RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 USP17L19D6RCP7 530 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 USP17L20D6RJB6 530 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 ATP5J2-PTCD1G3V325 749 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 PDIA4P13667 645 aaKnown RBP12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 FSHRP23945 695 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 USP17L24Q0WX57 530 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 OXLD1Q5BKU9 147 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 CCDC125Q86Z20 511 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 PCDHB11Q9Y5F2 797 aa12.15□□□□□ -0.46
SMARCA2-239ENST00000635388 TMEM88BA6NKF7 163 aa12.14□□□□□ -0.47
SMARCA2-239ENST00000635388 CLDN10P78369 228 aa12.14□□□□□ -0.47
SMARCA2-239ENST00000635388 PTK7Q13308 1070 aa12.14□□□□□ -0.47
SMARCA2-239ENST00000635388 ZNF697Q5TEC3 545 aa12.14□□□□□ -0.47
SMARCA2-239ENST00000635388 ZNF598Q86UK7 904 aaKnown RBP12.14□□□□□ -0.47
SMARCA2-239ENST00000635388 PKD2L1Q9P0L9 805 aa12.14□□□□□ -0.47
SMARCA2-239ENST00000635388 ERVH48-1M5A8F1 160 aa12.13□□□□□ -0.47
SMARCA2-239ENST00000635388 ARID5BQ14865 1188 aa12.13□□□□□ -0.47
SMARCA2-239ENST00000635388 PRKD2Q9BZL6 878 aa12.13□□□□□ -0.47
SMARCA2-239ENST00000635388 V9GY48 417 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-239ENST00000635388 CARNS1A5YM72 827 aa12.12□□□□□ -0.47
SMARCA2-239ENST00000635388 DKK1O94907 266 aa12.12□□□□□ -0.47
SMARCA2-239ENST00000635388 ADH1CP00326 375 aa12.12□□□□□ -0.47
SMARCA2-239ENST00000635388 CSB-PGBD3P0DP91 1061 aa12.12□□□□□ -0.47
SMARCA2-239ENST00000635388 RAB15P59190 212 aa12.12□□□□□ -0.47
SMARCA2-239ENST00000635388 STK32AQ8WU08 396 aa12.12□□□□□ -0.47
SMARCA2-239ENST00000635388 NOVA2Q9UNW9 492 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-239ENST00000635388 KIAA1024Q9UPX6 916 aa12.12□□□□□ -0.47
SMARCA2-239ENST00000635388 NOD1Q9Y239 953 aa12.12□□□□□ -0.47
SMARCA2-239ENST00000635388 SCTRP47872 440 aa12.11□□□□□ -0.47
SMARCA2-239ENST00000635388 OGFOD1Q8N543 542 aa12.11□□□□□ -0.47
SMARCA2-239ENST00000635388 NR3C2P08235 984 aa12.1□□□□□ -0.47
SMARCA2-239ENST00000635388 RASA1P20936 1047 aa12.1□□□□□ -0.47
SMARCA2-239ENST00000635388 PCDHGA11Q9Y5H2 935 aa12.1□□□□□ -0.47
SMARCA2-239ENST00000635388 URB2Q14146 1524 aaKnown RBP12.1□□□□□ -0.47
SMARCA2-239ENST00000635388 ZBTB7BO15156 539 aaPredicted RBP12.09□□□□□ -0.47
SMARCA2-239ENST00000635388 ERVK-9P63128 1117 aa12.09□□□□□ -0.47
SMARCA2-239ENST00000635388 TMEM164Q5U3C3 297 aa12.09□□□□□ -0.47
SMARCA2-239ENST00000635388 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
SMARCA2-239ENST00000635388 GTF2IP78347 998 aa12.08□□□□□ -0.48
SMARCA2-239ENST00000635388 NR5A1Q13285 461 aa12.08□□□□□ -0.48
SMARCA2-239ENST00000635388 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
SMARCA2-239ENST00000635388 SIX5Q8N196 739 aa12.08□□□□□ -0.48
SMARCA2-239ENST00000635388 TMPRSS4Q9NRS4 437 aa12.08□□□□□ -0.48
SMARCA2-239ENST00000635388 GDF9O60383 454 aa12.07□□□□□ -0.48
SMARCA2-239ENST00000635388 USP4Q13107 963 aa12.07□□□□□ -0.48
SMARCA2-239ENST00000635388 ANKMY2Q8IV38 441 aa12.07□□□□□ -0.48
SMARCA2-239ENST00000635388 CCDC116Q8IYX3 515 aa12.07□□□□□ -0.48
SMARCA2-239ENST00000635388 ZNF594Q96JF6 807 aaPredicted RBP12.07□□□□□ -0.48
SMARCA2-239ENST00000635388 DNAAF2Q9NVR5 837 aaKnown RBP12.07□□□□□ -0.48
SMARCA2-239ENST00000635388 ATP1A2P50993 1020 aa12.06□□□□□ -0.48
SMARCA2-239ENST00000635388 FAM69CQ0P6D2 419 aa12.06□□□□□ -0.48
SMARCA2-239ENST00000635388 FOXC1Q12948 553 aa12.06□□□□□ -0.48
SMARCA2-239ENST00000635388 LARGE2Q8N3Y3 721 aa12.06□□□□□ -0.48
SMARCA2-239ENST00000635388 LILRA1O75019 489 aa12.05□□□□□ -0.48
SMARCA2-239ENST00000635388 DHX9Q08211 1270 aaKnown RBP12.05□□□□□ -0.48
SMARCA2-239ENST00000635388 PDE4CQ08493 712 aa12.05□□□□□ -0.48
SMARCA2-239ENST00000635388 PPP1R26Q5T8A7 1209 aaPredicted RBP12.05□□□□□ -0.48
SMARCA2-239ENST00000635388 TRIM67Q6ZTA4 783 aa12.05□□□□□ -0.48
SMARCA2-239ENST00000635388 ZNF784Q8NCA9 323 aaPredicted RBP12.05□□□□□ -0.48
SMARCA2-239ENST00000635388 SIRT1Q96EB6 747 aa12.05□□□□□ -0.48
SMARCA2-239ENST00000635388 DPYDQ12882 1025 aa12.04□□□□□ -0.48
SMARCA2-239ENST00000635388 TRIM26Q12899 539 aaPredicted RBP12.04□□□□□ -0.48
SMARCA2-239ENST00000635388 CC2D2BQ6DHV5 1058 aa12.04□□□□□ -0.48
SMARCA2-239ENST00000635388 OSBPL3Q9H4L5 887 aa12.04□□□□□ -0.48
SMARCA2-239ENST00000635388 CYLDQ9NQC7 956 aa12.03□□□□□ -0.48
SMARCA2-239ENST00000635388 SLAIN2Q9P270 581 aa12.03□□□□□ -0.48
SMARCA2-239ENST00000635388 ALDH1A1P00352 501 aa12.02□□□□□ -0.49
SMARCA2-239ENST00000635388 SNIP1Q8TAD8 396 aaKnown RBP12.02□□□□□ -0.49
SMARCA2-239ENST00000635388 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
SMARCA2-239ENST00000635388 MYCP01106 439 aaPredicted RBP12.01□□□□□ -0.49
SMARCA2-239ENST00000635388 NNTQ13423 1086 aa12.01□□□□□ -0.49
SMARCA2-239ENST00000635388 CCDC102BQ68D86 513 aa12.01□□□□□ -0.49
SMARCA2-239ENST00000635388 TPCN2Q8NHX9 752 aa12.01□□□□□ -0.49
SMARCA2-239ENST00000635388 TOR4AQ9NXH8 423 aa12.01□□□□□ -0.49
SMARCA2-239ENST00000635388 TOPBP1Q92547 1522 aa12.01□□□□□ -0.49
SMARCA2-239ENST00000635388 FAM200AQ8TCP9 573 aa12□□□□□ -0.49
SMARCA2-239ENST00000635388 J3QL48 77 aa11.99□□□□□ -0.49
SMARCA2-239ENST00000635388 TNFRSF10AO00220 468 aa11.99□□□□□ -0.49
SMARCA2-239ENST00000635388 PRR20EP86478 221 aa11.99□□□□□ -0.49
SMARCA2-239ENST00000635388 PRR20CP86479 221 aa11.99□□□□□ -0.49
SMARCA2-239ENST00000635388 PRR20DP86480 221 aa11.99□□□□□ -0.49
SMARCA2-239ENST00000635388 PRR20BP86481 221 aa11.99□□□□□ -0.49
SMARCA2-239ENST00000635388 PRR20AP86496 221 aa11.99□□□□□ -0.49
SMARCA2-239ENST00000635388 KLF16Q9BXK1 252 aaPredicted RBP11.99□□□□□ -0.49
SMARCA2-239ENST00000635388 EMILIN1Q9Y6C2 1016 aa11.99□□□□□ -0.49
SMARCA2-239ENST00000635388 ADD1P35611 737 aaKnown RBP11.98□□□□□ -0.49
SMARCA2-239ENST00000635388 MYT1Q01538 1121 aa11.98□□□□□ -0.49
SMARCA2-239ENST00000635388 ABCC8Q09428 1581 aa11.97□□□□□ -0.49
SMARCA2-239ENST00000635388 SFI1A8K8P3 1242 aa11.97□□□□□ -0.49
SMARCA2-239ENST00000635388 TMEM229AB2RXF0 380 aa11.97□□□□□ -0.49
SMARCA2-239ENST00000635388 BRD1O95696 1058 aa11.97□□□□□ -0.49
SMARCA2-239ENST00000635388 SCNN1DP51172 638 aa11.97□□□□□ -0.49
SMARCA2-239ENST00000635388 KCTD17Q8N5Z5 321 aa11.97□□□□□ -0.49
SMARCA2-239ENST00000635388 CLP1Q92989 425 aaKnown RBP11.97□□□□□ -0.49
SMARCA2-239ENST00000635388 STAU1O95793 577 aaKnown RBP11.96□□□□□ -0.49
SMARCA2-239ENST00000635388 SMPD1P17405 629 aa11.96□□□□□ -0.49
SMARCA2-239ENST00000635388 SEC13P55735 322 aa11.96□□□□□ -0.49
SMARCA2-239ENST00000635388 PSME1Q06323 249 aa11.96□□□□□ -0.49
SMARCA2-239ENST00000635388 SWI5Q1ZZU3 235 aa11.96□□□□□ -0.49
SMARCA2-239ENST00000635388 PGPEP1Q9NXJ5 209 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms