RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 BMP1P13497 986 aa12.65□□□□□ -0.38
LINC01108-202ENST00000635227 NCOA4Q13772 614 aa12.65□□□□□ -0.38
LINC01108-202ENST00000635227 MEIOBQ8N635 442 aa12.65□□□□□ -0.38
LINC01108-202ENST00000635227 MAFBQ9Y5Q3 323 aaPredicted RBP12.65□□□□□ -0.38
LINC01108-202ENST00000635227 USP17L3A6NCW0 530 aa12.64□□□□□ -0.39
LINC01108-202ENST00000635227 USP17L4A6NCW7 530 aa12.64□□□□□ -0.39
LINC01108-202ENST00000635227 USP17L2Q6R6M4 530 aa12.64□□□□□ -0.39
LINC01108-202ENST00000635227 USP17L1Q7RTZ2 530 aa12.64□□□□□ -0.39
LINC01108-202ENST00000635227 CCDC82Q8N4S0 544 aa12.64□□□□□ -0.39
LINC01108-202ENST00000635227 OSBPL3Q9H4L5 887 aa12.64□□□□□ -0.39
LINC01108-202ENST00000635227 USP4Q13107 963 aa12.63□□□□□ -0.39
LINC01108-202ENST00000635227 CFAP70Q5T0N1 1121 aa12.63□□□□□ -0.39
LINC01108-202ENST00000635227 AGBL1Q96MI9 1066 aa12.63□□□□□ -0.39
LINC01108-202ENST00000635227 ZCCHC6Q5VYS8 1495 aaKnown RBP12.63□□□□□ -0.39
LINC01108-202ENST00000635227 MYCP01106 439 aaPredicted RBP12.62□□□□□ -0.39
LINC01108-202ENST00000635227 EML3Q32P44 896 aa12.62□□□□□ -0.39
LINC01108-202ENST00000635227 TRIM46Q7Z4K8 759 aa12.62□□□□□ -0.39
LINC01108-202ENST00000635227 PLEKHM2Q8IWE5 1019 aa12.62□□□□□ -0.39
LINC01108-202ENST00000635227 KDF1Q8NAX2 398 aaPredicted RBP12.62□□□□□ -0.39
LINC01108-202ENST00000635227 CCDC97Q96F63 343 aaPredicted RBP12.62□□□□□ -0.39
LINC01108-202ENST00000635227 EIF4G1Q04637 1599 aaKnown RBP12.61□□□□□ -0.39
LINC01108-202ENST00000635227 ADH1AP07327 375 aa12.61□□□□□ -0.39
LINC01108-202ENST00000635227 LMOD1P29536 600 aaPredicted RBP12.61□□□□□ -0.39
LINC01108-202ENST00000635227 MRPL14Q6P1L8 145 aaKnown RBP12.6□□□□□ -0.39
LINC01108-202ENST00000635227 TRIM52Q96A61 297 aa12.6□□□□□ -0.39
LINC01108-202ENST00000635227 ESF1Q9H501 851 aaKnown RBP12.6□□□□□ -0.39
LINC01108-202ENST00000635227 ATP13A2Q9NQ11 1180 aa12.6□□□□□ -0.39
LINC01108-202ENST00000635227 SERPINA10Q9UK55 444 aa12.6□□□□□ -0.39
LINC01108-202ENST00000635227 LZTS3O60299 673 aaPredicted RBP12.59□□□□□ -0.39
LINC01108-202ENST00000635227 RELBQ01201 579 aa12.59□□□□□ -0.39
LINC01108-202ENST00000635227 LINC00528Q8N1L1 170 aa12.59□□□□□ -0.39
LINC01108-202ENST00000635227 RFX1P22670 979 aa12.58□□□□□ -0.4
LINC01108-202ENST00000635227 SIRT1Q96EB6 747 aa12.58□□□□□ -0.4
LINC01108-202ENST00000635227 NOD1Q9Y239 953 aa12.58□□□□□ -0.4
LINC01108-202ENST00000635227 ATP5J2-PTCD1G3V325 749 aa12.57□□□□□ -0.4
LINC01108-202ENST00000635227 C6orf118Q5T5N4 469 aa12.57□□□□□ -0.4
LINC01108-202ENST00000635227 PURBQ96QR8 312 aaKnown RBP12.57□□□□□ -0.4
LINC01108-202ENST00000635227 TSEN34Q9BSV6 310 aaKnown RBP12.57□□□□□ -0.4
LINC01108-202ENST00000635227 ZNF395Q9H8N7 513 aaPredicted RBP12.57□□□□□ -0.4
LINC01108-202ENST00000635227 STAU1O95793 577 aaKnown RBP12.56□□□□□ -0.4
LINC01108-202ENST00000635227 CYP2U1Q7Z449 544 aa12.56□□□□□ -0.4
LINC01108-202ENST00000635227 MKRN1Q9UHC7 482 aaKnown RBP12.56□□□□□ -0.4
LINC01108-202ENST00000635227 PTGIRP43119 386 aa12.55□□□□□ -0.4
LINC01108-202ENST00000635227 ZFP42Q96MM3 310 aa12.55□□□□□ -0.4
LINC01108-202ENST00000635227 PCDHGA11Q9Y5H2 935 aa12.55□□□□□ -0.4
LINC01108-202ENST00000635227 UPP2O95045 317 aa12.54□□□□□ -0.4
LINC01108-202ENST00000635227 BMP2P12643 396 aa12.54□□□□□ -0.4
LINC01108-202ENST00000635227 GTF2IP78347 998 aa12.54□□□□□ -0.4
LINC01108-202ENST00000635227 KANK4Q5T7N3 995 aaPredicted RBP12.54□□□□□ -0.4
LINC01108-202ENST00000635227 ARID3AQ99856 593 aa12.53□□□□□ -0.4
LINC01108-202ENST00000635227 ARHGEF10LQ9HCE6 1279 aa12.53□□□□□ -0.4
LINC01108-202ENST00000635227 RAB6BQ9NRW1 208 aa12.53□□□□□ -0.4
LINC01108-202ENST00000635227 SPINT1O43278 529 aa12.52□□□□□ -0.41
LINC01108-202ENST00000635227 CLDN10P78369 228 aa12.52□□□□□ -0.41
LINC01108-202ENST00000635227 SCARF1Q14162 830 aa12.52□□□□□ -0.41
LINC01108-202ENST00000635227 GMPR2Q9P2T1 348 aaKnown RBP12.52□□□□□ -0.41
LINC01108-202ENST00000635227 A0A1W2PRU2 124 aa12.51□□□□□ -0.41
LINC01108-202ENST00000635227 GNRH1P01148 92 aa12.51□□□□□ -0.41
LINC01108-202ENST00000635227 CDCA8Q53HL2 280 aa12.51□□□□□ -0.41
LINC01108-202ENST00000635227 INSM2Q96T92 566 aaPredicted RBP12.51□□□□□ -0.41
LINC01108-202ENST00000635227 KIAA1024Q9UPX6 916 aa12.51□□□□□ -0.41
LINC01108-202ENST00000635227 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.5□□□□□ -0.41
LINC01108-202ENST00000635227 TRIM50Q86XT4 487 aa12.5□□□□□ -0.41
LINC01108-202ENST00000635227 OGFOD1Q8N543 542 aa12.5□□□□□ -0.41
LINC01108-202ENST00000635227 VRTNQ9H8Y1 702 aa12.5□□□□□ -0.41
LINC01108-202ENST00000635227 ETNK1Q9HBU6 452 aa12.5□□□□□ -0.41
LINC01108-202ENST00000635227 ERCC6Q03468 1493 aa12.49□□□□□ -0.41
LINC01108-202ENST00000635227 POTECB2RU33 542 aa12.49□□□□□ -0.41
LINC01108-202ENST00000635227 ZBTB7BO15156 539 aaPredicted RBP12.49□□□□□ -0.41
LINC01108-202ENST00000635227 SCNN1DP51172 638 aa12.49□□□□□ -0.41
LINC01108-202ENST00000635227 SRPK2P78362 688 aaKnown RBP12.49□□□□□ -0.41
LINC01108-202ENST00000635227 MEN1O00255 615 aa12.48□□□□□ -0.41
LINC01108-202ENST00000635227 IL2RAP01589 272 aa12.48□□□□□ -0.41
LINC01108-202ENST00000635227 RASA1P20936 1047 aa12.48□□□□□ -0.41
LINC01108-202ENST00000635227 CTSOP43234 321 aaPredicted RBP12.48□□□□□ -0.41
LINC01108-202ENST00000635227 PSME1Q06323 249 aa12.48□□□□□ -0.41
LINC01108-202ENST00000635227 DNAAF2Q9NVR5 837 aaKnown RBP12.48□□□□□ -0.41
LINC01108-202ENST00000635227 SHROOM4Q9ULL8 1493 aa12.47□□□□□ -0.41
LINC01108-202ENST00000635227 ATP1A2P50993 1020 aa12.47□□□□□ -0.41
LINC01108-202ENST00000635227 CLN3Q13286 438 aa12.47□□□□□ -0.41
LINC01108-202ENST00000635227 CRTC2Q53ET0 693 aaPredicted RBP12.47□□□□□ -0.41
LINC01108-202ENST00000635227 ZNF594Q96JF6 807 aaPredicted RBP12.47□□□□□ -0.41
LINC01108-202ENST00000635227 TMEM229AB2RXF0 380 aa12.46□□□□□ -0.41
LINC01108-202ENST00000635227 GDF10P55107 478 aa12.46□□□□□ -0.41
LINC01108-202ENST00000635227 POLMQ9NP87 494 aaPredicted RBP12.46□□□□□ -0.41
LINC01108-202ENST00000635227 SOS2Q07890 1332 aaPredicted RBP12.45□□□□□ -0.42
LINC01108-202ENST00000635227 TPCN2Q8NHX9 752 aa12.45□□□□□ -0.42
LINC01108-202ENST00000635227 CNKSR1Q969H4 720 aa12.45□□□□□ -0.42
LINC01108-202ENST00000635227 TRIM47Q96LD4 638 aa12.45□□□□□ -0.42
LINC01108-202ENST00000635227 SENP2Q9HC62 589 aa12.45□□□□□ -0.42
LINC01108-202ENST00000635227 MYO15BQ96JP2 1530 aa12.45□□□□□ -0.42
LINC01108-202ENST00000635227 DCAF1Q9Y4B6 1507 aa12.44□□□□□ -0.42
LINC01108-202ENST00000635227 INHAP05111 366 aa12.44□□□□□ -0.42
LINC01108-202ENST00000635227 PTK7Q13308 1070 aa12.44□□□□□ -0.42
LINC01108-202ENST00000635227 FOXD4L5Q5VV16 416 aaPredicted RBP12.44□□□□□ -0.42
LINC01108-202ENST00000635227 CCDC102BQ68D86 513 aa12.44□□□□□ -0.42
LINC01108-202ENST00000635227 LARP1Q6PKG0 1096 aaKnown RBP12.44□□□□□ -0.42
LINC01108-202ENST00000635227 LARGE2Q8N3Y3 721 aa12.44□□□□□ -0.42
LINC01108-202ENST00000635227 XAGE2Q96GT9 111 aa12.44□□□□□ -0.42
LINC01108-202ENST00000635227 ESYT1Q9BSJ8 1104 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 273.4 ms