RNA–Protein interactions for RNA: ENST00000637258.1

CLCN2-218, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 4

Gene CLCN2, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-218ENST00000637258 SYTL4Q96C24 671 aaPredicted RBP22.25■■□□□ 1.15
CLCN2-218ENST00000637258 POLD1P28340 1107 aa22.24■■□□□ 1.15
CLCN2-218ENST00000637258 FBLN1P23142 703 aa22.23■■□□□ 1.15
CLCN2-218ENST00000637258 TFCP2L1Q9NZI6 479 aa22.23■■□□□ 1.15
CLCN2-218ENST00000637258 UTRNP46939 3433 aa22.22■■□□□ 1.15
CLCN2-218ENST00000637258 NBPF6Q5VWK0 638 aa22.22■■□□□ 1.15
CLCN2-218ENST00000637258 ZNF784Q8NCA9 323 aaPredicted RBP22.22■■□□□ 1.15
CLCN2-218ENST00000637258 NBPF4Q96M43 638 aa22.22■■□□□ 1.15
CLCN2-218ENST00000637258 PNPLA7Q6ZV29 1317 aa22.22■■□□□ 1.15
CLCN2-218ENST00000637258 KIF24Q5T7B8 1368 aa22.22■■□□□ 1.15
CLCN2-218ENST00000637258 RAPGEF4Q8WZA2 1011 aa22.21■■□□□ 1.15
CLCN2-218ENST00000637258 RRS1Q15050 365 aaKnown RBP22.2■■□□□ 1.14
CLCN2-218ENST00000637258 GGNBP2Q9H3C7 697 aa22.2■■□□□ 1.14
CLCN2-218ENST00000637258 SMG6Q86US8 1419 aaKnown RBP22.2■■□□□ 1.14
CLCN2-218ENST00000637258 NSD2O96028 1365 aa22.19■■□□□ 1.14
CLCN2-218ENST00000637258 QSER1Q2KHR3 1735 aa22.19■■□□□ 1.14
CLCN2-218ENST00000637258 MEGF6O75095 1541 aa22.18■■□□□ 1.14
CLCN2-218ENST00000637258 INSRP06213 1382 aa22.18■■□□□ 1.14
CLCN2-218ENST00000637258 TATP17735 454 aaPredicted RBP22.18■■□□□ 1.14
CLCN2-218ENST00000637258 CCNL1Q9UK58 526 aaPredicted RBP22.18■■□□□ 1.14
CLCN2-218ENST00000637258 USP47Q96K76 1375 aa22.17■■□□□ 1.14
CLCN2-218ENST00000637258 GPR162Q16538 588 aa22.16■■□□□ 1.14
CLCN2-218ENST00000637258 FLT4P35916 1363 aa22.14■■□□□ 1.14
CLCN2-218ENST00000637258 CHD4Q14839 1912 aa22.14■■□□□ 1.14
CLCN2-218ENST00000637258 PCDH11XQ9BZA7 1347 aa22.14■■□□□ 1.14
CLCN2-218ENST00000637258 PCDH11YQ9BZA8 1340 aa22.14■■□□□ 1.14
CLCN2-218ENST00000637258 KCNQ4P56696 695 aa22.14■■□□□ 1.13
CLCN2-218ENST00000637258 HSP90AB2PQ58FF8 381 aa22.14■■□□□ 1.13
CLCN2-218ENST00000637258 LY75O60449 1722 aa22.14■■□□□ 1.13
CLCN2-218ENST00000637258 COL24A1Q17RW2 1714 aa22.14■■□□□ 1.13
CLCN2-218ENST00000637258 TIMELESSQ9UNS1 1208 aa22.13■■□□□ 1.13
CLCN2-218ENST00000637258 FLAD1Q8NFF5 587 aa22.12■■□□□ 1.13
CLCN2-218ENST00000637258 USHBP1Q8N6Y0 703 aa22.11■■□□□ 1.13
CLCN2-218ENST00000637258 RGPD2P0DJD1 1756 aa22.11■■□□□ 1.13
CLCN2-218ENST00000637258 DOT1LQ8TEK3 1739 aa22.11■■□□□ 1.13
CLCN2-218ENST00000637258 SHANK3Q9BYB0 1731 aa22.11■■□□□ 1.13
CLCN2-218ENST00000637258 COL23A1Q86Y22 540 aaPredicted RBP22.1■■□□□ 1.13
CLCN2-218ENST00000637258 PCGF6Q9BYE7 350 aa22.1■■□□□ 1.13
CLCN2-218ENST00000637258 CLSPNQ9HAW4 1339 aa22.09■■□□□ 1.13
CLCN2-218ENST00000637258 KLHL34Q8N239 644 aa22.09■■□□□ 1.13
CLCN2-218ENST00000637258 SMARCC1Q92922 1105 aaPredicted RBP22.09■■□□□ 1.13
CLCN2-218ENST00000637258 GRIN3BO60391 1043 aa22.08■■□□□ 1.13
CLCN2-218ENST00000637258 CARD14Q9BXL6 1004 aa22.08■■□□□ 1.13
CLCN2-218ENST00000637258 MSH5O43196 834 aa22.07■■□□□ 1.12
CLCN2-218ENST00000637258 CYP27B1O15528 508 aa22.06■■□□□ 1.12
CLCN2-218ENST00000637258 NKX1-1Q15270 411 aaPredicted RBP22.06■■□□□ 1.12
CLCN2-218ENST00000637258 MPRIPQ6WCQ1 1025 aa22.05■■□□□ 1.12
CLCN2-218ENST00000637258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.05■■□□□ 1.12
CLCN2-218ENST00000637258 WASHC2AQ641Q2 1341 aa22.05■■□□□ 1.12
CLCN2-218ENST00000637258 PALLDQ8WX93 1383 aa22.04■■□□□ 1.12
CLCN2-218ENST00000637258 C1QTNF8P60827 252 aa22.04■■□□□ 1.12
CLCN2-218ENST00000637258 NLGN2Q8NFZ4 835 aa22.04■■□□□ 1.12
CLCN2-218ENST00000637258 SPG7Q9UQ90 795 aa22.04■■□□□ 1.12
CLCN2-218ENST00000637258 CD2APQ9Y5K6 639 aa22.03■■□□□ 1.12
CLCN2-218ENST00000637258 EMILIN1Q9Y6C2 1016 aa22.03■■□□□ 1.12
CLCN2-218ENST00000637258 NCAPD2Q15021 1401 aa22.03■■□□□ 1.12
CLCN2-218ENST00000637258 TUBGCP6Q96RT7 1819 aa22.03■■□□□ 1.12
CLCN2-218ENST00000637258 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
CLCN2-218ENST00000637258 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
CLCN2-218ENST00000637258 KIF20BQ96Q89 1820 aa22.01■■□□□ 1.11
CLCN2-218ENST00000637258 GOLGB1Q14789 3259 aaKnown RBP21.99■■□□□ 1.11
CLCN2-218ENST00000637258 PIGBQ92521 554 aa21.99■■□□□ 1.11
CLCN2-218ENST00000637258 PLEKHG2Q9H7P9 1386 aa21.99■■□□□ 1.11
CLCN2-218ENST00000637258 PPM1GO15355 546 aaPredicted RBP21.98■■□□□ 1.11
CLCN2-218ENST00000637258 AK7Q96M32 723 aa21.98■■□□□ 1.11
CLCN2-218ENST00000637258 EYA1Q99502 592 aa21.98■■□□□ 1.11
CLCN2-218ENST00000637258 C5P01031 1676 aa21.96■■□□□ 1.11
CLCN2-218ENST00000637258 YBX3P16989 372 aaKnown RBP eCLIP21.96■■□□□ 1.11
CLCN2-218ENST00000637258 MSL1Q68DK7 614 aa21.96■■□□□ 1.11
CLCN2-218ENST00000637258 IFNL2Q8IZJ0 200 aa21.96■■□□□ 1.11
CLCN2-218ENST00000637258 POLKQ9UBT6 870 aa21.96■■□□□ 1.11
CLCN2-218ENST00000637258 LOC102724428A0A0B4J2F2 783 aa21.95■■□□□ 1.1
CLCN2-218ENST00000637258 GIGYF1O75420 1035 aaPredicted RBP21.95■■□□□ 1.1
CLCN2-218ENST00000637258 SSFA2P28290 1259 aa21.95■■□□□ 1.1
CLCN2-218ENST00000637258 SIK1P57059 783 aa21.95■■□□□ 1.1
CLCN2-218ENST00000637258 PKD1L3Q7Z443 1732 aa21.94■■□□□ 1.1
CLCN2-218ENST00000637258 SENP3-EIF4A1A0A087X0R7 540 aa21.94■■□□□ 1.1
CLCN2-218ENST00000637258 TMOD3Q9NYL9 352 aa21.94■■□□□ 1.1
CLCN2-218ENST00000637258 TAF1LQ8IZX4 1826 aa21.92■■□□□ 1.1
CLCN2-218ENST00000637258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.92■■□□□ 1.1
CLCN2-218ENST00000637258 PHKG2P15735 406 aa21.92■■□□□ 1.1
CLCN2-218ENST00000637258 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
CLCN2-218ENST00000637258 ITGB4P16144 1822 aa21.91■■□□□ 1.1
CLCN2-218ENST00000637258 C4BP0C0L5 1744 aa21.91■■□□□ 1.1
CLCN2-218ENST00000637258 ANKRD26Q9UPS8 1709 aa21.91■■□□□ 1.1
CLCN2-218ENST00000637258 MAP2P11137 1827 aaKnown RBP21.89■■□□□ 1.09
CLCN2-218ENST00000637258 TOGARAM1Q9Y4F4 1720 aa21.89■■□□□ 1.09
CLCN2-218ENST00000637258 HSP90AB1P08238 724 aaKnown RBP21.88■■□□□ 1.09
CLCN2-218ENST00000637258 ATP6V1AP38606 617 aa21.88■■□□□ 1.09
CLCN2-218ENST00000637258 EIF4A2Q14240 407 aaKnown RBP21.88■■□□□ 1.09
CLCN2-218ENST00000637258 AMIGO3Q86WK7 504 aa21.88■■□□□ 1.09
CLCN2-218ENST00000637258 LINC00116Q8NCU8 138 aa21.88■■□□□ 1.09
CLCN2-218ENST00000637258 ASAP1Q9ULH1 1129 aa21.88■■□□□ 1.09
CLCN2-218ENST00000637258 ERVV-2B6SEH9 535 aa21.87■■□□□ 1.09
CLCN2-218ENST00000637258 PHF14O94880 888 aa21.87■■□□□ 1.09
CLCN2-218ENST00000637258 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
CLCN2-218ENST00000637258 ITPK1Q13572 414 aa21.85■■□□□ 1.09
CLCN2-218ENST00000637258 IGSF1Q8N6C5 1336 aa21.84■■□□□ 1.09
CLCN2-218ENST00000637258 UBR3Q6ZT12 1888 aa21.84■■□□□ 1.09
CLCN2-218ENST00000637258 GNPATO15228 680 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms