RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 USP43Q70EL4 1123 aa-0.11□□□□□ -2.43
CDKL5-210ENST00000636046 DNAJC10Q8IXB1 793 aa-0.11□□□□□ -2.43
CDKL5-210ENST00000636046 PPP1R16BQ96T49 567 aa-0.11□□□□□ -2.43
CDKL5-210ENST00000636046 PDGFDQ9GZP0 370 aaPredicted RBP-0.11□□□□□ -2.43
CDKL5-210ENST00000636046 PCED1AQ9H1Q7 454 aa-0.11□□□□□ -2.43
CDKL5-210ENST00000636046 METTL14Q9HCE5 456 aaKnown RBP-0.11□□□□□ -2.43
CDKL5-210ENST00000636046 PIM2Q9P1W9 311 aa-0.11□□□□□ -2.43
CDKL5-210ENST00000636046 KLF15Q9UIH9 416 aa-0.11□□□□□ -2.43
CDKL5-210ENST00000636046 HRH3Q9Y5N1 445 aa-0.11□□□□□ -2.43
CDKL5-210ENST00000636046 CARMIL2Q6F5E8 1435 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 A0A1W2PNU3 283 aaPredicted RBP-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 PAPLNO95428 1278 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 SKIP12755 728 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 TNFRSF1BP20333 461 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 AMPD1P23109 780 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 PTSQ03393 145 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 CIAPIN1Q6FI81 312 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 HHIPL2Q6UWX4 724 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 MICALCLQ6ZW33 695 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 SLC51AQ86UW1 340 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 DTX1Q86Y01 620 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 CCDC155Q8N6L0 562 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 NACC1Q96RE7 527 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 VPS33BQ9H267 617 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 MBIPQ9NS73 344 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 STAG3Q9UJ98 1225 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 MUC12Q9UKN1 5478 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 NOTCH1P46531 2555 aa-0.12□□□□□ -2.43
CDKL5-210ENST00000636046 TENM1Q9UKZ4 2725 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 NPIPB6E9PJ23 425 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 FZD7O75084 574 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 SLC34A2O95436 690 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 TGFB1P01137 390 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 HOXB4P17483 251 aaPredicted RBP-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 FSTP19883 344 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 ITGA6P23229 1130 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 ZFP36P26651 326 aaKnown RBP-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 LTKP29376 864 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 GRIK1P39086 918 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 TGFB2P61812 414 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 CCDC142Q17RM4 750 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 KLHL22Q53GT1 634 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 ZKSCAN2Q63HK3 967 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 GDF6Q6KF10 455 aaPredicted RBP-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 INTS5Q6P9B9 1019 aaKnown RBP-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 ZSWIM9Q86XI8 627 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 Q8N1X5 172 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 TMEM255BQ8WV15 326 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 TMEM40Q8WWA1 233 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 MRGPRX2Q96LB1 330 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 ADGRE3Q9BY15 652 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 SEPT9Q9UHD8 586 aaPredicted RBP-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 NOTCH3Q9UM47 2321 aa-0.13□□□□□ -2.43
CDKL5-210ENST00000636046 SPRR5A0A1B0GTR4 108 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 RBAK-RBAKDNI3L0D1 243 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 BIN1O00499 593 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 ALDH1A1P00352 501 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 C1QTNF9P0C862 333 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 APLP1P51693 650 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 NLRP6P59044 892 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 PURAQ00577 322 aaKnown RBP-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 PLP2Q04941 152 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 TROAPQ12815 778 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 KLF10Q13118 480 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 UBAP2LQ14157 1087 aaKnown RBP-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 FAM98CQ17RN3 349 aaKnown RBP-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 PRRT3Q5FWE3 981 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 FOXD4L5Q5VV16 416 aaPredicted RBP-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 FBXL22Q6P050 247 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 KRT77Q7Z794 578 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 MICALL2Q8IY33 904 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 SPEM1Q8N4L4 309 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 FOXD4L4Q8WXT5 416 aaPredicted RBP-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 FAM168AQ92567 244 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 PLVAPQ9BX97 442 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 OXCT2Q9BYC2 517 aaPredicted RBP-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 DNMT3LQ9UJW3 386 aa-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 ING1Q9UK53 422 aaPredicted RBP-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 KLF2Q9Y5W3 355 aaPredicted RBP-0.14□□□□□ -2.43
CDKL5-210ENST00000636046 LRRC10BA6NIK2 292 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 INO80B-WBP1J3KQ70 363 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 NFIBO00712 420 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 TLL1O43897 1013 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 CBFA2T3O75081 653 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 ADH1BP00325 375 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 DGKGP49619 791 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 MRPS21P82921 87 aaKnown RBP-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 FHL3Q13643 280 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 ZNF827Q17R98 1081 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 SWI5Q1ZZU3 235 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 ZNF800Q2TB10 664 aaPredicted RBP eCLIP-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 EML3Q32P44 896 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 PROX2Q3B8N5 592 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 C6orf118Q5T5N4 469 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 SYDE1Q6ZW31 735 aaPredicted RBP-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 Q7L0L9 218 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 TXNRD3Q86VQ6 643 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 SCUBE3Q8IX30 993 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 RASEFQ8IZ41 740 aa-0.15□□□□□ -2.43
CDKL5-210ENST00000636046 C9orf106Q8NAJ2 232 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms