RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 ATP5J2-PTCD1G3V325 749 aa5.09□□□□□ -1.59
SCARNA4-201ENST00000629045 SPINT1O43278 529 aa5.09□□□□□ -1.59
SCARNA4-201ENST00000629045 CTSOP43234 321 aaPredicted RBP5.09□□□□□ -1.59
SCARNA4-201ENST00000629045 DEPDC4Q8N2C3 294 aa5.09□□□□□ -1.59
SCARNA4-201ENST00000629045 ARHGEF10LQ9HCE6 1279 aa5.09□□□□□ -1.59
SCARNA4-201ENST00000629045 DNMT3LQ9UJW3 386 aa5.09□□□□□ -1.59
SCARNA4-201ENST00000629045 CHIC2Q9UKJ5 165 aa5.09□□□□□ -1.59
SCARNA4-201ENST00000629045 ZNF777Q9ULD5 760 aaPredicted RBP5.09□□□□□ -1.59
SCARNA4-201ENST00000629045 SOS2Q07890 1332 aaPredicted RBP5.08□□□□□ -1.6
SCARNA4-201ENST00000629045 FIGNL2A6NMB9 653 aa5.08□□□□□ -1.6
SCARNA4-201ENST00000629045 USP17L5A8MUK1 530 aa5.08□□□□□ -1.6
SCARNA4-201ENST00000629045 MEN1O00255 615 aa5.08□□□□□ -1.6
SCARNA4-201ENST00000629045 MYCP01106 439 aaPredicted RBP5.08□□□□□ -1.6
SCARNA4-201ENST00000629045 PTGIRP43119 386 aa5.08□□□□□ -1.6
SCARNA4-201ENST00000629045 TBC1D9Q6ZT07 1266 aa5.08□□□□□ -1.6
SCARNA4-201ENST00000629045 CYP2U1Q7Z449 544 aa5.08□□□□□ -1.6
SCARNA4-201ENST00000629045 KIFC2Q96AC6 838 aa5.08□□□□□ -1.6
SCARNA4-201ENST00000629045 CALR3Q96L12 384 aaKnown RBP5.08□□□□□ -1.6
SCARNA4-201ENST00000629045 POLMQ9NP87 494 aaPredicted RBP5.08□□□□□ -1.6
SCARNA4-201ENST00000629045 USP17L3A6NCW0 530 aa5.07□□□□□ -1.6
SCARNA4-201ENST00000629045 USP17L4A6NCW7 530 aa5.07□□□□□ -1.6
SCARNA4-201ENST00000629045 TTLL8A6PVC2 850 aa5.07□□□□□ -1.6
SCARNA4-201ENST00000629045 MAN1A2O60476 641 aa5.07□□□□□ -1.6
SCARNA4-201ENST00000629045 NCOA4Q13772 614 aa5.07□□□□□ -1.6
SCARNA4-201ENST00000629045 FOXD4L5Q5VV16 416 aaPredicted RBP5.07□□□□□ -1.6
SCARNA4-201ENST00000629045 USP17L2Q6R6M4 530 aa5.07□□□□□ -1.6
SCARNA4-201ENST00000629045 USP17L1Q7RTZ2 530 aa5.07□□□□□ -1.6
SCARNA4-201ENST00000629045 C14orf37Q86TY3 774 aa5.07□□□□□ -1.6
SCARNA4-201ENST00000629045 CCDC125Q86Z20 511 aa5.07□□□□□ -1.6
SCARNA4-201ENST00000629045 ZMYND15Q9H091 742 aa5.07□□□□□ -1.6
SCARNA4-201ENST00000629045 A0A1W2PRU2 124 aa5.06□□□□□ -1.6
SCARNA4-201ENST00000629045 ARID3CA6NKF2 412 aa5.06□□□□□ -1.6
SCARNA4-201ENST00000629045 VEGFBP49765 207 aa5.06□□□□□ -1.6
SCARNA4-201ENST00000629045 MAP7D1Q3KQU3 841 aa5.06□□□□□ -1.6
SCARNA4-201ENST00000629045 RNF217Q8TC41 542 aa5.06□□□□□ -1.6
SCARNA4-201ENST00000629045 ESF1Q9H501 851 aaKnown RBP5.06□□□□□ -1.6
SCARNA4-201ENST00000629045 ATP9BO43861 1147 aa5.05□□□□□ -1.6
SCARNA4-201ENST00000629045 IL2RAP01589 272 aa5.05□□□□□ -1.6
SCARNA4-201ENST00000629045 USP4Q13107 963 aa5.05□□□□□ -1.6
SCARNA4-201ENST00000629045 CLN3Q13286 438 aa5.05□□□□□ -1.6
SCARNA4-201ENST00000629045 EML3Q32P44 896 aa5.05□□□□□ -1.6
SCARNA4-201ENST00000629045 NFATC2IPQ8NCF5 419 aa5.05□□□□□ -1.6
SCARNA4-201ENST00000629045 ZNF775Q96BV0 537 aaPredicted RBP5.05□□□□□ -1.6
SCARNA4-201ENST00000629045 PALM3A6NDB9 673 aaPredicted RBP5.04□□□□□ -1.6
SCARNA4-201ENST00000629045 SCNN1DP51172 638 aa5.04□□□□□ -1.6
SCARNA4-201ENST00000629045 GTF2IP78347 998 aa5.04□□□□□ -1.6
SCARNA4-201ENST00000629045 PPP1R12CQ9BZL4 782 aa5.04□□□□□ -1.6
SCARNA4-201ENST00000629045 ETNK1Q9HBU6 452 aa5.04□□□□□ -1.6
SCARNA4-201ENST00000629045 TFIP11Q9UBB9 837 aaKnown RBP5.04□□□□□ -1.6
SCARNA4-201ENST00000629045 MAFBQ9Y5Q3 323 aaPredicted RBP5.04□□□□□ -1.6
SCARNA4-201ENST00000629045 GNRH1P01148 92 aa5.03□□□□□ -1.6
SCARNA4-201ENST00000629045 RHOQP17081 205 aa5.03□□□□□ -1.6
SCARNA4-201ENST00000629045 PSME1Q06323 249 aa5.03□□□□□ -1.6
SCARNA4-201ENST00000629045 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.03□□□□□ -1.6
SCARNA4-201ENST00000629045 PRICKLE2Q7Z3G6 844 aa5.03□□□□□ -1.6
SCARNA4-201ENST00000629045 CNKSR1Q969H4 720 aa5.03□□□□□ -1.6
SCARNA4-201ENST00000629045 TRIM52Q96A61 297 aa5.03□□□□□ -1.6
SCARNA4-201ENST00000629045 NLRP3Q96P20 1036 aa5.03□□□□□ -1.6
SCARNA4-201ENST00000629045 KIAA1024Q9UPX6 916 aa5.03□□□□□ -1.6
SCARNA4-201ENST00000629045 NOD1Q9Y239 953 aa5.03□□□□□ -1.6
SCARNA4-201ENST00000629045 GDF10P55107 478 aa5.02□□□□□ -1.61
SCARNA4-201ENST00000629045 PTSQ03393 145 aa5.02□□□□□ -1.61
SCARNA4-201ENST00000629045 SLC27A3Q5K4L6 730 aa5.02□□□□□ -1.61
SCARNA4-201ENST00000629045 PLEKHM2Q8IWE5 1019 aa5.02□□□□□ -1.61
SCARNA4-201ENST00000629045 SIRT1Q96EB6 747 aa5.02□□□□□ -1.61
SCARNA4-201ENST00000629045 ZNF594Q96JF6 807 aaPredicted RBP5.02□□□□□ -1.61
SCARNA4-201ENST00000629045 TIMELESSQ9UNS1 1208 aa5.02□□□□□ -1.61
SCARNA4-201ENST00000629045 PCDHGA11Q9Y5H2 935 aa5.02□□□□□ -1.61
SCARNA4-201ENST00000629045 TMEM229AB2RXF0 380 aa5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 LMOD1P29536 600 aaPredicted RBP5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 RNF144AP50876 292 aaPredicted RBP5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 CLDN10P78369 228 aa5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 TLR1Q15399 786 aa5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 CFAP70Q5T0N1 1121 aa5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 LCE2CQ5TA81 110 aa5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 LYSMD3Q7Z3D4 306 aa5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 ESYT1Q9BSJ8 1104 aa5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 C1orf115Q9H7X2 142 aa5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 MKRN1Q9UHC7 482 aaKnown RBP5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 SERTAD1Q9UHV2 236 aa5.01□□□□□ -1.61
SCARNA4-201ENST00000629045 SENP3-EIF4A1A0A087X0R7 540 aa5□□□□□ -1.61
SCARNA4-201ENST00000629045 TERTO14746 1132 aaKnown RBP5□□□□□ -1.61
SCARNA4-201ENST00000629045 INHAP05111 366 aa5□□□□□ -1.61
SCARNA4-201ENST00000629045 RFX1P22670 979 aa5□□□□□ -1.61
SCARNA4-201ENST00000629045 NFX1Q12986 1120 aaKnown RBP5□□□□□ -1.61
SCARNA4-201ENST00000629045 ESCO1Q5FWF5 840 aa5□□□□□ -1.61
SCARNA4-201ENST00000629045 OGFOD1Q8N543 542 aa5□□□□□ -1.61
SCARNA4-201ENST00000629045 SERBP1Q8NC51 408 aaKnown RBP eCLIP5□□□□□ -1.61
SCARNA4-201ENST00000629045 TPCN2Q8NHX9 752 aa5□□□□□ -1.61
SCARNA4-201ENST00000629045 XAGE2Q96GT9 111 aa5□□□□□ -1.61
SCARNA4-201ENST00000629045 FHDC1Q9C0D6 1143 aaPredicted RBP5□□□□□ -1.61
SCARNA4-201ENST00000629045 NXF1Q9UBU9 619 aaKnown RBP5□□□□□ -1.61
SCARNA4-201ENST00000629045 HRH3Q9Y5N1 445 aa5□□□□□ -1.61
SCARNA4-201ENST00000629045 H3BM21 787 aa4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 LZTS3O60299 673 aaPredicted RBP4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 GPC1P35052 558 aa4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 CENPCQ03188 943 aa4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 POU4F2Q12837 409 aa4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 CRTC2Q53ET0 693 aaPredicted RBP4.99□□□□□ -1.61
SCARNA4-201ENST00000629045 CDCA8Q53HL2 280 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms