 RGS12O14924 1447 aa27.52■■■□□ 2
CHRNA7-228ENST00000637519 SLC4A2P04920 1241 aa27.52■■■□□ 2
CHRNA7-228ENST00000637519 RNMTO43148 476 aaKnown RBP27.52■■■□□ 2
CHRNA7-228ENST00000637519 KCNQ3O43525 872 aa27.52■■■□□ 2
CHRNA7-228ENST00000637519 ABCC6O95255 1503 aa27.52■■■□□ 2
CHRNA7-228ENST00000637519 API5Q9BZZ5 524 aaKnown RBP27.51■■□□□ 1.99
CHRNA7-228ENST00000637519 G2E3Q7L622 706 aa27.5■■□□□ 1.99
CHRNA7-228ENST00000637519 TEFQ10587 303 aa27.5■■□□□ 1.99
CHRNA7-228ENST00000637519 C1orf115Q9H7X2 142 aa27.49■■□□□ 1.99
CHRNA7-228ENST00000637519 LTBP4Q8N2S1 1624 aa27.48■■□□□ 1.99
CHRNA7-228ENST00000637519 ZBTB7BO15156 539 aaPredicted RBP27.48■■□□□ 1.99
CHRNA7-228ENST00000637519 TATP17735 454 aaPredicted RBP27.48■■□□□ 1.99
CHRNA7-228ENST00000637519 ROBO1Q9Y6N7 1651 aa27.47■■□□□ 1.99
CHRNA7-228ENST00000637519 VIRMAQ69YN4 1812 aaKnown RBP27.47■■□□□ 1.99
CHRNA7-228ENST00000637519 RWDD1Q9H446 243 aaPredicted RBP27.47■■□□□ 1.99
CHRNA7-228ENST00000637519 BABAM1Q9NWV8 329 aa27.47■■□□□ 1.99
CHRNA7-228ENST00000637519 BTBD11A6QL63 1104 aa27.46■■□□□ 1.99
CHRNA7-228ENST00000637519 KDM3BQ7LBC6 1761 aa27.46■■□□□ 1.99
CHRNA7-228ENST00000637519 COL5A2P05997 1499 aaPredicted RBP27.44■■□□□ 1.98
CHRNA7-228ENST00000637519 EIF4A1P60842 406 aaKnown RBP27.44■■□□□ 1.98
CHRNA7-228ENST00000637519 PDE4AP27815 886 aa27.43■■□□□ 1.98
CHRNA7-228ENST00000637519 F6X3S4 739 aa27.42■■□□□ 1.98
CHRNA7-228ENST00000637519 TOM1L2Q6ZVM7 507 aa27.42■■□□□ 1.98
CHRNA7-228ENST00000637519 STK31Q9BXU1 1019 aa27.42■■□□□ 1.98
CHRNA7-228ENST00000637519 PTPRCP08575 1304 aa27.42■■□□□ 1.98
CHRNA7-228ENST00000637519 WDR17Q8IZU2 1322 aa27.42■■□□□ 1.98
CHRNA7-228ENST00000637519 KDM6AO15550 1401 aaPredicted RBP27.42■■□□□ 1.98
CHRNA7-228ENST00000637519 PHKG2P15735 406 aa27.42■■□□□ 1.98
CHRNA7-228ENST00000637519 CCDC30Q5VVM6 783 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms