RNA–Protein interactions for RNA: ENST00000634338.1

SMARCA2-220, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-220ENST00000634338 ZPR1O75312 459 aa10.66□□□□□ -0.7
SMARCA2-220ENST00000634338 PSME1Q06323 249 aa10.66□□□□□ -0.7
SMARCA2-220ENST00000634338 ZNF211Q13398 564 aaPredicted RBP10.66□□□□□ -0.7
SMARCA2-220ENST00000634338 NBPF20Q3BBV1 942 aa10.66□□□□□ -0.7
SMARCA2-220ENST00000634338 SHROOM4Q9ULL8 1493 aa10.66□□□□□ -0.7
SMARCA2-220ENST00000634338 ESPNB1AK53 854 aa10.65□□□□□ -0.7
SMARCA2-220ENST00000634338 USP4Q13107 963 aa10.65□□□□□ -0.7
SMARCA2-220ENST00000634338 GLYCTKQ8IVS8 523 aa10.65□□□□□ -0.7
SMARCA2-220ENST00000634338 M0R2N6 131 aa10.64□□□□□ -0.71
SMARCA2-220ENST00000634338 C21orf2O43822 256 aa10.64□□□□□ -0.71
SMARCA2-220ENST00000634338 SEPT12Q8IYM1 358 aa10.64□□□□□ -0.71
SMARCA2-220ENST00000634338 AGERQ15109 404 aa10.63□□□□□ -0.71
SMARCA2-220ENST00000634338 ZNF326Q5BKZ1 582 aaKnown RBP10.63□□□□□ -0.71
SMARCA2-220ENST00000634338 NYAP1Q6ZVC0 841 aa10.63□□□□□ -0.71
SMARCA2-220ENST00000634338 ZNF511Q8NB15 262 aa10.63□□□□□ -0.71
SMARCA2-220ENST00000634338 BAP1Q92560 729 aa10.63□□□□□ -0.71
SMARCA2-220ENST00000634338 C1QTNF2Q9BXJ5 285 aa10.63□□□□□ -0.71
SMARCA2-220ENST00000634338 CDV3Q9UKY7 258 aaKnown RBP10.63□□□□□ -0.71
SMARCA2-220ENST00000634338 PCDHB11Q9Y5F2 797 aa10.63□□□□□ -0.71
SMARCA2-220ENST00000634338 C4orf48Q5BLP8 95 aa10.62□□□□□ -0.71
SMARCA2-220ENST00000634338 ANKRD13DQ6ZTN6 518 aa10.62□□□□□ -0.71
SMARCA2-220ENST00000634338 FOXJ1Q92949 421 aa10.62□□□□□ -0.71
SMARCA2-220ENST00000634338 HINFPQ9BQA5 517 aa10.62□□□□□ -0.71
SMARCA2-220ENST00000634338 SLC6A16Q9GZN6 736 aa10.62□□□□□ -0.71
SMARCA2-220ENST00000634338 VAMP1P23763 118 aa10.61□□□□□ -0.71
SMARCA2-220ENST00000634338 WEE1P30291 646 aa10.61□□□□□ -0.71
SMARCA2-220ENST00000634338 TRMT44Q8IYL2 757 aaKnown RBP10.61□□□□□ -0.71
SMARCA2-220ENST00000634338 GTF3C2Q8WUA4 911 aaPredicted RBP10.61□□□□□ -0.71
SMARCA2-220ENST00000634338 ANO2Q9NQ90 1003 aa10.61□□□□□ -0.71
SMARCA2-220ENST00000634338 DCTN4Q9UJW0 460 aa10.61□□□□□ -0.71
SMARCA2-220ENST00000634338 PTCD1O75127 700 aaKnown RBP10.6□□□□□ -0.71
SMARCA2-220ENST00000634338 SF3B2Q13435 895 aaKnown RBP10.6□□□□□ -0.71
SMARCA2-220ENST00000634338 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
SMARCA2-220ENST00000634338 THSD4Q6ZMP0 1018 aa10.6□□□□□ -0.71
SMARCA2-220ENST00000634338 ASB16Q96NS5 453 aa10.6□□□□□ -0.71
SMARCA2-220ENST00000634338 TCF3P15923 654 aa10.59□□□□□ -0.71
SMARCA2-220ENST00000634338 MAPK1P28482 360 aa10.59□□□□□ -0.71
SMARCA2-220ENST00000634338 FBXO33Q7Z6M2 555 aa10.59□□□□□ -0.71
SMARCA2-220ENST00000634338 MTRQ99707 1265 aa10.59□□□□□ -0.71
SMARCA2-220ENST00000634338 USP35Q9P2H5 1018 aa10.59□□□□□ -0.71
SMARCA2-220ENST00000634338 SEPT3Q9UH03 358 aa10.59□□□□□ -0.71
SMARCA2-220ENST00000634338 DNMT3AQ9Y6K1 912 aaPredicted RBP10.59□□□□□ -0.71
SMARCA2-220ENST00000634338 FKBP4Q02790 459 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMARCA2-220ENST00000634338 FKBP5Q13451 457 aaPredicted RBP10.58□□□□□ -0.72
SMARCA2-220ENST00000634338 COL19A1Q14993 1142 aa10.58□□□□□ -0.72
SMARCA2-220ENST00000634338 ECM1Q16610 540 aa10.58□□□□□ -0.72
SMARCA2-220ENST00000634338 COL26A1Q96A83 441 aa10.58□□□□□ -0.72
SMARCA2-220ENST00000634338 ZSCAN29Q8IWY8 852 aaPredicted RBP10.57□□□□□ -0.72
SMARCA2-220ENST00000634338 TSEN2Q8NCE0 465 aaKnown RBP10.57□□□□□ -0.72
SMARCA2-220ENST00000634338 MKNK1Q9BUB5 465 aa10.57□□□□□ -0.72
SMARCA2-220ENST00000634338 LGR5O75473 907 aa10.56□□□□□ -0.72
SMARCA2-220ENST00000634338 MYCP01106 439 aaPredicted RBP10.56□□□□□ -0.72
SMARCA2-220ENST00000634338 ARHGAP4P98171 946 aa10.56□□□□□ -0.72
SMARCA2-220ENST00000634338 IL21Q9HBE4 155 aa10.55□□□□□ -0.72
SMARCA2-220ENST00000634338 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCA2-220ENST00000634338 FCF1Q9Y324 198 aaKnown RBP10.54□□□□□ -0.72
SMARCA2-220ENST00000634338 FOXO3O43524 673 aa10.53□□□□□ -0.72
SMARCA2-220ENST00000634338 IGFBP4P22692 258 aa10.53□□□□□ -0.72
SMARCA2-220ENST00000634338 RGL4Q8IZJ4 473 aa10.53□□□□□ -0.72
SMARCA2-220ENST00000634338 HELQQ8TDG4 1101 aa10.53□□□□□ -0.72
SMARCA2-220ENST00000634338 ZNF358Q9NW07 568 aa10.53□□□□□ -0.72
SMARCA2-220ENST00000634338 SH3BP2P78314 561 aa10.52□□□□□ -0.73
SMARCA2-220ENST00000634338 MTMR3Q13615 1198 aa10.52□□□□□ -0.73
SMARCA2-220ENST00000634338 TJAP1Q5JTD0 557 aa10.52□□□□□ -0.73
SMARCA2-220ENST00000634338 CAPN12Q6ZSI9 719 aa10.52□□□□□ -0.73
SMARCA2-220ENST00000634338 PURBQ96QR8 312 aaKnown RBP10.52□□□□□ -0.73
SMARCA2-220ENST00000634338 KCTD15Q96SI1 283 aaPredicted RBP10.52□□□□□ -0.73
SMARCA2-220ENST00000634338 S1PR4O95977 384 aa10.51□□□□□ -0.73
SMARCA2-220ENST00000634338 NPR3P17342 541 aa10.51□□□□□ -0.73
SMARCA2-220ENST00000634338 ZNF516Q92618 1163 aa10.51□□□□□ -0.73
SMARCA2-220ENST00000634338 BCL11AQ9H165 835 aa10.51□□□□□ -0.73
SMARCA2-220ENST00000634338 MAP4K5Q9Y4K4 846 aa10.5□□□□□ -0.73
SMARCA2-220ENST00000634338 TMEM229AB2RXF0 380 aa10.49□□□□□ -0.73
SMARCA2-220ENST00000634338 WASLO00401 505 aaPredicted RBP10.49□□□□□ -0.73
SMARCA2-220ENST00000634338 FAM13AO94988 1023 aa10.49□□□□□ -0.73
SMARCA2-220ENST00000634338 SCTRP47872 440 aa10.49□□□□□ -0.73
SMARCA2-220ENST00000634338 TAGLNQ01995 201 aaKnown RBP10.49□□□□□ -0.73
SMARCA2-220ENST00000634338 C8orf37Q96NL8 207 aa10.49□□□□□ -0.73
SMARCA2-220ENST00000634338 RECKO95980 971 aa10.48□□□□□ -0.73
SMARCA2-220ENST00000634338 RAB15P59190 212 aa10.48□□□□□ -0.73
SMARCA2-220ENST00000634338 ERVK-9P63128 1117 aa10.48□□□□□ -0.73
SMARCA2-220ENST00000634338 EAPPQ56P03 285 aaPredicted RBP10.48□□□□□ -0.73
SMARCA2-220ENST00000634338 INTS6LQ5JSJ4 861 aaKnown RBP10.48□□□□□ -0.73
SMARCA2-220ENST00000634338 KCTD12Q96CX2 325 aaKnown RBP10.48□□□□□ -0.73
SMARCA2-220ENST00000634338 RBCK1Q9BYM8 510 aa10.48□□□□□ -0.73
SMARCA2-220ENST00000634338 ERVH48-1M5A8F1 160 aa10.47□□□□□ -0.73
SMARCA2-220ENST00000634338 BACH1O14867 736 aa10.47□□□□□ -0.73
SMARCA2-220ENST00000634338 GAS2L2Q8NHY3 880 aa10.47□□□□□ -0.73
SMARCA2-220ENST00000634338 SCNN1DP51172 638 aa10.46□□□□□ -0.73
SMARCA2-220ENST00000634338 NAA30Q147X3 362 aaPredicted RBP10.46□□□□□ -0.73
SMARCA2-220ENST00000634338 CC2D2BQ6DHV5 1058 aa10.46□□□□□ -0.73
SMARCA2-220ENST00000634338 SCG3Q8WXD2 468 aaKnown RBP10.46□□□□□ -0.73
SMARCA2-220ENST00000634338 TRIM52Q96A61 297 aa10.46□□□□□ -0.73
SMARCA2-220ENST00000634338 ESF1Q9H501 851 aaKnown RBP10.46□□□□□ -0.73
SMARCA2-220ENST00000634338 VARSP26640 1264 aaKnown RBP10.45□□□□□ -0.74
SMARCA2-220ENST00000634338 GDF10P55107 478 aa10.45□□□□□ -0.74
SMARCA2-220ENST00000634338 VASH1Q7L8A9 365 aaPredicted RBP10.45□□□□□ -0.74
SMARCA2-220ENST00000634338 EPHA4P54764 986 aa10.44□□□□□ -0.74
SMARCA2-220ENST00000634338 TMC7Q7Z402 723 aa10.44□□□□□ -0.74
SMARCA2-220ENST00000634338 OSBPL3Q9H4L5 887 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms