RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 USHBP1Q8N6Y0 703 aa16.74■□□□□ 0.27
UBR1-212ENST00000627960 EMILIN1Q9Y6C2 1016 aa16.74■□□□□ 0.27
UBR1-212ENST00000627960 CASZ1Q86V15 1759 aa16.74■□□□□ 0.27
UBR1-212ENST00000627960 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
UBR1-212ENST00000627960 STK32BQ9NY57 414 aa16.73■□□□□ 0.27
UBR1-212ENST00000627960 RAPGEF4Q8WZA2 1011 aa16.72■□□□□ 0.27
UBR1-212ENST00000627960 SPON1Q9HCB6 807 aa16.72■□□□□ 0.27
UBR1-212ENST00000627960 DOT1LQ8TEK3 1739 aa16.72■□□□□ 0.27
UBR1-212ENST00000627960 TATP17735 454 aaPredicted RBP16.71■□□□□ 0.27
UBR1-212ENST00000627960 SLC15A2Q16348 729 aa16.71■□□□□ 0.27
UBR1-212ENST00000627960 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
UBR1-212ENST00000627960 PRIM1P49642 420 aaKnown RBP16.7■□□□□ 0.26
UBR1-212ENST00000627960 PDGFDQ9GZP0 370 aaPredicted RBP16.7■□□□□ 0.26
UBR1-212ENST00000627960 PANK3Q9H999 370 aa16.7■□□□□ 0.26
UBR1-212ENST00000627960 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
UBR1-212ENST00000627960 POLKQ9UBT6 870 aa16.69■□□□□ 0.26
UBR1-212ENST00000627960 PAPPAQ13219 1627 aa16.69■□□□□ 0.26
UBR1-212ENST00000627960 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
UBR1-212ENST00000627960 LRRC4BQ9NT99 713 aa16.67■□□□□ 0.26
UBR1-212ENST00000627960 PPP1R1BQ9UD71 204 aaPredicted RBP16.67■□□□□ 0.26
UBR1-212ENST00000627960 LY75O60449 1722 aa16.67■□□□□ 0.26
UBR1-212ENST00000627960 NSD2O96028 1365 aa16.66■□□□□ 0.26
UBR1-212ENST00000627960 NCAPD2Q15021 1401 aa16.66■□□□□ 0.26
UBR1-212ENST00000627960 SLC27A3Q5K4L6 730 aa16.66■□□□□ 0.26
UBR1-212ENST00000627960 PKD1L3Q7Z443 1732 aa16.65■□□□□ 0.26
UBR1-212ENST00000627960 ZBTB7AO95365 584 aa16.65■□□□□ 0.26
UBR1-212ENST00000627960 TNNT2P45379 298 aaPredicted RBP16.65■□□□□ 0.26
UBR1-212ENST00000627960 PCDH11XQ9BZA7 1347 aa16.65■□□□□ 0.26
UBR1-212ENST00000627960 PCDH11YQ9BZA8 1340 aa16.65■□□□□ 0.26
UBR1-212ENST00000627960 EYA1Q99502 592 aa16.64■□□□□ 0.25
UBR1-212ENST00000627960 QSER1Q2KHR3 1735 aa16.63■□□□□ 0.25
UBR1-212ENST00000627960 CYP27B1O15528 508 aa16.63■□□□□ 0.25
UBR1-212ENST00000627960 ZNF827Q17R98 1081 aa16.63■□□□□ 0.25
UBR1-212ENST00000627960 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
UBR1-212ENST00000627960 ITGB4P16144 1822 aa16.62■□□□□ 0.25
UBR1-212ENST00000627960 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
UBR1-212ENST00000627960 PTGER2P43116 358 aa16.61■□□□□ 0.25
UBR1-212ENST00000627960 EIF4A2Q14240 407 aaKnown RBP16.61■□□□□ 0.25
UBR1-212ENST00000627960 MTFR1LQ9H019 292 aa16.61■□□□□ 0.25
UBR1-212ENST00000627960 TOGARAM1Q9Y4F4 1720 aa16.6■□□□□ 0.25
UBR1-212ENST00000627960 KCNQ4P56696 695 aa16.6■□□□□ 0.25
UBR1-212ENST00000627960 MORC1Q86VD1 984 aa16.6■□□□□ 0.25
UBR1-212ENST00000627960 SPG7Q9UQ90 795 aa16.6■□□□□ 0.25
UBR1-212ENST00000627960 KNSTRNQ9Y448 316 aa16.6■□□□□ 0.25
UBR1-212ENST00000627960 TUBGCP6Q96RT7 1819 aa16.59■□□□□ 0.25
UBR1-212ENST00000627960 NKX1-1Q15270 411 aaPredicted RBP16.59■□□□□ 0.25
UBR1-212ENST00000627960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.59■□□□□ 0.25
UBR1-212ENST00000627960 CCNL1Q9UK58 526 aaPredicted RBP16.59■□□□□ 0.25
UBR1-212ENST00000627960 KIF7Q2M1P5 1343 aa16.59■□□□□ 0.25
UBR1-212ENST00000627960 MPRIPQ6WCQ1 1025 aa16.58■□□□□ 0.24
UBR1-212ENST00000627960 SGIP1Q9BQI5 828 aa16.58■□□□□ 0.24
UBR1-212ENST00000627960 PNPLA7Q6ZV29 1317 aa16.56■□□□□ 0.24
UBR1-212ENST00000627960 IGSF1Q8N6C5 1336 aa16.56■□□□□ 0.24
UBR1-212ENST00000627960 SLC16A10Q8TF71 515 aa16.56■□□□□ 0.24
UBR1-212ENST00000627960 TFCP2L1Q9NZI6 479 aa16.56■□□□□ 0.24
UBR1-212ENST00000627960 TAF1LQ8IZX4 1826 aa16.56■□□□□ 0.24
UBR1-212ENST00000627960 AMER1Q5JTC6 1135 aaPredicted RBP16.55■□□□□ 0.24
UBR1-212ENST00000627960 IFNL2Q8IZJ0 200 aa16.55■□□□□ 0.24
UBR1-212ENST00000627960 COL24A1Q17RW2 1714 aa16.55■□□□□ 0.24
UBR1-212ENST00000627960 PLEKHG2Q9H7P9 1386 aa16.54■□□□□ 0.24
UBR1-212ENST00000627960 C5P01031 1676 aa16.54■□□□□ 0.24
UBR1-212ENST00000627960 PHKG2P15735 406 aa16.54■□□□□ 0.24
UBR1-212ENST00000627960 PIGBQ92521 554 aa16.54■□□□□ 0.24
UBR1-212ENST00000627960 PALLDQ8WX93 1383 aa16.53■□□□□ 0.24
UBR1-212ENST00000627960 DCAF8L1A6NGE4 600 aa16.53■□□□□ 0.24
UBR1-212ENST00000627960 HMGB2P26583 209 aaKnown RBP16.53■□□□□ 0.24
UBR1-212ENST00000627960 SMARCC1Q92922 1105 aaPredicted RBP16.53■□□□□ 0.24
UBR1-212ENST00000627960 ARXQ96QS3 562 aa16.53■□□□□ 0.24
UBR1-212ENST00000627960 SYT17Q9BSW7 474 aa16.52■□□□□ 0.24
UBR1-212ENST00000627960 FHDC1Q9C0D6 1143 aaPredicted RBP16.52■□□□□ 0.24
UBR1-212ENST00000627960 PER1O15534 1290 aaPredicted RBP16.51■□□□□ 0.23
UBR1-212ENST00000627960 PLEKHO1Q53GL0 409 aaPredicted RBP16.5■□□□□ 0.23
UBR1-212ENST00000627960 COL23A1Q86Y22 540 aaPredicted RBP16.5■□□□□ 0.23
UBR1-212ENST00000627960 TMOD3Q9NYL9 352 aa16.5■□□□□ 0.23
UBR1-212ENST00000627960 IL13P35225 146 aa16.49■□□□□ 0.23
UBR1-212ENST00000627960 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
UBR1-212ENST00000627960 POLD1P28340 1107 aa16.48■□□□□ 0.23
UBR1-212ENST00000627960 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
UBR1-212ENST00000627960 AEBP1Q8IUX7 1158 aa16.48■□□□□ 0.23
UBR1-212ENST00000627960 MSH5O43196 834 aa16.47■□□□□ 0.23
UBR1-212ENST00000627960 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
UBR1-212ENST00000627960 SULT6B1Q6IMI4 303 aa16.47■□□□□ 0.23
UBR1-212ENST00000627960 ASAP1Q9ULH1 1129 aa16.47■□□□□ 0.23
UBR1-212ENST00000627960 MAP3K5Q99683 1374 aa16.47■□□□□ 0.23
UBR1-212ENST00000627960 LOC102724428A0A0B4J2F2 783 aa16.46■□□□□ 0.23
UBR1-212ENST00000627960 ERVV-2B6SEH9 535 aa16.46■□□□□ 0.23
UBR1-212ENST00000627960 MTHFSP49914 203 aa16.46■□□□□ 0.23
UBR1-212ENST00000627960 SIK1P57059 783 aa16.46■□□□□ 0.23
UBR1-212ENST00000627960 CC2D1BQ5T0F9 858 aaKnown RBP16.46■□□□□ 0.23
UBR1-212ENST00000627960 ZNF530Q6P9A1 599 aaPredicted RBP16.46■□□□□ 0.23
UBR1-212ENST00000627960 FLAD1Q8NFF5 587 aa16.46■□□□□ 0.23
UBR1-212ENST00000627960 DCAF5Q96JK2 942 aa16.46■□□□□ 0.23
UBR1-212ENST00000627960 ATG3Q9NT62 314 aa16.46■□□□□ 0.23
UBR1-212ENST00000627960 UBR3Q6ZT12 1888 aa16.46■□□□□ 0.22
UBR1-212ENST00000627960 KDRP35968 1356 aa16.45■□□□□ 0.22
UBR1-212ENST00000627960 AK7Q96M32 723 aa16.44■□□□□ 0.22
UBR1-212ENST00000627960 NPC1L1Q9UHC9 1359 aa16.43■□□□□ 0.22
UBR1-212ENST00000627960 YY1P25490 414 aa16.43■□□□□ 0.22
UBR1-212ENST00000627960 LINC00116Q8NCU8 138 aa16.43■□□□□ 0.22
UBR1-212ENST00000627960 KDM6AO15550 1401 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms