RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 WNK3Q9BYP7 1800 aa9.28□□□□□ -0.92
LINC00649-220ENST00000628906 WASLO00401 505 aaPredicted RBP9.27□□□□□ -0.93
LINC00649-220ENST00000628906 DLL1O00548 723 aa9.27□□□□□ -0.93
LINC00649-220ENST00000628906 TGFB2P61812 414 aa9.27□□□□□ -0.93
LINC00649-220ENST00000628906 CFAP44Q96MT7 982 aa9.27□□□□□ -0.93
LINC00649-220ENST00000628906 POGKQ9P215 609 aa9.27□□□□□ -0.93
LINC00649-220ENST00000628906 ROCK1Q13464 1354 aa9.26□□□□□ -0.93
LINC00649-220ENST00000628906 C14orf93Q9H972 538 aaKnown RBP9.26□□□□□ -0.93
LINC00649-220ENST00000628906 COL18A1P39060 1754 aa9.25□□□□□ -0.93
LINC00649-220ENST00000628906 MAP2K1Q02750 393 aaPredicted RBP9.25□□□□□ -0.93
LINC00649-220ENST00000628906 GCC1Q96CN9 775 aa9.25□□□□□ -0.93
LINC00649-220ENST00000628906 PIK3C2GO75747 1445 aa9.24□□□□□ -0.93
LINC00649-220ENST00000628906 RNF181Q9P0P0 153 aa9.24□□□□□ -0.93
LINC00649-220ENST00000628906 POLR3AO14802 1390 aaPredicted RBP9.24□□□□□ -0.93
LINC00649-220ENST00000628906 CCDC7Q96M83 1385 aa9.24□□□□□ -0.93
LINC00649-220ENST00000628906 ABCC6O95255 1503 aa9.23□□□□□ -0.93
LINC00649-220ENST00000628906 A0A0G2JLW4 131 aa9.23□□□□□ -0.93
LINC00649-220ENST00000628906 GLTPD2A6NH11 291 aa9.23□□□□□ -0.93
LINC00649-220ENST00000628906 POTECB2RU33 542 aa9.23□□□□□ -0.93
LINC00649-220ENST00000628906 FCHSD2O94868 740 aa9.23□□□□□ -0.93
LINC00649-220ENST00000628906 FAM50AQ14320 339 aaKnown RBP9.23□□□□□ -0.93
LINC00649-220ENST00000628906 NUDT16Q96DE0 195 aaKnown RBP9.23□□□□□ -0.93
LINC00649-220ENST00000628906 MCOLN1Q9GZU1 580 aa9.23□□□□□ -0.93
LINC00649-220ENST00000628906 CCNL1Q9UK58 526 aaPredicted RBP9.23□□□□□ -0.93
LINC00649-220ENST00000628906 ZC3H4Q9UPT8 1303 aaKnown RBP9.23□□□□□ -0.93
LINC00649-220ENST00000628906 VIRMAQ69YN4 1812 aaKnown RBP9.22□□□□□ -0.93
LINC00649-220ENST00000628906 ZBTB7CA1YPR0 619 aa9.22□□□□□ -0.93
LINC00649-220ENST00000628906 HMGB2P26583 209 aaKnown RBP9.22□□□□□ -0.93
LINC00649-220ENST00000628906 HABP4Q5JVS0 413 aaKnown RBP9.22□□□□□ -0.93
LINC00649-220ENST00000628906 ACEP12821 1306 aa9.22□□□□□ -0.93
LINC00649-220ENST00000628906 PKD1L3Q7Z443 1732 aa9.22□□□□□ -0.93
LINC00649-220ENST00000628906 MINK1Q8N4C8 1332 aaPredicted RBP9.21□□□□□ -0.94
LINC00649-220ENST00000628906 PPIP5K1Q6PFW1 1433 aa9.21□□□□□ -0.94
LINC00649-220ENST00000628906 PIK3C2AO00443 1686 aa9.2□□□□□ -0.94
LINC00649-220ENST00000628906 LY75O60449 1722 aa9.2□□□□□ -0.94
LINC00649-220ENST00000628906 PLEKHG3A1L390 1219 aa9.2□□□□□ -0.94
LINC00649-220ENST00000628906 CSB-PGBD3P0DP91 1061 aa9.2□□□□□ -0.94
LINC00649-220ENST00000628906 CHADLQ6NUI6 762 aa9.2□□□□□ -0.94
LINC00649-220ENST00000628906 ERBB3P21860 1342 aa9.2□□□□□ -0.94
LINC00649-220ENST00000628906 SLC4A2P04920 1241 aa9.19□□□□□ -0.94
LINC00649-220ENST00000628906 KCNA3P22001 575 aa9.19□□□□□ -0.94
LINC00649-220ENST00000628906 PRIM1P49642 420 aaKnown RBP9.19□□□□□ -0.94
LINC00649-220ENST00000628906 RGL3Q3MIN7 710 aa9.19□□□□□ -0.94
LINC00649-220ENST00000628906 CFAP70Q5T0N1 1121 aa9.19□□□□□ -0.94
LINC00649-220ENST00000628906 SMIM5Q71RC9 77 aa9.19□□□□□ -0.94
LINC00649-220ENST00000628906 ARHGEF25Q86VW2 580 aa9.19□□□□□ -0.94
LINC00649-220ENST00000628906 PASKQ96RG2 1323 aa9.19□□□□□ -0.94
LINC00649-220ENST00000628906 SPATA31E1Q6ZUB1 1445 aa9.19□□□□□ -0.94
LINC00649-220ENST00000628906 KIAA1551Q9HCM1 1747 aa9.19□□□□□ -0.94
LINC00649-220ENST00000628906 IL2RBP14784 551 aa9.18□□□□□ -0.94
LINC00649-220ENST00000628906 DPEP1P16444 411 aa9.18□□□□□ -0.94
LINC00649-220ENST00000628906 DCAF5Q96JK2 942 aa9.18□□□□□ -0.94
LINC00649-220ENST00000628906 PITPNM2Q9BZ72 1349 aa9.18□□□□□ -0.94
LINC00649-220ENST00000628906 QRICH2Q9H0J4 1663 aa9.18□□□□□ -0.94
LINC00649-220ENST00000628906 KIF13BQ9NQT8 1826 aa9.18□□□□□ -0.94
LINC00649-220ENST00000628906 SBF1O95248 1867 aa9.17□□□□□ -0.94
LINC00649-220ENST00000628906 RASSF10A6NK89 507 aa9.17□□□□□ -0.94
LINC00649-220ENST00000628906 TMEM88BA6NKF7 163 aa9.17□□□□□ -0.94
LINC00649-220ENST00000628906 DEFB115Q30KQ5 88 aa9.17□□□□□ -0.94
LINC00649-220ENST00000628906 AMIGO3Q86WK7 504 aa9.17□□□□□ -0.94
LINC00649-220ENST00000628906 CCDC61Q9Y6R9 512 aa9.17□□□□□ -0.94
LINC00649-220ENST00000628906 N4BP2Q86UW6 1770 aaPredicted RBP9.17□□□□□ -0.94
LINC00649-220ENST00000628906 USP54Q70EL1 1684 aa9.16□□□□□ -0.94
LINC00649-220ENST00000628906 NSD2O96028 1365 aa9.16□□□□□ -0.94
LINC00649-220ENST00000628906 ANKRD36BQ8N2N9 1353 aa9.16□□□□□ -0.94
LINC00649-220ENST00000628906 SZT2Q5T011 3432 aa9.16□□□□□ -0.94
LINC00649-220ENST00000628906 WDR33Q9C0J8 1336 aaKnown RBP9.16□□□□□ -0.94
LINC00649-220ENST00000628906 NLRP6P59044 892 aa9.16□□□□□ -0.94
LINC00649-220ENST00000628906 SYTL4Q96C24 671 aaPredicted RBP9.16□□□□□ -0.94
LINC00649-220ENST00000628906 KDM6AO15550 1401 aaPredicted RBP9.15□□□□□ -0.94
LINC00649-220ENST00000628906 ARFGEF1Q9Y6D6 1849 aa9.15□□□□□ -0.94
LINC00649-220ENST00000628906 FXR1P51114 621 aaKnown RBP eCLIP9.15□□□□□ -0.94
LINC00649-220ENST00000628906 PIM2Q9P1W9 311 aa9.15□□□□□ -0.94
LINC00649-220ENST00000628906 SLIT3O75094 1523 aa9.15□□□□□ -0.95
LINC00649-220ENST00000628906 BRCA1P38398 1863 aaKnown RBP9.15□□□□□ -0.95
LINC00649-220ENST00000628906 CPSF1Q10570 1443 aaKnown RBP9.14□□□□□ -0.95
LINC00649-220ENST00000628906 ITSN1Q15811 1721 aa9.14□□□□□ -0.95
LINC00649-220ENST00000628906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.14□□□□□ -0.95
LINC00649-220ENST00000628906 ITGBL1O95965 494 aaPredicted RBP9.14□□□□□ -0.95
LINC00649-220ENST00000628906 MMP10P09238 476 aa9.14□□□□□ -0.95
LINC00649-220ENST00000628906 SOX10P56693 466 aa9.14□□□□□ -0.95
LINC00649-220ENST00000628906 MPNDQ8N594 471 aa9.14□□□□□ -0.95
LINC00649-220ENST00000628906 BEGAINQ9BUH8 593 aa9.14□□□□□ -0.95
LINC00649-220ENST00000628906 TRAK1Q9UPV9 953 aa9.14□□□□□ -0.95
LINC00649-220ENST00000628906 POTEIP0CG38 1075 aa9.13□□□□□ -0.95
LINC00649-220ENST00000628906 POTEJP0CG39 1038 aa9.13□□□□□ -0.95
LINC00649-220ENST00000628906 SSFA2P28290 1259 aa9.13□□□□□ -0.95
LINC00649-220ENST00000628906 DGKZQ13574 1117 aa9.13□□□□□ -0.95
LINC00649-220ENST00000628906 DALRD3Q5D0E6 543 aaKnown RBP9.13□□□□□ -0.95
LINC00649-220ENST00000628906 SLC17A8Q8NDX2 589 aa9.13□□□□□ -0.95
LINC00649-220ENST00000628906 DDX54Q8TDD1 881 aaKnown RBP9.13□□□□□ -0.95
LINC00649-220ENST00000628906 USP47Q96K76 1375 aa9.12□□□□□ -0.95
LINC00649-220ENST00000628906 RGPD5Q99666 1765 aa9.12□□□□□ -0.95
LINC00649-220ENST00000628906 ZBTB22O15209 634 aa9.12□□□□□ -0.95
LINC00649-220ENST00000628906 LMNB1P20700 586 aa9.12□□□□□ -0.95
LINC00649-220ENST00000628906 DPY19L2Q6NUT2 758 aa9.12□□□□□ -0.95
LINC00649-220ENST00000628906 CDK19Q9BWU1 502 aa9.12□□□□□ -0.95
LINC00649-220ENST00000628906 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
LINC00649-220ENST00000628906 KCNH5Q8NCM2 988 aa9.11□□□□□ -0.95
LINC00649-220ENST00000628906 CASP8AP2Q9UKL3 1982 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms