RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	RIPK4	P57078	832 aa		13.54	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	MED1	Q15648	1581 aa	Predicted RBP	13.54	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	RTL1	A6NKG5	1358 aa		13.54	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	TOM1	O60784	492 aa		13.54	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	TRIM35	Q9UPQ4	493 aa		13.54	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	USP54	Q70EL1	1684 aa		13.53	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	CT47B1	P0C2W7	299 aa	Predicted RBP	13.53	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	C8orf34	Q49A92	452 aa		13.53	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	IQSEC2	Q5JU85	1478 aa		13.53	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	CHRNA2	Q15822	529 aa		13.52	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	NBPF6	Q5VWK0	638 aa		13.52	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	NBPF4	Q96M43	638 aa		13.52	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	IGSF1	Q8N6C5	1336 aa		13.52	□□□□□ -0.24
ARHGEF9-223	ENST00000636102	ALS2	Q96Q42	1657 aa		13.52	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	USHBP1	Q8N6Y0	703 aa		13.52	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	LRRC59	Q96AG4	307 aa	Known RBP	13.52	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	UBAP1L	F5GYI3	381 aa		13.51	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	NFE2L2	Q16236	605 aa		13.51	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	ANKRD24	Q8TF21	1146 aa		13.51	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	MYH16	Q9H6N6	1097 aa		13.51	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	HAP1	P54257	671 aa	Predicted RBP	13.51	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.51	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	KIAA0232	Q92628	1395 aa		13.5	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	CANX	P27824	592 aa	Known RBP	13.49	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	BCAR3	O75815	825 aa		13.49	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	CLUAP1	Q96AJ1	413 aa		13.48	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	KDR	P35968	1356 aa		13.48	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	MTHFSD	Q2M296	383 aa	Known RBP	13.48	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	CERK	Q8TCT0	537 aa		13.48	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	PRDM11	Q9NQV5	511 aa		13.48	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	RARS	P54136	660 aa	Known RBP	13.47	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	THUMPD2	Q9BTF0	503 aa	Known RBP	13.47	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	PODXL2	Q9NZ53	605 aa		13.47	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	CPD	O75976	1380 aa		13.47	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	FAM83G	A6ND36	823 aa		13.46	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	ERBB3	P21860	1342 aa		13.46	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	ROBO1	Q9Y6N7	1651 aa		13.46	□□□□□ -0.25
ARHGEF9-223	ENST00000636102	DCTN1	Q14203	1278 aa		13.46	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	FSD2	A1L4K1	749 aa		13.45	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	BECN1	Q14457	450 aa		13.45	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	NLRP2	Q9NX02	1062 aa		13.45	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	IL16	Q14005	1332 aa		13.45	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	CSB-PGBD3	P0DP91	1061 aa		13.45	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	NHSL1	Q5SYE7	1610 aa		13.45	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	RGPD1	P0DJD0	1748 aa		13.44	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	TSR2	Q969E8	191 aa	Known RBP	13.43	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	GOLGA6L3	A6NEY3	463 aa		13.43	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	MCM10	Q7L590	875 aa		13.43	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	SKAP1	Q86WV1	359 aa		13.43	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	LTN1	O94822	1766 aa		13.43	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	XRCC6	P12956	609 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	LMOD3	Q0VAK6	560 aa		13.42	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	GAS2L2	Q8NHY3	880 aa		13.42	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.42	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	TPM2	P07951	284 aa		13.42	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.41	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	PDCL3	Q9H2J4	239 aa		13.4	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	RWDD1	Q9H446	243 aa	Predicted RBP	13.4	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	COG6	Q9Y2V7	657 aa		13.4	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	STRN4	Q9NRL3	753 aa		13.4	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	ISY1	Q9ULR0	285 aa	Known RBP	13.4	□□□□□ -0.26
ARHGEF9-223	ENST00000636102	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	NUTM2E	B1AL46	878 aa	Predicted RBP	13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	RGS3	P49796	1198 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	EVA1C	P58658	441 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	CALD1	Q05682	793 aa	Known RBP	13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	RTF1	Q92541	710 aa	Known RBP	13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	GNAT3	A8MTJ3	354 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	ADAMTS2	O95450	1211 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	IGHD	P01880	384 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	ZNF853	P0CG23	659 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	EXOSC9	Q06265	439 aa	Known RBP	13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	ZKSCAN2	Q63HK3	967 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	TOM1L2	Q6ZVM7	507 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	PANK1	Q8TE04	598 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	ZNF428	Q96B54	188 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	ANTXR1	Q9H6X2	564 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	BTG4	Q9NY30	223 aa		13.39	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	CRYBG1	Q9Y4K1	1723 aa		13.38	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	CAMTA1	Q9Y6Y1	1673 aa		13.38	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	LARP1	Q6PKG0	1096 aa	Known RBP	13.38	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	NCAPD2	Q15021	1401 aa		13.38	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	WDR17	Q8IZU2	1322 aa		13.38	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	MRE11	P49959	708 aa		13.37	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	GNAI1	P63096	354 aa		13.37	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	AMOT	Q4VCS5	1084 aa		13.37	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	IL17RE	Q8NFR9	667 aa		13.37	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	RAPGEF4	Q8WZA2	1011 aa		13.37	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	CFAP44	Q96MT7	982 aa		13.37	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	IFT57	Q9NWB7	429 aa		13.37	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	COL18A1	P39060	1754 aa		13.37	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	HTATSF1	O43719	755 aa	Known RBP	13.37	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	MBIP	Q9NS73	344 aa		13.37	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	TAT	P17735	454 aa	Predicted RBP	13.36	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	MVP	Q14764	893 aa	Known RBP	13.36	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.36	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	MIS18A	Q9NYP9	233 aa		13.36	□□□□□ -0.27
ARHGEF9-223	ENST00000636102	DZIP1L	Q8IYY4	767 aa	Known RBP	13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms