RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 TFCP2L1Q9NZI6 479 aa25.54■■□□□ 1.68
CTSD-209ENST00000637158 CDCA8Q53HL2 280 aa25.52■■□□□ 1.68
CTSD-209ENST00000637158 ZNF784Q8NCA9 323 aaPredicted RBP25.51■■□□□ 1.67
CTSD-209ENST00000637158 SMG6Q86US8 1419 aaKnown RBP25.51■■□□□ 1.67
CTSD-209ENST00000637158 FYB1O15117 783 aa25.5■■□□□ 1.67
CTSD-209ENST00000637158 FBLN1P23142 703 aa25.5■■□□□ 1.67
CTSD-209ENST00000637158 RAPGEF4Q8WZA2 1011 aa25.5■■□□□ 1.67
CTSD-209ENST00000637158 PNPLA7Q6ZV29 1317 aa25.49■■□□□ 1.67
CTSD-209ENST00000637158 QSER1Q2KHR3 1735 aa25.49■■□□□ 1.67
CTSD-209ENST00000637158 RRS1Q15050 365 aaKnown RBP25.48■■□□□ 1.67
CTSD-209ENST00000637158 NBPF6Q5VWK0 638 aa25.48■■□□□ 1.67
CTSD-209ENST00000637158 NBPF4Q96M43 638 aa25.48■■□□□ 1.67
CTSD-209ENST00000637158 GGNBP2Q9H3C7 697 aa25.48■■□□□ 1.67
CTSD-209ENST00000637158 GPR162Q16538 588 aa25.47■■□□□ 1.67
CTSD-209ENST00000637158 CCNL1Q9UK58 526 aaPredicted RBP25.47■■□□□ 1.67
CTSD-209ENST00000637158 MEGF6O75095 1541 aa25.47■■□□□ 1.67
CTSD-209ENST00000637158 USP47Q96K76 1375 aa25.46■■□□□ 1.67
CTSD-209ENST00000637158 NSD2O96028 1365 aa25.45■■□□□ 1.67
CTSD-209ENST00000637158 KIF24Q5T7B8 1368 aa25.45■■□□□ 1.67
CTSD-209ENST00000637158 GOLGB1Q14789 3259 aaKnown RBP25.45■■□□□ 1.67
CTSD-209ENST00000637158 TATP17735 454 aaPredicted RBP25.45■■□□□ 1.66
CTSD-209ENST00000637158 CHD4Q14839 1912 aa25.43■■□□□ 1.66
CTSD-209ENST00000637158 DOT1LQ8TEK3 1739 aa25.43■■□□□ 1.66
CTSD-209ENST00000637158 KCNQ4P56696 695 aa25.43■■□□□ 1.66
CTSD-209ENST00000637158 KLHL34Q8N239 644 aa25.43■■□□□ 1.66
CTSD-209ENST00000637158 INSRP06213 1382 aa25.43■■□□□ 1.66
CTSD-209ENST00000637158 LY75O60449 1722 aa25.42■■□□□ 1.66
CTSD-209ENST00000637158 FLT4P35916 1363 aa25.42■■□□□ 1.66
CTSD-209ENST00000637158 PCDH11XQ9BZA7 1347 aa25.41■■□□□ 1.66
CTSD-209ENST00000637158 PCDH11YQ9BZA8 1340 aa25.41■■□□□ 1.66
CTSD-209ENST00000637158 HSP90AB2PQ58FF8 381 aa25.4■■□□□ 1.66
CTSD-209ENST00000637158 USHBP1Q8N6Y0 703 aa25.4■■□□□ 1.66
CTSD-209ENST00000637158 RGPD2P0DJD1 1756 aa25.4■■□□□ 1.66
CTSD-209ENST00000637158 SHANK3Q9BYB0 1731 aa25.4■■□□□ 1.66
CTSD-209ENST00000637158 COL24A1Q17RW2 1714 aa25.39■■□□□ 1.65
CTSD-209ENST00000637158 MSH5O43196 834 aa25.38■■□□□ 1.65
CTSD-209ENST00000637158 FLAD1Q8NFF5 587 aa25.38■■□□□ 1.65
CTSD-209ENST00000637158 COL23A1Q86Y22 540 aaPredicted RBP25.35■■□□□ 1.65
CTSD-209ENST00000637158 PELP1Q8IZL8 1130 aaKnown RBP25.35■■□□□ 1.65
CTSD-209ENST00000637158 GRIN3BO60391 1043 aa25.34■■□□□ 1.65
CTSD-209ENST00000637158 TRIM26Q12899 539 aaPredicted RBP25.33■■□□□ 1.65
CTSD-209ENST00000637158 MPRIPQ6WCQ1 1025 aa25.33■■□□□ 1.65
CTSD-209ENST00000637158 SMARCC1Q92922 1105 aaPredicted RBP25.33■■□□□ 1.65
CTSD-209ENST00000637158 TUBGCP6Q96RT7 1819 aa25.33■■□□□ 1.64
CTSD-209ENST00000637158 TIMELESSQ9UNS1 1208 aa25.32■■□□□ 1.64
CTSD-209ENST00000637158 PALLDQ8WX93 1383 aa25.31■■□□□ 1.64
CTSD-209ENST00000637158 C1QTNF8P60827 252 aa25.31■■□□□ 1.64
CTSD-209ENST00000637158 NLGN2Q8NFZ4 835 aa25.31■■□□□ 1.64
CTSD-209ENST00000637158 KIF20BQ96Q89 1820 aa25.3■■□□□ 1.64
CTSD-209ENST00000637158 CYP27B1O15528 508 aa25.3■■□□□ 1.64
CTSD-209ENST00000637158 CARD14Q9BXL6 1004 aa25.3■■□□□ 1.64
CTSD-209ENST00000637158 SPG7Q9UQ90 795 aa25.29■■□□□ 1.64
CTSD-209ENST00000637158 CD2APQ9Y5K6 639 aa25.28■■□□□ 1.64
CTSD-209ENST00000637158 EMILIN1Q9Y6C2 1016 aa25.28■■□□□ 1.64
CTSD-209ENST00000637158 NSD3Q9BZ95 1437 aa25.28■■□□□ 1.64
CTSD-209ENST00000637158 PPM1GO15355 546 aaPredicted RBP25.27■■□□□ 1.64
CTSD-209ENST00000637158 NKX1-1Q15270 411 aaPredicted RBP25.27■■□□□ 1.64
CTSD-209ENST00000637158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.26■■□□□ 1.63
CTSD-209ENST00000637158 WASHC2AQ641Q2 1341 aa25.26■■□□□ 1.63
CTSD-209ENST00000637158 AK7Q96M32 723 aa25.25■■□□□ 1.63
CTSD-209ENST00000637158 C5P01031 1676 aa25.25■■□□□ 1.63
CTSD-209ENST00000637158 SENP3-EIF4A1A0A087X0R7 540 aa25.24■■□□□ 1.63
CTSD-209ENST00000637158 GIGYF1O75420 1035 aaPredicted RBP25.24■■□□□ 1.63
CTSD-209ENST00000637158 MSL1Q68DK7 614 aa25.24■■□□□ 1.63
CTSD-209ENST00000637158 NCAPD2Q15021 1401 aa25.23■■□□□ 1.63
CTSD-209ENST00000637158 PIGBQ92521 554 aa25.22■■□□□ 1.63
CTSD-209ENST00000637158 YBX3P16989 372 aaKnown RBP eCLIP25.21■■□□□ 1.631e-8■□□□□ 8.7
CTSD-209ENST00000637158 PKD1L3Q7Z443 1732 aa25.2■■□□□ 1.62
CTSD-209ENST00000637158 IFNL2Q8IZJ0 200 aa25.19■■□□□ 1.62
CTSD-209ENST00000637158 EYA1Q99502 592 aa25.19■■□□□ 1.62
CTSD-209ENST00000637158 TMOD3Q9NYL9 352 aa25.19■■□□□ 1.62
CTSD-209ENST00000637158 TAF1LQ8IZX4 1826 aa25.19■■□□□ 1.62
CTSD-209ENST00000637158 SSFA2P28290 1259 aa25.18■■□□□ 1.62
CTSD-209ENST00000637158 C4BP0C0L5 1744 aa25.17■■□□□ 1.62
CTSD-209ENST00000637158 LOC102724428A0A0B4J2F2 783 aa25.17■■□□□ 1.62
CTSD-209ENST00000637158 SIK1P57059 783 aa25.17■■□□□ 1.62
CTSD-209ENST00000637158 POLKQ9UBT6 870 aa25.17■■□□□ 1.62
CTSD-209ENST00000637158 PLEKHG2Q9H7P9 1386 aa25.17■■□□□ 1.62
CTSD-209ENST00000637158 ITGB4P16144 1822 aa25.16■■□□□ 1.62
CTSD-209ENST00000637158 CLSPNQ9HAW4 1339 aa25.16■■□□□ 1.62
CTSD-209ENST00000637158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.16■■□□□ 1.62
CTSD-209ENST00000637158 TOGARAM1Q9Y4F4 1720 aa25.15■■□□□ 1.62
CTSD-209ENST00000637158 ANKRD26Q9UPS8 1709 aa25.15■■□□□ 1.62
CTSD-209ENST00000637158 PHF14O94880 888 aa25.14■■□□□ 1.62
CTSD-209ENST00000637158 PHKG2P15735 406 aa25.14■■□□□ 1.62
CTSD-209ENST00000637158 MAP2P11137 1827 aaKnown RBP25.12■■□□□ 1.61
CTSD-209ENST00000637158 ATP6V1AP38606 617 aa25.11■■□□□ 1.61
CTSD-209ENST00000637158 LINC00116Q8NCU8 138 aa25.11■■□□□ 1.61
CTSD-209ENST00000637158 ASAP1Q9ULH1 1129 aa25.1■■□□□ 1.61
CTSD-209ENST00000637158 HSP90AB1P08238 724 aaKnown RBP25.09■■□□□ 1.61
CTSD-209ENST00000637158 EIF4A2Q14240 407 aaKnown RBP25.09■■□□□ 1.61
CTSD-209ENST00000637158 AMIGO3Q86WK7 504 aa25.09■■□□□ 1.61
CTSD-209ENST00000637158 POLR3GLQ9BT43 218 aa25.09■■□□□ 1.61
CTSD-209ENST00000637158 UBR3Q6ZT12 1888 aa25.09■■□□□ 1.61
CTSD-209ENST00000637158 GNPATO15228 680 aa25.08■■□□□ 1.61
CTSD-209ENST00000637158 ATG3Q9NT62 314 aa25.08■■□□□ 1.61
CTSD-209ENST00000637158 ERVV-2B6SEH9 535 aa25.07■■□□□ 1.6
CTSD-209ENST00000637158 CEP350Q5VT06 3117 aa25.07■■□□□ 1.6
CTSD-209ENST00000637158 IGSF1Q8N6C5 1336 aa25.07■■□□□ 1.6
CTSD-209ENST00000637158 ATP10DQ9P241 1426 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms