RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 MEGF6O75095 1541 aa26.05■■□□□ 1.76
CLN6-221ENST00000637494 SYTL4Q96C24 671 aaPredicted RBP26.05■■□□□ 1.76
CLN6-221ENST00000637494 PANK3Q9H999 370 aa26.05■■□□□ 1.76
CLN6-221ENST00000637494 SPON1Q9HCB6 807 aa26.04■■□□□ 1.76
CLN6-221ENST00000637494 ANO8Q9HCE9 1232 aaPredicted RBP26.03■■□□□ 1.76
CLN6-221ENST00000637494 BTAF1O14981 1849 aa26.02■■□□□ 1.76
CLN6-221ENST00000637494 KAT6BQ8WYB5 2073 aa26.02■■□□□ 1.76
CLN6-221ENST00000637494 WASHC2AQ641Q2 1341 aa26.01■■□□□ 1.75
CLN6-221ENST00000637494 PPP1R1BQ9UD71 204 aaPredicted RBP26.01■■□□□ 1.75
CLN6-221ENST00000637494 ANKRD26Q9UPS8 1709 aa26.01■■□□□ 1.75
CLN6-221ENST00000637494 NSD2O96028 1365 aa26■■□□□ 1.75
CLN6-221ENST00000637494 TNNT2P45379 298 aaPredicted RBP26■■□□□ 1.75
CLN6-221ENST00000637494 PCDH11XQ9BZA7 1347 aa25.99■■□□□ 1.75
CLN6-221ENST00000637494 PCDH11YQ9BZA8 1340 aa25.99■■□□□ 1.75
CLN6-221ENST00000637494 PRIM1P49642 420 aaKnown RBP25.99■■□□□ 1.75
CLN6-221ENST00000637494 SLC15A2Q16348 729 aa25.99■■□□□ 1.75
CLN6-221ENST00000637494 POLKQ9UBT6 870 aa25.99■■□□□ 1.75
CLN6-221ENST00000637494 MAP2P11137 1827 aaKnown RBP25.99■■□□□ 1.75
CLN6-221ENST00000637494 KNSTRNQ9Y448 316 aa25.98■■□□□ 1.75
CLN6-221ENST00000637494 DOT1LQ8TEK3 1739 aa25.97■■□□□ 1.75
CLN6-221ENST00000637494 SLC27A3Q5K4L6 730 aa25.96■■□□□ 1.75
CLN6-221ENST00000637494 SHANK3Q9BYB0 1731 aa25.96■■□□□ 1.75
CLN6-221ENST00000637494 MORC1Q86VD1 984 aa25.95■■□□□ 1.74
CLN6-221ENST00000637494 SPG7Q9UQ90 795 aa25.93■■□□□ 1.74
CLN6-221ENST00000637494 EYA1Q99502 592 aa25.91■■□□□ 1.74
CLN6-221ENST00000637494 CASZ1Q86V15 1759 aa25.91■■□□□ 1.74
CLN6-221ENST00000637494 KIF7Q2M1P5 1343 aa25.89■■□□□ 1.74
CLN6-221ENST00000637494 NCAPD2Q15021 1401 aa25.89■■□□□ 1.74
CLN6-221ENST00000637494 ZBTB7AO95365 584 aa25.89■■□□□ 1.74
CLN6-221ENST00000637494 HMGB2P26583 209 aaKnown RBP25.88■■□□□ 1.73
CLN6-221ENST00000637494 EIF4A2Q14240 407 aaKnown RBP25.88■■□□□ 1.73
CLN6-221ENST00000637494 LRRC4BQ9NT99 713 aa25.88■■□□□ 1.73
CLN6-221ENST00000637494 PAPPAQ13219 1627 aa25.87■■□□□ 1.73
CLN6-221ENST00000637494 PKD1L3Q7Z443 1732 aa25.86■■□□□ 1.73
CLN6-221ENST00000637494 CYP27B1O15528 508 aa25.86■■□□□ 1.73
CLN6-221ENST00000637494 PDGFDQ9GZP0 370 aaPredicted RBP25.86■■□□□ 1.73
CLN6-221ENST00000637494 MTFR1LQ9H019 292 aa25.86■■□□□ 1.73
CLN6-221ENST00000637494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.86■■□□□ 1.73
CLN6-221ENST00000637494 ATF5Q9Y2D1 282 aaPredicted RBP25.86■■□□□ 1.73
CLN6-221ENST00000637494 DCAF8L1A6NGE4 600 aa25.85■■□□□ 1.73
CLN6-221ENST00000637494 CCNL1Q9UK58 526 aaPredicted RBP25.85■■□□□ 1.73
CLN6-221ENST00000637494 ZNF827Q17R98 1081 aa25.84■■□□□ 1.73
CLN6-221ENST00000637494 MPRIPQ6WCQ1 1025 aa25.84■■□□□ 1.73
CLN6-221ENST00000637494 TFCP2L1Q9NZI6 479 aa25.83■■□□□ 1.73
CLN6-221ENST00000637494 LY75O60449 1722 aa25.82■■□□□ 1.72
CLN6-221ENST00000637494 PLEKHG2Q9H7P9 1386 aa25.82■■□□□ 1.72
CLN6-221ENST00000637494 IFNL2Q8IZJ0 200 aa25.81■■□□□ 1.72
CLN6-221ENST00000637494 SMARCC1Q92922 1105 aaPredicted RBP25.81■■□□□ 1.72
CLN6-221ENST00000637494 AKT1S1Q96B36 256 aa25.81■■□□□ 1.72
CLN6-221ENST00000637494 KCNQ4P56696 695 aa25.8■■□□□ 1.72
CLN6-221ENST00000637494 NKX1-1Q15270 411 aaPredicted RBP25.8■■□□□ 1.72
CLN6-221ENST00000637494 IGSF1Q8N6C5 1336 aa25.8■■□□□ 1.72
CLN6-221ENST00000637494 AMER1Q5JTC6 1135 aaPredicted RBP25.78■■□□□ 1.72
CLN6-221ENST00000637494 SLC16A10Q8TF71 515 aa25.78■■□□□ 1.72
CLN6-221ENST00000637494 PALLDQ8WX93 1383 aa25.78■■□□□ 1.72
CLN6-221ENST00000637494 PTGER2P43116 358 aa25.77■■□□□ 1.72
CLN6-221ENST00000637494 PHKG2P15735 406 aa25.76■■□□□ 1.71
CLN6-221ENST00000637494 PLEKHO1Q53GL0 409 aaPredicted RBP25.76■■□□□ 1.71
CLN6-221ENST00000637494 TMOD3Q9NYL9 352 aa25.76■■□□□ 1.71
CLN6-221ENST00000637494 QSER1Q2KHR3 1735 aa25.75■■□□□ 1.71
CLN6-221ENST00000637494 HSP90AB1P08238 724 aaKnown RBP25.74■■□□□ 1.71
CLN6-221ENST00000637494 AMOTQ4VCS5 1084 aa25.74■■□□□ 1.71
CLN6-221ENST00000637494 TOGARAM1Q9Y4F4 1720 aa25.74■■□□□ 1.71
CLN6-221ENST00000637494 PNPLA7Q6ZV29 1317 aa25.73■■□□□ 1.71
CLN6-221ENST00000637494 ITGB4P16144 1822 aa25.73■■□□□ 1.71
CLN6-221ENST00000637494 PIGBQ92521 554 aa25.73■■□□□ 1.71
CLN6-221ENST00000637494 MSH5O43196 834 aa25.72■■□□□ 1.71
CLN6-221ENST00000637494 POLD1P28340 1107 aa25.72■■□□□ 1.71
CLN6-221ENST00000637494 CC2D1BQ5T0F9 858 aaKnown RBP25.71■■□□□ 1.71
CLN6-221ENST00000637494 ARXQ96QS3 562 aa25.71■■□□□ 1.71
CLN6-221ENST00000637494 PER1O15534 1290 aaPredicted RBP25.7■■□□□ 1.7
CLN6-221ENST00000637494 C5P01031 1676 aa25.69■■□□□ 1.7
CLN6-221ENST00000637494 C1orf141Q5JVX7 400 aa25.69■■□□□ 1.7
CLN6-221ENST00000637494 SULT6B1Q6IMI4 303 aa25.69■■□□□ 1.7
CLN6-221ENST00000637494 ZNF530Q6P9A1 599 aaPredicted RBP25.69■■□□□ 1.7
CLN6-221ENST00000637494 FLAD1Q8NFF5 587 aa25.69■■□□□ 1.7
CLN6-221ENST00000637494 SGIP1Q9BQI5 828 aa25.69■■□□□ 1.7
CLN6-221ENST00000637494 MTHFSP49914 203 aa25.68■■□□□ 1.7
CLN6-221ENST00000637494 DCAF5Q96JK2 942 aa25.68■■□□□ 1.7
CLN6-221ENST00000637494 FHDC1Q9C0D6 1143 aaPredicted RBP25.68■■□□□ 1.7
CLN6-221ENST00000637494 AK7Q96M32 723 aa25.67■■□□□ 1.7
CLN6-221ENST00000637494 TUBGCP6Q96RT7 1819 aa25.66■■□□□ 1.7
CLN6-221ENST00000637494 ERVV-2B6SEH9 535 aa25.66■■□□□ 1.7
CLN6-221ENST00000637494 IL13P35225 146 aa25.66■■□□□ 1.7
CLN6-221ENST00000637494 AEBP1Q8IUX7 1158 aa25.66■■□□□ 1.7
CLN6-221ENST00000637494 SYT17Q9BSW7 474 aa25.65■■□□□ 1.7
CLN6-221ENST00000637494 NPC1L1Q9UHC9 1359 aa25.65■■□□□ 1.7
CLN6-221ENST00000637494 LOC102724428A0A0B4J2F2 783 aa25.64■■□□□ 1.7
CLN6-221ENST00000637494 SIK1P57059 783 aa25.64■■□□□ 1.7
CLN6-221ENST00000637494 CNGB1Q14028 1251 aaPredicted RBP25.64■■□□□ 1.7
CLN6-221ENST00000637494 COL23A1Q86Y22 540 aaPredicted RBP25.63■■□□□ 1.69
CLN6-221ENST00000637494 ASAP1Q9ULH1 1129 aa25.63■■□□□ 1.69
CLN6-221ENST00000637494 KDRP35968 1356 aa25.62■■□□□ 1.69
CLN6-221ENST00000637494 DIAPH1O60610 1272 aaKnown RBP25.62■■□□□ 1.69
CLN6-221ENST00000637494 CABP4P57796 275 aa25.62■■□□□ 1.69
CLN6-221ENST00000637494 KLHL34Q8N239 644 aa25.62■■□□□ 1.69
CLN6-221ENST00000637494 TAF1LQ8IZX4 1826 aa25.62■■□□□ 1.69
CLN6-221ENST00000637494 ATP6V1AP38606 617 aa25.61■■□□□ 1.69
CLN6-221ENST00000637494 C4BP0C0L5 1744 aa25.6■■□□□ 1.69
CLN6-221ENST00000637494 ATG3Q9NT62 314 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms