RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 GTF2A1P52655 376 aaPredicted RBP13.25□□□□□ -0.29
SMARCA2-258ENST00000637103 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.25□□□□□ -0.29
SMARCA2-258ENST00000637103 ERICH3Q5RHP9 1530 aa13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 RAD21O60216 631 aa13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 EZRP15311 586 aaKnown RBP13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 IMMTQ16891 758 aaKnown RBP13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 TRERF1Q96PN7 1200 aa13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 CCDC171Q6TFL3 1326 aa13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 IVLP07476 585 aa13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 BBXQ8WY36 941 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 SH2B1Q9NRF2 756 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 ERBINQ96RT1 1412 aa13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 DDX19AQ9NUU7 478 aaKnown RBP13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 CTDP1Q9Y5B0 961 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 CADPSQ9ULU8 1353 aa13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 KIAA1107Q9UPP5 1409 aa13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 NKTRP30414 1462 aaKnown RBP13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 HS1BP3Q53T59 392 aa13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 SMARCC1Q92922 1105 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-258ENST00000637103 CAVIN2O95810 425 aa13.23□□□□□ -0.29
SMARCA2-258ENST00000637103 KIF4BQ2VIQ3 1234 aa13.23□□□□□ -0.29
SMARCA2-258ENST00000637103 CEP135Q66GS9 1140 aa13.23□□□□□ -0.29
SMARCA2-258ENST00000637103 TOP1P11387 765 aaKnown RBP13.23□□□□□ -0.29
SMARCA2-258ENST00000637103 XRCC6P12956 609 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMARCA2-258ENST00000637103 LRSAM1Q6UWE0 723 aa13.23□□□□□ -0.29
SMARCA2-258ENST00000637103 KDM4AO75164 1064 aa13.23□□□□□ -0.29
SMARCA2-258ENST00000637103 BAG4O95429 457 aaKnown RBP13.23□□□□□ -0.29
SMARCA2-258ENST00000637103 MAP2K1Q02750 393 aaPredicted RBP13.23□□□□□ -0.29
SMARCA2-258ENST00000637103 ZNF397Q8NF99 534 aaPredicted RBP13.23□□□□□ -0.29
SMARCA2-258ENST00000637103 NBPF8Q3BBV2 869 aa13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 ZSCAN23Q3MJ62 389 aa13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 SMAP1Q8IYB5 467 aaPredicted RBP13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 SLC4A2P04920 1241 aa13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 SLC3A2P08195 630 aaKnown RBP13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 TBC1D32Q96NH3 1257 aa13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 SMARCA4P51532 1647 aa13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 LMAN1P49257 510 aa13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 GOLGA6L10A0A0M3HER8 536 aa13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 CASTP20810 708 aaKnown RBP13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 GBP2P32456 591 aaPredicted RBP13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 WASF1Q92558 559 aa13.22□□□□□ -0.29
SMARCA2-258ENST00000637103 RNF187Q5TA31 235 aaPredicted RBP13.21□□□□□ -0.29
SMARCA2-258ENST00000637103 TANGO6Q9C0B7 1094 aa13.21□□□□□ -0.29
SMARCA2-258ENST00000637103 AIMP1Q12904 312 aaKnown RBP13.21□□□□□ -0.29
SMARCA2-258ENST00000637103 DNAAF4Q8WXU2 420 aa13.21□□□□□ -0.29
SMARCA2-258ENST00000637103 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
SMARCA2-258ENST00000637103 KRT18P05783 430 aaKnown RBP13.21□□□□□ -0.3
SMARCA2-258ENST00000637103 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.3
SMARCA2-258ENST00000637103 LRPPRCP42704 1394 aaKnown RBP13.21□□□□□ -0.3
SMARCA2-258ENST00000637103 EIF5P55010 431 aaKnown RBP13.21□□□□□ -0.3
SMARCA2-258ENST00000637103 CABP2Q9NPB3 220 aa13.21□□□□□ -0.3
SMARCA2-258ENST00000637103 FBXO3Q9UK99 471 aa13.21□□□□□ -0.3
SMARCA2-258ENST00000637103 CCDC69A6NI79 296 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 NOLC1Q14978 699 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 SPA17Q15506 151 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 ANKRD62A6NC57 917 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 IRX3P78415 501 aaPredicted RBP13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 CCDC158Q5M9N0 1113 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 TICAM2Q86XR7 235 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 JPH4Q96JJ6 628 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 CTNNA3Q9UI47 895 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 ZKSCAN5Q9Y2L8 839 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 CCDC57Q2TAC2 916 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 STX1AQ16623 288 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 CTR9Q6PD62 1173 aa13.2□□□□□ -0.3
SMARCA2-258ENST00000637103 TUBB4AP04350 444 aa13.19□□□□□ -0.3
SMARCA2-258ENST00000637103 TTC39AQ5SRH9 613 aa13.19□□□□□ -0.3
SMARCA2-258ENST00000637103 CWC27Q6UX04 472 aaKnown RBP13.19□□□□□ -0.3
SMARCA2-258ENST00000637103 LUZP1Q86V48 1076 aa13.19□□□□□ -0.3
SMARCA2-258ENST00000637103 IPO4Q8TEX9 1081 aaKnown RBP13.19□□□□□ -0.3
SMARCA2-258ENST00000637103 MAP4K4O95819 1239 aaPredicted RBP13.19□□□□□ -0.3
SMARCA2-258ENST00000637103 TRMT1Q9NXH9 659 aaKnown RBP13.19□□□□□ -0.3
SMARCA2-258ENST00000637103 MNAT1P51948 309 aa13.19□□□□□ -0.3
SMARCA2-258ENST00000637103 IGF1RP08069 1367 aa13.18□□□□□ -0.3
SMARCA2-258ENST00000637103 ZSCAN25Q6NSZ9 544 aa13.18□□□□□ -0.3
SMARCA2-258ENST00000637103 ANKRD30BQ9BXX2 1392 aa13.18□□□□□ -0.3
SMARCA2-258ENST00000637103 ALDH1L2Q3SY69 923 aa13.18□□□□□ -0.3
SMARCA2-258ENST00000637103 CCDC91Q7Z6B0 441 aa13.18□□□□□ -0.3
SMARCA2-258ENST00000637103 DHX37Q8IY37 1157 aaKnown RBP13.18□□□□□ -0.3
SMARCA2-258ENST00000637103 NF2P35240 595 aa13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 UBE2HP62256 183 aa13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 SMC1AQ14683 1233 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 C20orf194Q5TEA3 1177 aa13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 GIGYF2Q6Y7W6 1299 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 FYB1O15117 783 aa13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 NACAP1Q9BZK3 213 aa13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 STK11IPQ8N1F8 1099 aa13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 LIMCH1Q9UPQ0 1083 aa13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 GCOM1H8Y6P7 765 aaPredicted RBP13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 MYZAPP0CAP1 466 aa13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 PAFAH1B1P43034 410 aa13.17□□□□□ -0.3
SMARCA2-258ENST00000637103 MX1P20591 662 aa13.16□□□□□ -0.3
SMARCA2-258ENST00000637103 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMARCA2-258ENST00000637103 ZNF644Q9H582 1327 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms