RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 ZCRB1Q8TBF4 217 aaKnown RBP26.07■■□□□ 1.76
CROCCP4-202ENST00000633627 SOCS7O14512 581 aa26.05■■□□□ 1.76
CROCCP4-202ENST00000633627 PLEKHG2Q9H7P9 1386 aa26.05■■□□□ 1.76
CROCCP4-202ENST00000633627 SHANK3Q9BYB0 1731 aa26.04■■□□□ 1.76
CROCCP4-202ENST00000633627 FAM196AQ6ZSG2 479 aa26.03■■□□□ 1.76
CROCCP4-202ENST00000633627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.03■■□□□ 1.76
CROCCP4-202ENST00000633627 PKD1L3Q7Z443 1732 aa26.02■■□□□ 1.76
CROCCP4-202ENST00000633627 U2SURPO15042 1029 aaKnown RBP26.02■■□□□ 1.76
CROCCP4-202ENST00000633627 NUDCQ9Y266 331 aa26.02■■□□□ 1.76
CROCCP4-202ENST00000633627 BCL9O00512 1426 aa26.02■■□□□ 1.76
CROCCP4-202ENST00000633627 HMOX1P09601 288 aa26.01■■□□□ 1.75
CROCCP4-202ENST00000633627 UPF1Q92900 1129 aaKnown RBP eCLIP26.01■■□□□ 1.75
CROCCP4-202ENST00000633627 ANP32CO43423 234 aa26■■□□□ 1.75
CROCCP4-202ENST00000633627 DDX54Q8TDD1 881 aaKnown RBP25.99■■□□□ 1.75
CROCCP4-202ENST00000633627 SPG7Q9UQ90 795 aa25.98■■□□□ 1.75
CROCCP4-202ENST00000633627 CYP27B1O15528 508 aa25.97■■□□□ 1.75
CROCCP4-202ENST00000633627 PCDH11XQ9BZA7 1347 aa25.96■■□□□ 1.75
CROCCP4-202ENST00000633627 PCDH11YQ9BZA8 1340 aa25.96■■□□□ 1.75
CROCCP4-202ENST00000633627 SBF2Q86WG5 1849 aa25.95■■□□□ 1.75
CROCCP4-202ENST00000633627 U2AF1L5P0DN76 240 aaPredicted RBP25.95■■□□□ 1.74
CROCCP4-202ENST00000633627 U2AF1Q01081 240 aaKnown RBP eCLIP25.95■■□□□ 1.74
CROCCP4-202ENST00000633627 PLEKHO1Q53GL0 409 aaPredicted RBP25.95■■□□□ 1.74
CROCCP4-202ENST00000633627 AMOTQ4VCS5 1084 aa25.94■■□□□ 1.74
CROCCP4-202ENST00000633627 RSPH6AQ9H0K4 717 aa25.94■■□□□ 1.74
CROCCP4-202ENST00000633627 CCDC125Q86Z20 511 aa25.93■■□□□ 1.74
CROCCP4-202ENST00000633627 FCHSD2O94868 740 aa25.92■■□□□ 1.74
CROCCP4-202ENST00000633627 TRIM37O94972 964 aa25.91■■□□□ 1.74
CROCCP4-202ENST00000633627 NKX1-1Q15270 411 aaPredicted RBP25.91■■□□□ 1.74
CROCCP4-202ENST00000633627 PHKG2P15735 406 aa25.9■■□□□ 1.74
CROCCP4-202ENST00000633627 IFNL2Q8IZJ0 200 aa25.9■■□□□ 1.74
CROCCP4-202ENST00000633627 KAT6BQ8WYB5 2073 aa25.9■■□□□ 1.74
CROCCP4-202ENST00000633627 PRKAR2BP31323 418 aa25.89■■□□□ 1.74
CROCCP4-202ENST00000633627 CCDC184Q52MB2 194 aa25.89■■□□□ 1.74
CROCCP4-202ENST00000633627 ZNF530Q6P9A1 599 aaPredicted RBP25.88■■□□□ 1.73
CROCCP4-202ENST00000633627 PTF1AQ7RTS3 328 aa25.88■■□□□ 1.73
CROCCP4-202ENST00000633627 TNS1Q9HBL0 1735 aaKnown RBP25.88■■□□□ 1.73
CROCCP4-202ENST00000633627 KCNQ2O43526 872 aa25.87■■□□□ 1.73
CROCCP4-202ENST00000633627 MTHFSDQ2M296 383 aaKnown RBP25.87■■□□□ 1.73
CROCCP4-202ENST00000633627 BCL11BQ9C0K0 894 aaPredicted RBP25.87■■□□□ 1.73
CROCCP4-202ENST00000633627 ACSBG1Q96GR2 724 aa25.86■■□□□ 1.73
CROCCP4-202ENST00000633627 PHACTR3Q96KR7 559 aa25.86■■□□□ 1.73
CROCCP4-202ENST00000633627 NHSQ6T4R5 1651 aa25.86■■□□□ 1.73
CROCCP4-202ENST00000633627 DOT1LQ8TEK3 1739 aa25.84■■□□□ 1.73
CROCCP4-202ENST00000633627 PLEKHF1Q96S99 279 aa25.83■■□□□ 1.73
CROCCP4-202ENST00000633627 PRIM1P49642 420 aaKnown RBP25.82■■□□□ 1.72
CROCCP4-202ENST00000633627 SF3B2Q13435 895 aaKnown RBP25.82■■□□□ 1.72
CROCCP4-202ENST00000633627 AKAP4Q5JQC9 854 aa25.82■■□□□ 1.72
CROCCP4-202ENST00000633627 C1orf141Q5JVX7 400 aa25.82■■□□□ 1.72
CROCCP4-202ENST00000633627 TOGARAM1Q9Y4F4 1720 aa25.82■■□□□ 1.72
CROCCP4-202ENST00000633627 HSP90AB1P08238 724 aaKnown RBP25.81■■□□□ 1.72
CROCCP4-202ENST00000633627 WDR43Q15061 677 aaKnown RBP eCLIP25.8■■□□□ 1.72
CROCCP4-202ENST00000633627 DIEXFQ68CQ4 756 aaKnown RBP25.8■■□□□ 1.72
CROCCP4-202ENST00000633627 GAS2L2Q8NHY3 880 aa25.8■■□□□ 1.72
CROCCP4-202ENST00000633627 DCAF5Q96JK2 942 aa25.8■■□□□ 1.72
CROCCP4-202ENST00000633627 ADAMTS8Q9UP79 889 aa25.8■■□□□ 1.72
CROCCP4-202ENST00000633627 KDM6AO15550 1401 aaPredicted RBP25.8■■□□□ 1.72
CROCCP4-202ENST00000633627 APBA3O96018 575 aa25.79■■□□□ 1.72
CROCCP4-202ENST00000633627 DEFB132Q7Z7B7 95 aa25.79■■□□□ 1.72
CROCCP4-202ENST00000633627 PNNQ9H307 717 aaKnown RBP25.79■■□□□ 1.72
CROCCP4-202ENST00000633627 MRS2Q9HD23 443 aa25.79■■□□□ 1.72
CROCCP4-202ENST00000633627 BAG6P46379 1132 aa25.78■■□□□ 1.72
CROCCP4-202ENST00000633627 BTAF1O14981 1849 aa25.77■■□□□ 1.72
CROCCP4-202ENST00000633627 ITGB4P16144 1822 aa25.77■■□□□ 1.72
CROCCP4-202ENST00000633627 MPRIPQ6WCQ1 1025 aa25.77■■□□□ 1.72
CROCCP4-202ENST00000633627 PNISRQ8TF01 805 aaKnown RBP25.77■■□□□ 1.72
CROCCP4-202ENST00000633627 SYTL4Q96C24 671 aaPredicted RBP25.76■■□□□ 1.71
CROCCP4-202ENST00000633627 ADAMTS7Q9UKP4 1686 aa25.75■■□□□ 1.71
CROCCP4-202ENST00000633627 ERVV-2B6SEH9 535 aa25.75■■□□□ 1.71
CROCCP4-202ENST00000633627 PLSCR1O15162 318 aa25.75■■□□□ 1.71
CROCCP4-202ENST00000633627 EN1Q05925 392 aaPredicted RBP25.75■■□□□ 1.71
CROCCP4-202ENST00000633627 SCN11AQ9UI33 1791 aa25.74■■□□□ 1.71
CROCCP4-202ENST00000633627 MAP3K5Q99683 1374 aa25.74■■□□□ 1.71
CROCCP4-202ENST00000633627 CAMKK2Q96RR4 588 aa25.74■■□□□ 1.71
CROCCP4-202ENST00000633627 GNAT3A8MTJ3 354 aa25.73■■□□□ 1.71
CROCCP4-202ENST00000633627 NEFMP07197 916 aa25.73■■□□□ 1.71
CROCCP4-202ENST00000633627 PIGBQ92521 554 aa25.73■■□□□ 1.71
CROCCP4-202ENST00000633627 LGR6Q9HBX8 967 aa25.73■■□□□ 1.71
CROCCP4-202ENST00000633627 RNMTO43148 476 aaKnown RBP25.72■■□□□ 1.71
CROCCP4-202ENST00000633627 MAPK8IP3Q9UPT6 1336 aa25.71■■□□□ 1.71
CROCCP4-202ENST00000633627 IL17REQ8NFR9 667 aa25.71■■□□□ 1.71
CROCCP4-202ENST00000633627 VIRMAQ69YN4 1812 aaKnown RBP25.71■■□□□ 1.71
CROCCP4-202ENST00000633627 RGPD3A6NKT7 1758 aaPredicted RBP25.71■■□□□ 1.71
CROCCP4-202ENST00000633627 RGPD4Q7Z3J3 1758 aa25.71■■□□□ 1.71
CROCCP4-202ENST00000633627 EZH2Q15910 746 aaKnown RBP25.7■■□□□ 1.7
CROCCP4-202ENST00000633627 NFE2L2Q16236 605 aa25.7■■□□□ 1.7
CROCCP4-202ENST00000633627 CCDC146Q8IYE0 955 aa25.7■■□□□ 1.7
CROCCP4-202ENST00000633627 RUNDC1Q96C34 613 aa25.7■■□□□ 1.7
CROCCP4-202ENST00000633627 TMOD3Q9NYL9 352 aa25.7■■□□□ 1.7
CROCCP4-202ENST00000633627 CABP4P57796 275 aa25.68■■□□□ 1.7
CROCCP4-202ENST00000633627 PROM2Q8N271 834 aa25.68■■□□□ 1.7
CROCCP4-202ENST00000633627 DLG5Q8TDM6 1919 aa25.68■■□□□ 1.7
CROCCP4-202ENST00000633627 MRC1P22897 1456 aa25.67■■□□□ 1.7
CROCCP4-202ENST00000633627 CCER2I3L3R5 266 aa25.67■■□□□ 1.7
CROCCP4-202ENST00000633627 HTATSF1O43719 755 aaKnown RBP25.67■■□□□ 1.7
CROCCP4-202ENST00000633627 CEMIPQ8WUJ3 1361 aa25.67■■□□□ 1.7
CROCCP4-202ENST00000633627 NFATC2IPQ8NCF5 419 aa25.66■■□□□ 1.7
CROCCP4-202ENST00000633627 SLC52A2Q9HAB3 445 aa25.66■■□□□ 1.7
CROCCP4-202ENST00000633627 TMPOP42166 694 aaKnown RBP25.65■■□□□ 1.7
CROCCP4-202ENST00000633627 RREB1Q92766 1687 aa25.64■■□□□ 1.7
CROCCP4-202ENST00000633627 TXNRD1Q16881 649 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms