RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 NUTM2GQ5VZR2 741 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 DPY19L2Q6NUT2 758 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 SYTL4Q96C24 671 aaPredicted RBP2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 CAPNS2Q96L46 248 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 GPR101Q96P66 508 aaPredicted RBP2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 ARFGEF1Q9Y6D6 1849 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 SPATA31E1Q6ZUB1 1445 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 CACNA1AO00555 2505 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 COL18A1P39060 1754 aa2.74□□□□□ -1.97
SYNGAP1-215ENST00000636443 THSD7BQ9C0I4 1608 aa2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 RASSF10A6NK89 507 aa2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 PHF14O94880 888 aa2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 CSB-PGBD3P0DP91 1061 aa2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 HOXD11P31277 338 aaPredicted RBP2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 RASSF7Q02833 373 aa2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 CYP4F22Q6NT55 531 aa2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 WAPLQ7Z5K2 1190 aa2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 CDCA7Q9BWT1 371 aaPredicted RBP2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 CCNL1Q9UK58 526 aaPredicted RBP2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 SBF1O95248 1867 aa2.73□□□□□ -1.97
SYNGAP1-215ENST00000636443 PRR36Q9H6K5 1346 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 ZC3H4Q9UPT8 1303 aaKnown RBP2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 COL5A2P05997 1499 aaPredicted RBP2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 LAMB4A4D0S4 1761 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 BCL9O00512 1426 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 PPEF1O14829 653 aaPredicted RBP2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 AOC2O75106 756 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 POTEIP0CG38 1075 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 POTEJP0CG39 1038 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 DPEP1P16444 411 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 TGFB2P61812 414 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 EEA1Q15075 1411 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 DALRD3Q5D0E6 543 aaKnown RBP2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 CEP162Q5TB80 1403 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 CHRDL2Q6WN34 429 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 SMIM5Q71RC9 77 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 LDHDQ86WU2 507 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 NGDNQ8NEJ9 315 aaKnown RBP2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 FLAD1Q8NFF5 587 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 HPS5Q9UPZ3 1129 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 E9PCH4 1651 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 C5P01031 1676 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 LMO7Q8WWI1 1683 aa2.72□□□□□ -1.97
SYNGAP1-215ENST00000636443 PASKQ96RG2 1323 aa2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 ACIN1Q9UKV3 1341 aaKnown RBP2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 CCDC88AQ3V6T2 1871 aa2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 LMNB1P20700 586 aa2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 SAFB2Q14151 953 aaKnown RBP eCLIP2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 CTU1Q7Z7A3 348 aaKnown RBP2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 AK7Q96M32 723 aa2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 PIM2Q9P1W9 311 aa2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 CHIC2Q9UKJ5 165 aa2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 HDAC9Q9UKV0 1011 aa2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 USP54Q70EL1 1684 aa2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 BRCA1P38398 1863 aaKnown RBP2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 KIAA1551Q9HCM1 1747 aa2.71□□□□□ -1.98
SYNGAP1-215ENST00000636443 KIF1BO60333 1816 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 KIF13BQ9NQT8 1826 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 ABCC6O95255 1503 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 IQCA1LA6NCM1 817 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 MMP10P09238 476 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 MAP2K2P36507 400 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 BRPF1P55201 1214 aaPredicted RBP2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 CIAPIN1Q6FI81 312 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 ANKRD13DQ6ZTN6 518 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 CCDC87Q9NVE4 849 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 ANKRD30AQ9BXX3 1397 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 PLEKHH1Q9ULM0 1364 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 LY75O60449 1722 aa2.7□□□□□ -1.98
SYNGAP1-215ENST00000636443 QRICH2Q9H0J4 1663 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 PPLO60437 1756 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 MYOM3Q5VTT5 1437 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 NSD3Q9BZ95 1437 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 DOT1LQ8TEK3 1739 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 POTECB2RU33 542 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 H0YGN5 161 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 VGFO15240 615 aaPredicted RBP2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 MAP3K12Q12852 859 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 AKAP4Q5JQC9 854 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 MAP1SQ66K74 1059 aaPredicted RBP2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 ALYREFQ86V81 257 aaKnown RBP2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 CNTROBQ8N137 903 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 DEFB123Q8N688 67 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 COL26A1Q96A83 441 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 DCAF5Q96JK2 942 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 RBM27Q9P2N5 1060 aaKnown RBP2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 HCN4Q9Y3Q4 1203 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 USP47Q96K76 1375 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 A0A0C4DFX4 3053 aa2.69□□□□□ -1.98
SYNGAP1-215ENST00000636443 ACEP12821 1306 aa2.68□□□□□ -1.98
SYNGAP1-215ENST00000636443 WDR17Q8IZU2 1322 aa2.68□□□□□ -1.98
SYNGAP1-215ENST00000636443 PPIP5K1Q6PFW1 1433 aa2.68□□□□□ -1.98
SYNGAP1-215ENST00000636443 ANKARQ7Z5J8 1434 aa2.68□□□□□ -1.98
SYNGAP1-215ENST00000636443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.68□□□□□ -1.98
SYNGAP1-215ENST00000636443 TRPA1O75762 1119 aa2.68□□□□□ -1.98
SYNGAP1-215ENST00000636443 DDNO94850 711 aaPredicted RBP2.68□□□□□ -1.98
SYNGAP1-215ENST00000636443 ITGBL1O95965 494 aaPredicted RBP2.68□□□□□ -1.98
SYNGAP1-215ENST00000636443 HMGB2P26583 209 aaKnown RBP2.68□□□□□ -1.98
SYNGAP1-215ENST00000636443 PKN2Q16513 984 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms