RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	PRR20E	P86478	221 aa		11.23	□□□□□ -0.61
SMARCA2-238	ENST00000635273	PRR20C	P86479	221 aa		11.23	□□□□□ -0.61
SMARCA2-238	ENST00000635273	PRR20D	P86480	221 aa		11.23	□□□□□ -0.61
SMARCA2-238	ENST00000635273	PRR20B	P86481	221 aa		11.23	□□□□□ -0.61
SMARCA2-238	ENST00000635273	PRR20A	P86496	221 aa		11.23	□□□□□ -0.61
SMARCA2-238	ENST00000635273	OXLD1	Q5BKU9	147 aa		11.23	□□□□□ -0.61
SMARCA2-238	ENST00000635273	RNF20	Q5VTR2	975 aa		11.23	□□□□□ -0.61
SMARCA2-238	ENST00000635273	TRIM67	Q6ZTA4	783 aa		11.23	□□□□□ -0.61
SMARCA2-238	ENST00000635273	LARGE2	Q8N3Y3	721 aa		11.23	□□□□□ -0.61
SMARCA2-238	ENST00000635273	CCER1	Q8TC90	406 aa	Predicted RBP	11.23	□□□□□ -0.61
SMARCA2-238	ENST00000635273	SLC10A4	Q96EP9	437 aa		11.23	□□□□□ -0.61
SMARCA2-238	ENST00000635273	FAM187A	A6NFU0	413 aa		11.22	□□□□□ -0.61
SMARCA2-238	ENST00000635273	DKK1	O94907	266 aa		11.22	□□□□□ -0.61
SMARCA2-238	ENST00000635273	C1QTNF2	Q9BXJ5	285 aa		11.22	□□□□□ -0.61
SMARCA2-238	ENST00000635273	ARID4A	P29374	1257 aa	Predicted RBP	11.21	□□□□□ -0.61
SMARCA2-238	ENST00000635273	SWI5	Q1ZZU3	235 aa		11.21	□□□□□ -0.61
SMARCA2-238	ENST00000635273	KIAA1024	Q9UPX6	916 aa		11.21	□□□□□ -0.61
SMARCA2-238	ENST00000635273	ESPN	B1AK53	854 aa		11.2	□□□□□ -0.62
SMARCA2-238	ENST00000635273	ATP2B4	P23634	1241 aa		11.2	□□□□□ -0.62
SMARCA2-238	ENST00000635273	SLC19A1	P41440	591 aa		11.2	□□□□□ -0.62
SMARCA2-238	ENST00000635273	SH3BP2	P78314	561 aa		11.2	□□□□□ -0.62
SMARCA2-238	ENST00000635273	GTF2I	P78347	998 aa		11.2	□□□□□ -0.62
SMARCA2-238	ENST00000635273	SIX5	Q8N196	739 aa		11.2	□□□□□ -0.62
SMARCA2-238	ENST00000635273	NBPF20	Q3BBV1	942 aa		11.19	□□□□□ -0.62
SMARCA2-238	ENST00000635273	TRMT44	Q8IYL2	757 aa	Known RBP	11.19	□□□□□ -0.62
SMARCA2-238	ENST00000635273	PPEF1	O14829	653 aa	Predicted RBP	11.17	□□□□□ -0.62
SMARCA2-238	ENST00000635273	WIPF1	O43516	503 aa		11.17	□□□□□ -0.62
SMARCA2-238	ENST00000635273	CCDC102B	Q68D86	513 aa		11.17	□□□□□ -0.62
SMARCA2-238	ENST00000635273	SEPT12	Q8IYM1	358 aa		11.17	□□□□□ -0.62
SMARCA2-238	ENST00000635273	CDV3	Q9UKY7	258 aa	Known RBP	11.17	□□□□□ -0.62
SMARCA2-238	ENST00000635273	PCDHB11	Q9Y5F2	797 aa		11.17	□□□□□ -0.62
SMARCA2-238	ENST00000635273	PCDHGA11	Q9Y5H2	935 aa		11.17	□□□□□ -0.62
SMARCA2-238	ENST00000635273	SEC13	P55735	322 aa		11.16	□□□□□ -0.62
SMARCA2-238	ENST00000635273	USP4	Q13107	963 aa		11.16	□□□□□ -0.62
SMARCA2-238	ENST00000635273	ZNF598	Q86UK7	904 aa	Known RBP	11.16	□□□□□ -0.62
SMARCA2-238	ENST00000635273	SIRT1	Q96EB6	747 aa		11.16	□□□□□ -0.62
SMARCA2-238	ENST00000635273	CCDC125	Q86Z20	511 aa		11.15	□□□□□ -0.62
SMARCA2-238	ENST00000635273	TPCN2	Q8NHX9	752 aa		11.15	□□□□□ -0.62
SMARCA2-238	ENST00000635273	RBM19	Q9Y4C8	960 aa	Known RBP	11.15	□□□□□ -0.62
SMARCA2-238	ENST00000635273	SPRYD7	Q5W111	196 aa		11.14	□□□□□ -0.63
SMARCA2-238	ENST00000635273	C1orf216	Q8TAB5	229 aa		11.14	□□□□□ -0.63
SMARCA2-238	ENST00000635273	ZNF428	Q96B54	188 aa		11.14	□□□□□ -0.63
SMARCA2-238	ENST00000635273	SFI1	A8K8P3	1242 aa		11.13	□□□□□ -0.63
SMARCA2-238	ENST00000635273	ZBTB24	O43167	697 aa	Predicted RBP	11.13	□□□□□ -0.63
SMARCA2-238	ENST00000635273	PSME1	Q06323	249 aa		11.13	□□□□□ -0.63
SMARCA2-238	ENST00000635273	PRMT3	O60678	531 aa		11.12	□□□□□ -0.63
SMARCA2-238	ENST00000635273	SCNN1A	P37088	669 aa		11.12	□□□□□ -0.63
SMARCA2-238	ENST00000635273	SERPINB4	P48594	390 aa		11.12	□□□□□ -0.63
SMARCA2-238	ENST00000635273	RBM25	P49756	843 aa	Known RBP	11.12	□□□□□ -0.63
SMARCA2-238	ENST00000635273	KCTD15	Q96SI1	283 aa	Predicted RBP	11.12	□□□□□ -0.63
SMARCA2-238	ENST00000635273	AAAS	Q9NRG9	546 aa		11.12	□□□□□ -0.63
SMARCA2-238	ENST00000635273	RNF223	E7ERA6	249 aa		11.11	□□□□□ -0.63
SMARCA2-238	ENST00000635273	TRIM32	Q13049	653 aa		11.11	□□□□□ -0.63
SMARCA2-238	ENST00000635273	OCLN	Q16625	522 aa		11.11	□□□□□ -0.63
SMARCA2-238	ENST00000635273	PRIMPOL	Q96LW4	560 aa		11.11	□□□□□ -0.63
SMARCA2-238	ENST00000635273	SOWAHD	A6NJG2	315 aa		11.1	□□□□□ -0.63
SMARCA2-238	ENST00000635273	ST8SIA5	O15466	376 aa		11.1	□□□□□ -0.63
SMARCA2-238	ENST00000635273	VARS	P26640	1264 aa	Known RBP	11.1	□□□□□ -0.63
SMARCA2-238	ENST00000635273	RAB15	P59190	212 aa		11.1	□□□□□ -0.63
SMARCA2-238	ENST00000635273	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.1	□□□□□ -0.63
SMARCA2-238	ENST00000635273	AMOTL2	Q9Y2J4	779 aa		11.1	□□□□□ -0.63
SMARCA2-238	ENST00000635273	FAM181B	A6NEQ2	426 aa		11.09	□□□□□ -0.63
SMARCA2-238	ENST00000635273	SKOR1	P84550	965 aa		11.09	□□□□□ -0.63
SMARCA2-238	ENST00000635273	PLA2G2C	Q5R387	149 aa		11.09	□□□□□ -0.63
SMARCA2-238	ENST00000635273	TAS1R3	Q7RTX0	852 aa		11.09	□□□□□ -0.63
SMARCA2-238	ENST00000635273	MYC	P01106	439 aa	Predicted RBP	11.08	□□□□□ -0.64
SMARCA2-238	ENST00000635273	WNT7B	P56706	349 aa		11.08	□□□□□ -0.64
SMARCA2-238	ENST00000635273	ZNF697	Q5TEC3	545 aa		11.08	□□□□□ -0.64
SMARCA2-238	ENST00000635273	ANKLE1	Q8NAG6	615 aa		11.08	□□□□□ -0.64
SMARCA2-238	ENST00000635273	MAP4K5	Q9Y4K4	846 aa		11.08	□□□□□ -0.64
SMARCA2-238	ENST00000635273	INTS6L	Q5JSJ4	861 aa	Known RBP	11.07	□□□□□ -0.64
SMARCA2-238	ENST00000635273	VASH1	Q7L8A9	365 aa	Predicted RBP	11.07	□□□□□ -0.64
SMARCA2-238	ENST00000635273	HINFP	Q9BQA5	517 aa		11.07	□□□□□ -0.64
SMARCA2-238	ENST00000635273	ERVH48-1	M5A8F1	160 aa		11.06	□□□□□ -0.64
SMARCA2-238	ENST00000635273	LGR5	O75473	907 aa		11.06	□□□□□ -0.64
SMARCA2-238	ENST00000635273	SCTR	P47872	440 aa		11.06	□□□□□ -0.64
SMARCA2-238	ENST00000635273		M0R2N6	131 aa		11.05	□□□□□ -0.64
SMARCA2-238	ENST00000635273	TNFRSF10A	O00220	468 aa		11.04	□□□□□ -0.64
SMARCA2-238	ENST00000635273	NFX1	Q12986	1120 aa	Known RBP	11.04	□□□□□ -0.64
SMARCA2-238	ENST00000635273	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
SMARCA2-238	ENST00000635273	TSEN2	Q8NCE0	465 aa	Known RBP	11.04	□□□□□ -0.64
SMARCA2-238	ENST00000635273	C11orf95	C9JLR9	678 aa	Predicted RBP	11.03	□□□□□ -0.64
SMARCA2-238	ENST00000635273	GDF9	O60383	454 aa		11.03	□□□□□ -0.64
SMARCA2-238	ENST00000635273	WEE1	P30291	646 aa		11.03	□□□□□ -0.64
SMARCA2-238	ENST00000635273	RPIA	P49247	311 aa		11.03	□□□□□ -0.64
SMARCA2-238	ENST00000635273	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.03	□□□□□ -0.64
SMARCA2-238	ENST00000635273	ERVK-9	P63128	1117 aa		11.02	□□□□□ -0.65
SMARCA2-238	ENST00000635273	ARID5B	Q14865	1188 aa		11.02	□□□□□ -0.65
SMARCA2-238	ENST00000635273	CRIPAK	Q8N1N5	446 aa		11.02	□□□□□ -0.65
SMARCA2-238	ENST00000635273	EHBP1	Q8NDI1	1231 aa		11.02	□□□□□ -0.65
SMARCA2-238	ENST00000635273	ZNF358	Q9NW07	568 aa		11.02	□□□□□ -0.65
SMARCA2-238	ENST00000635273	CC2D2B	Q6DHV5	1058 aa		11.01	□□□□□ -0.65
SMARCA2-238	ENST00000635273	CDK15	Q96Q40	435 aa		11.01	□□□□□ -0.65
SMARCA2-238	ENST00000635273	ESF1	Q9H501	851 aa	Known RBP	11.01	□□□□□ -0.65
SMARCA2-238	ENST00000635273	BIN2	Q9UBW5	565 aa	Predicted RBP	11.01	□□□□□ -0.65
SMARCA2-238	ENST00000635273	EGFL7	Q9UHF1	273 aa		11.01	□□□□□ -0.65
SMARCA2-238	ENST00000635273	TMEM229A	B2RXF0	380 aa		11	□□□□□ -0.65
SMARCA2-238	ENST00000635273		E9PSI1	815 aa		11	□□□□□ -0.65
SMARCA2-238	ENST00000635273	ABL1	P00519	1130 aa		11	□□□□□ -0.65
SMARCA2-238	ENST00000635273	RC3H1	Q5TC82	1133 aa	Known RBP	11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms