RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 AEBP1Q8IUX7 1158 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 KDM6BO15054 1643 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 H0YHG0 523 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 DAPK1P53355 1430 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 CCDC181Q5TID7 509 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 FERMT1Q9BQL6 677 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 UBAC1Q9BSL1 405 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 NUP153P49790 1475 aaKnown RBP7.45□□□□□ -1.22
GABRB3-218ENST00000635994 CBFA2T2O43439 604 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 SURF6O75683 361 aaKnown RBP7.45□□□□□ -1.22
GABRB3-218ENST00000635994 CCT4P50991 539 aaKnown RBP7.45□□□□□ -1.22
GABRB3-218ENST00000635994 TTLL12Q14166 644 aaPredicted RBP7.45□□□□□ -1.22
GABRB3-218ENST00000635994 HSP90AB3PQ58FF7 597 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 PPP4R3BQ5MIZ7 849 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 ZFYVE16Q7Z3T8 1539 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 DISP1Q96F81 1524 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 ZPR1O75312 459 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.45□□□□□ -1.22
GABRB3-218ENST00000635994 KCNH5Q8NCM2 988 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 CUL5Q93034 780 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 RAB34Q9BZG1 259 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 INCENPQ9NQS7 918 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 CEP126Q9P2H0 1117 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 FAM177BA6PVY3 158 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 PPFIBP1Q86W92 1011 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 IFT57Q9NWB7 429 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 CEP131Q9UPN4 1083 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 ATP10AO60312 1499 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 HMGB1P09429 215 aaKnown RBP7.45□□□□□ -1.22
GABRB3-218ENST00000635994 ANAPC15P60006 121 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 KRT32Q14532 448 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 CAVIN1Q6NZI2 390 aaKnown RBP7.45□□□□□ -1.22
GABRB3-218ENST00000635994 ZNF771Q7L3S4 317 aaPredicted RBP7.45□□□□□ -1.22
GABRB3-218ENST00000635994 CRACR2BQ8N4Y2 399 aaPredicted RBP7.45□□□□□ -1.22
GABRB3-218ENST00000635994 ZHX3Q9H4I2 956 aa7.45□□□□□ -1.22
GABRB3-218ENST00000635994 B4DLN1 442 aa7.44□□□□□ -1.22
GABRB3-218ENST00000635994 UBAP1LF5GYI3 381 aa7.44□□□□□ -1.22
GABRB3-218ENST00000635994 MRPL12P52815 198 aaKnown RBP7.44□□□□□ -1.22
GABRB3-218ENST00000635994 SRCIN1Q9C0H9 1055 aa7.44□□□□□ -1.22
GABRB3-218ENST00000635994 APAF1O14727 1248 aa7.44□□□□□ -1.22
GABRB3-218ENST00000635994 GNAI2P04899 355 aa7.44□□□□□ -1.22
GABRB3-218ENST00000635994 MTERF4Q7Z6M4 381 aaKnown RBP7.44□□□□□ -1.22
GABRB3-218ENST00000635994 TANGO6Q9C0B7 1094 aa7.44□□□□□ -1.22
GABRB3-218ENST00000635994 HOMER2Q9NSB8 354 aa7.44□□□□□ -1.22
GABRB3-218ENST00000635994 SEC63Q9UGP8 760 aaKnown RBP7.44□□□□□ -1.22
GABRB3-218ENST00000635994 COG6Q9Y2V7 657 aa7.44□□□□□ -1.22
GABRB3-218ENST00000635994 KIF4AO95239 1232 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 CAVIN4Q5BKX8 364 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 VPS36Q86VN1 386 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 PHAXQ9H814 394 aaKnown RBP7.43□□□□□ -1.22
GABRB3-218ENST00000635994 AKAP2Q9Y2D5 859 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 DHX29Q7Z478 1369 aaKnown RBP7.43□□□□□ -1.22
GABRB3-218ENST00000635994 USP47Q96K76 1375 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 FGFR1OPO95684 399 aaKnown RBP7.43□□□□□ -1.22
GABRB3-218ENST00000635994 CT47B1P0C2W7 299 aaPredicted RBP7.43□□□□□ -1.22
GABRB3-218ENST00000635994 TTC21AQ8NDW8 1320 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.43□□□□□ -1.22
GABRB3-218ENST00000635994 ERLIN1O75477 346 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 ZNF530Q6P9A1 599 aaPredicted RBP7.43□□□□□ -1.22
GABRB3-218ENST00000635994 TAF4BQ92750 862 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 BCL2L13Q9BXK5 485 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 RAI14Q9P0K7 980 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 RPGRIP1LQ68CZ1 1315 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 A2MP01023 1474 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 TDO2P48775 406 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 ENOX2Q16206 610 aaKnown RBP7.43□□□□□ -1.22
GABRB3-218ENST00000635994 SSX2IPQ9Y2D8 614 aa7.43□□□□□ -1.22
GABRB3-218ENST00000635994 LRPPRCP42704 1394 aaKnown RBP7.42□□□□□ -1.22
GABRB3-218ENST00000635994 LDHCP07864 332 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 IFIT1P09914 478 aaKnown RBP7.42□□□□□ -1.22
GABRB3-218ENST00000635994 HDGFL1Q5TGJ6 251 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 STXBP4Q6ZWJ1 553 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 PPM1EQ8WY54 764 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 RSPH6AQ9H0K4 717 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 CCDC39Q9UFE4 941 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 CCDC196A0A1B0GTZ2 297 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 ATP2B1P20020 1258 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 C16orf71Q8IYS4 520 aaPredicted RBP7.42□□□□□ -1.22
GABRB3-218ENST00000635994 GCC1Q96CN9 775 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 TSPOAP1O95153 1857 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 MTHFSP49914 203 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 RRP1P56182 461 aaKnown RBP7.42□□□□□ -1.22
GABRB3-218ENST00000635994 MAP3K9P80192 1104 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 CETN1Q12798 172 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 DDX54Q8TDD1 881 aaKnown RBP7.42□□□□□ -1.22
GABRB3-218ENST00000635994 MYO1BO43795 1136 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 FOXD4L6Q3SYB3 417 aaPredicted RBP7.42□□□□□ -1.22
GABRB3-218ENST00000635994 FOXD4L3Q6VB84 417 aaPredicted RBP7.42□□□□□ -1.22
GABRB3-218ENST00000635994 CYP46A1Q9Y6A2 500 aa7.42□□□□□ -1.22
GABRB3-218ENST00000635994 A0A087WZG4 1122 aa7.41□□□□□ -1.22
GABRB3-218ENST00000635994 ANKRD18BA2A2Z9 1011 aa7.41□□□□□ -1.22
GABRB3-218ENST00000635994 CLASP1Q7Z460 1538 aa7.41□□□□□ -1.22
GABRB3-218ENST00000635994 LRP2BPQ9P2M1 347 aa7.41□□□□□ -1.22
GABRB3-218ENST00000635994 RBM19Q9Y4C8 960 aaKnown RBP7.41□□□□□ -1.22
GABRB3-218ENST00000635994 NOP2P46087 812 aaKnown RBP7.41□□□□□ -1.22
GABRB3-218ENST00000635994 GIGYF2Q6Y7W6 1299 aaKnown RBP7.41□□□□□ -1.22
GABRB3-218ENST00000635994 ZNF397Q8NF99 534 aaPredicted RBP7.41□□□□□ -1.22
GABRB3-218ENST00000635994 ZSCAN31Q96LW9 406 aaPredicted RBP7.41□□□□□ -1.22
GABRB3-218ENST00000635994 TSG101Q99816 390 aa7.41□□□□□ -1.22
GABRB3-218ENST00000635994 SEPT11Q9NVA2 429 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms