RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 TOGARAM1Q9Y4F4 1720 aa7.14□□□□□ -1.27
CHD2-224ENST00000636410 U2SURPO15042 1029 aaKnown RBP7.13□□□□□ -1.27
CHD2-224ENST00000636410 TATP17735 454 aaPredicted RBP7.13□□□□□ -1.27
CHD2-224ENST00000636410 SULT6B1Q6IMI4 303 aa7.13□□□□□ -1.27
CHD2-224ENST00000636410 ILDR2Q71H61 639 aa7.13□□□□□ -1.27
CHD2-224ENST00000636410 KRT27Q7Z3Y8 459 aa7.13□□□□□ -1.27
CHD2-224ENST00000636410 ADAMTS7Q9UKP4 1686 aa7.12□□□□□ -1.27
CHD2-224ENST00000636410 PCDH11XQ9BZA7 1347 aa7.12□□□□□ -1.27
CHD2-224ENST00000636410 PCDH11YQ9BZA8 1340 aa7.12□□□□□ -1.27
CHD2-224ENST00000636410 DLG5Q8TDM6 1919 aa7.12□□□□□ -1.27
CHD2-224ENST00000636410 EXOC5O00471 708 aa7.12□□□□□ -1.27
CHD2-224ENST00000636410 PDE3BQ13370 1112 aa7.12□□□□□ -1.27
CHD2-224ENST00000636410 AEBP1Q8IUX7 1158 aa7.12□□□□□ -1.27
CHD2-224ENST00000636410 ITGB4P16144 1822 aa7.12□□□□□ -1.27
CHD2-224ENST00000636410 RGPD3A6NKT7 1758 aaPredicted RBP7.12□□□□□ -1.27
CHD2-224ENST00000636410 RGPD4Q7Z3J3 1758 aa7.12□□□□□ -1.27
CHD2-224ENST00000636410 SCN11AQ9UI33 1791 aa7.12□□□□□ -1.27
CHD2-224ENST00000636410 BCL9O00512 1426 aa7.11□□□□□ -1.27
CHD2-224ENST00000636410 HMOX1P09601 288 aa7.11□□□□□ -1.27
CHD2-224ENST00000636410 U2AF1L5P0DN76 240 aaPredicted RBP7.11□□□□□ -1.27
CHD2-224ENST00000636410 U2AF1Q01081 240 aaKnown RBP eCLIP7.11□□□□□ -1.27
CHD2-224ENST00000636410 DIEXFQ68CQ4 756 aaKnown RBP7.11□□□□□ -1.27
CHD2-224ENST00000636410 ZCRB1Q8TBF4 217 aaKnown RBP7.11□□□□□ -1.27
CHD2-224ENST00000636410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.11□□□□□ -1.273e-17■□□□□ 9.4
CHD2-224ENST00000636410 SPG7Q9UQ90 795 aa7.11□□□□□ -1.27
CHD2-224ENST00000636410 BTAF1O14981 1849 aa7.11□□□□□ -1.27
CHD2-224ENST00000636410 AMOTQ4VCS5 1084 aa7.1□□□□□ -1.27
CHD2-224ENST00000636410 MARCH10Q8NA82 808 aaPredicted RBP7.1□□□□□ -1.27
CHD2-224ENST00000636410 RSPH6AQ9H0K4 717 aa7.1□□□□□ -1.27
CHD2-224ENST00000636410 SIPA1L3O60292 1781 aaPredicted RBP7.1□□□□□ -1.27
CHD2-224ENST00000636410 FCHSD2O94868 740 aa7.09□□□□□ -1.27
CHD2-224ENST00000636410 PRKAR2BP31323 418 aa7.09□□□□□ -1.27
CHD2-224ENST00000636410 WDR43Q15061 677 aaKnown RBP eCLIP7.09□□□□□ -1.27
CHD2-224ENST00000636410 PLEKHO1Q53GL0 409 aaPredicted RBP7.09□□□□□ -1.27
CHD2-224ENST00000636410 FAM182BQ5T319 152 aa7.09□□□□□ -1.27
CHD2-224ENST00000636410 FAM196AQ6ZSG2 479 aa7.09□□□□□ -1.27
CHD2-224ENST00000636410 DDX54Q8TDD1 881 aaKnown RBP7.09□□□□□ -1.27
CHD2-224ENST00000636410 MRS2Q9HD23 443 aa7.09□□□□□ -1.27
CHD2-224ENST00000636410 MRC1P22897 1456 aa7.09□□□□□ -1.27
CHD2-224ENST00000636410 RREB1Q92766 1687 aa7.09□□□□□ -1.27
CHD2-224ENST00000636410 PAPPAQ13219 1627 aa7.09□□□□□ -1.28
CHD2-224ENST00000636410 LY75O60449 1722 aa7.08□□□□□ -1.28
CHD2-224ENST00000636410 CYP27B1O15528 508 aa7.08□□□□□ -1.28
CHD2-224ENST00000636410 PHKG2P15735 406 aa7.08□□□□□ -1.28
CHD2-224ENST00000636410 CCDC184Q52MB2 194 aa7.08□□□□□ -1.28
CHD2-224ENST00000636410 IFNL2Q8IZJ0 200 aa7.08□□□□□ -1.28
CHD2-224ENST00000636410 PNNQ9H307 717 aaKnown RBP7.08□□□□□ -1.28
CHD2-224ENST00000636410 KDM6AO15550 1401 aaPredicted RBP7.08□□□□□ -1.28
CHD2-224ENST00000636410 MAP3K5Q99683 1374 aa7.08□□□□□ -1.28
CHD2-224ENST00000636410 MAPK8IP3Q9UPT6 1336 aa7.07□□□□□ -1.28
CHD2-224ENST00000636410 NEFMP07197 916 aa7.07□□□□□ -1.28
CHD2-224ENST00000636410 HSP90AB1P08238 724 aaKnown RBP7.07□□□□□ -1.28
CHD2-224ENST00000636410 MTHFSDQ2M296 383 aaKnown RBP7.07□□□□□ -1.28
CHD2-224ENST00000636410 AKAP4Q5JQC9 854 aa7.07□□□□□ -1.28
CHD2-224ENST00000636410 C1orf141Q5JVX7 400 aa7.07□□□□□ -1.28
CHD2-224ENST00000636410 ZNF530Q6P9A1 599 aaPredicted RBP7.07□□□□□ -1.28
CHD2-224ENST00000636410 GAS2L2Q8NHY3 880 aa7.07□□□□□ -1.28
CHD2-224ENST00000636410 PLEKHF1Q96S99 279 aa7.07□□□□□ -1.28
CHD2-224ENST00000636410 CICQ96RK0 1608 aaPredicted RBP7.06□□□□□ -1.28
CHD2-224ENST00000636410 CCER2I3L3R5 266 aa7.06□□□□□ -1.28
CHD2-224ENST00000636410 NKX1-1Q15270 411 aaPredicted RBP7.06□□□□□ -1.28
CHD2-224ENST00000636410 PNISRQ8TF01 805 aaKnown RBP7.06□□□□□ -1.28
CHD2-224ENST00000636410 PHACTR3Q96KR7 559 aa7.06□□□□□ -1.28
CHD2-224ENST00000636410 ADAMTS8Q9UP79 889 aa7.06□□□□□ -1.28
CHD2-224ENST00000636410 NUP188Q5SRE5 1749 aa7.06□□□□□ -1.28
CHD2-224ENST00000636410 ZNF831Q5JPB2 1677 aa7.06□□□□□ -1.28
CHD2-224ENST00000636410 KDM3BQ7LBC6 1761 aa7.05□□□□□ -1.28
CHD2-224ENST00000636410 UBR2Q8IWV8 1755 aa7.05□□□□□ -1.28
CHD2-224ENST00000636410 CCDC125Q86Z20 511 aa7.05□□□□□ -1.28
CHD2-224ENST00000636410 UPF1Q92900 1129 aaKnown RBP eCLIP7.05□□□□□ -1.28
CHD2-224ENST00000636410 RUNDC1Q96C34 613 aa7.05□□□□□ -1.28
CHD2-224ENST00000636410 ACSBG1Q96GR2 724 aa7.05□□□□□ -1.28
CHD2-224ENST00000636410 DCAF5Q96JK2 942 aa7.05□□□□□ -1.28
CHD2-224ENST00000636410 BCL11BQ9C0K0 894 aaPredicted RBP7.05□□□□□ -1.28
CHD2-224ENST00000636410 C5P01031 1676 aa7.05□□□□□ -1.28
CHD2-224ENST00000636410 GNAT3A8MTJ3 354 aa7.04□□□□□ -1.28
CHD2-224ENST00000636410 SOCS7O14512 581 aa7.04□□□□□ -1.28
CHD2-224ENST00000636410 KCNQ2O43526 872 aa7.04□□□□□ -1.28
CHD2-224ENST00000636410 TRIM37O94972 964 aa7.04□□□□□ -1.28
CHD2-224ENST00000636410 SF3B2Q13435 895 aaKnown RBP7.04□□□□□ -1.28
CHD2-224ENST00000636410 NFE2L2Q16236 605 aa7.04□□□□□ -1.28
CHD2-224ENST00000636410 MPRIPQ6WCQ1 1025 aa7.04□□□□□ -1.28
CHD2-224ENST00000636410 CCDC146Q8IYE0 955 aa7.04□□□□□ -1.28
CHD2-224ENST00000636410 MIER1Q8N108 512 aa7.04□□□□□ -1.28
CHD2-224ENST00000636410 CEMIPQ8WUJ3 1361 aa7.04□□□□□ -1.28
CHD2-224ENST00000636410 TJP1Q07157 1748 aa7.04□□□□□ -1.28
CHD2-224ENST00000636410 TAF1LQ8IZX4 1826 aa7.04□□□□□ -1.28
CHD2-224ENST00000636410 EP400Q96L91 3159 aa7.03□□□□□ -1.28
CHD2-224ENST00000636410 ERVV-2B6SEH9 535 aa7.03□□□□□ -1.28
CHD2-224ENST00000636410 RNMTO43148 476 aaKnown RBP7.03□□□□□ -1.28
CHD2-224ENST00000636410 HTATSF1O43719 755 aaKnown RBP7.03□□□□□ -1.28
CHD2-224ENST00000636410 PRIM1P49642 420 aaKnown RBP7.03□□□□□ -1.28
CHD2-224ENST00000636410 SYTL4Q96C24 671 aaPredicted RBP7.03□□□□□ -1.28
CHD2-224ENST00000636410 TMOD3Q9NYL9 352 aa7.03□□□□□ -1.28
CHD2-224ENST00000636410 COL5A3P25940 1745 aaPredicted RBP7.03□□□□□ -1.28
CHD2-224ENST00000636410 LAMB4A4D0S4 1761 aa7.03□□□□□ -1.28
CHD2-224ENST00000636410 KAT6BQ8WYB5 2073 aa7.02□□□□□ -1.29
CHD2-224ENST00000636410 APBA3O96018 575 aa7.02□□□□□ -1.29
CHD2-224ENST00000636410 TMPOP42166 694 aaKnown RBP7.02□□□□□ -1.29
CHD2-224ENST00000636410 BAG6P46379 1132 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms