RNA–Protein interactions for RNA: ENST00000627740.1

APLF-207, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,180 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-207ENST00000627740 GLI3P10071 1580 aa13.12□□□□□ -0.31
APLF-207ENST00000627740 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
APLF-207ENST00000627740 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
APLF-207ENST00000627740 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
APLF-207ENST00000627740 DLG5Q8TDM6 1919 aa13.11□□□□□ -0.31
APLF-207ENST00000627740 DISP2A7MBM2 1401 aa13.11□□□□□ -0.31
APLF-207ENST00000627740 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
APLF-207ENST00000627740 PLEKHO1Q53GL0 409 aaPredicted RBP13.1□□□□□ -0.31
APLF-207ENST00000627740 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.31
APLF-207ENST00000627740 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
APLF-207ENST00000627740 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
APLF-207ENST00000627740 THSD7AQ9UPZ6 1657 aa13.09□□□□□ -0.31
APLF-207ENST00000627740 SHANK3Q9BYB0 1731 aa13.09□□□□□ -0.31
APLF-207ENST00000627740 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.31
APLF-207ENST00000627740 LRRC37A3O60309 1634 aa13.08□□□□□ -0.32
APLF-207ENST00000627740 FAM98CQ17RN3 349 aaKnown RBP13.08□□□□□ -0.32
APLF-207ENST00000627740 VIRMAQ69YN4 1812 aaKnown RBP13.08□□□□□ -0.32
APLF-207ENST00000627740 APAF1O14727 1248 aa13.07□□□□□ -0.32
APLF-207ENST00000627740 RBM6P78332 1123 aaKnown RBP13.07□□□□□ -0.32
APLF-207ENST00000627740 NFE2L2Q16236 605 aa13.07□□□□□ -0.32
APLF-207ENST00000627740 MTHFSDQ2M296 383 aaKnown RBP13.07□□□□□ -0.32
APLF-207ENST00000627740 ZCRB1Q8TBF4 217 aaKnown RBP13.07□□□□□ -0.32
APLF-207ENST00000627740 TNS2Q63HR2 1409 aa13.07□□□□□ -0.32
APLF-207ENST00000627740 TMPOP42166 694 aaKnown RBP13.06□□□□□ -0.32
APLF-207ENST00000627740 NGEFQ8N5V2 710 aa13.06□□□□□ -0.32
APLF-207ENST00000627740 RGS17Q9UGC6 210 aaPredicted RBP13.06□□□□□ -0.32
APLF-207ENST00000627740 PCDH11XQ9BZA7 1347 aa13.06□□□□□ -0.32
APLF-207ENST00000627740 PCDH11YQ9BZA8 1340 aa13.06□□□□□ -0.32
APLF-207ENST00000627740 EXOC5O00471 708 aa13.05□□□□□ -0.32
APLF-207ENST00000627740 DDB1Q16531 1140 aa13.05□□□□□ -0.32
APLF-207ENST00000627740 ZNF530Q6P9A1 599 aaPredicted RBP13.05□□□□□ -0.32
APLF-207ENST00000627740 A0A0G2JS52 829 aa13.05□□□□□ -0.32
APLF-207ENST00000627740 ONECUT3O60422 494 aaPredicted RBP13.05□□□□□ -0.32
APLF-207ENST00000627740 MYT1Q01538 1121 aa13.05□□□□□ -0.32
APLF-207ENST00000627740 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
APLF-207ENST00000627740 C1orf141Q5JVX7 400 aa13.05□□□□□ -0.32
APLF-207ENST00000627740 RXRBP28702 533 aa13.04□□□□□ -0.32
APLF-207ENST00000627740 RIPK4P57078 832 aa13.04□□□□□ -0.32
APLF-207ENST00000627740 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
APLF-207ENST00000627740 LMOD3Q0VAK6 560 aa13.04□□□□□ -0.32
APLF-207ENST00000627740 NEUROD2Q15784 382 aa13.04□□□□□ -0.32
APLF-207ENST00000627740 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
APLF-207ENST00000627740 IFNL2Q8IZJ0 200 aa13.04□□□□□ -0.32
APLF-207ENST00000627740 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
APLF-207ENST00000627740 MAP3K5Q99683 1374 aa13.03□□□□□ -0.32
APLF-207ENST00000627740 SCN11AQ9UI33 1791 aa13.03□□□□□ -0.32
APLF-207ENST00000627740 BRWD3Q6RI45 1802 aa13.03□□□□□ -0.32
APLF-207ENST00000627740 GNAT3A8MTJ3 354 aa13.03□□□□□ -0.32
APLF-207ENST00000627740 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
APLF-207ENST00000627740 HSP90AB1P08238 724 aaKnown RBP13.02□□□□□ -0.33
APLF-207ENST00000627740 PHKG2P15735 406 aa13.02□□□□□ -0.33
APLF-207ENST00000627740 POTEAQ6S8J7 498 aa13.02□□□□□ -0.33
APLF-207ENST00000627740 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
APLF-207ENST00000627740 CYP27B1O15528 508 aa13.01□□□□□ -0.33
APLF-207ENST00000627740 CCDC27Q2M243 656 aa13.01□□□□□ -0.33
APLF-207ENST00000627740 SEPT12Q8IYM1 358 aa13.01□□□□□ -0.33
APLF-207ENST00000627740 DDX54Q8TDD1 881 aaKnown RBP13.01□□□□□ -0.33
APLF-207ENST00000627740 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
APLF-207ENST00000627740 PDE3BQ13370 1112 aa13.01□□□□□ -0.33
APLF-207ENST00000627740 YTHDC1Q96MU7 727 aaKnown RBP13.01□□□□□ -0.33
APLF-207ENST00000627740 KAT6BQ8WYB5 2073 aa13.01□□□□□ -0.33
APLF-207ENST00000627740 SENP3-EIF4A1A0A087X0R7 540 aa13□□□□□ -0.33
APLF-207ENST00000627740 SALL2Q9Y467 1007 aaPredicted RBP13□□□□□ -0.33
APLF-207ENST00000627740 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
APLF-207ENST00000627740 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
APLF-207ENST00000627740 DCAF5Q96JK2 942 aa12.99□□□□□ -0.33
APLF-207ENST00000627740 ZBED9Q6R2W3 1325 aa12.99□□□□□ -0.33
APLF-207ENST00000627740 RGS12O14924 1447 aa12.98□□□□□ -0.33
APLF-207ENST00000627740 CALD1Q05682 793 aaKnown RBP12.98□□□□□ -0.33
APLF-207ENST00000627740 MPRIPQ6WCQ1 1025 aa12.98□□□□□ -0.33
APLF-207ENST00000627740 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
APLF-207ENST00000627740 DOT1LQ8TEK3 1739 aa12.98□□□□□ -0.33
APLF-207ENST00000627740 KDM6AO15550 1401 aaPredicted RBP12.98□□□□□ -0.33
APLF-207ENST00000627740 ITGB4P16144 1822 aa12.97□□□□□ -0.33
APLF-207ENST00000627740 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
APLF-207ENST00000627740 MCM10Q7L590 875 aa12.97□□□□□ -0.33
APLF-207ENST00000627740 MARCH10Q8NA82 808 aaPredicted RBP12.97□□□□□ -0.33
APLF-207ENST00000627740 TOGARAM1Q9Y4F4 1720 aa12.97□□□□□ -0.33
APLF-207ENST00000627740 CEMIPQ8WUJ3 1361 aa12.97□□□□□ -0.33
APLF-207ENST00000627740 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
APLF-207ENST00000627740 DCTN1Q14203 1278 aa12.96□□□□□ -0.33
APLF-207ENST00000627740 KRT27Q7Z3Y8 459 aa12.96□□□□□ -0.33
APLF-207ENST00000627740 WDR63Q8IWG1 891 aa12.96□□□□□ -0.33
APLF-207ENST00000627740 IL17REQ8NFR9 667 aa12.96□□□□□ -0.33
APLF-207ENST00000627740 ZNF521Q96K83 1311 aa12.96□□□□□ -0.34
APLF-207ENST00000627740 MRC1P22897 1456 aa12.96□□□□□ -0.34
APLF-207ENST00000627740 LGR6Q9HBX8 967 aa12.96□□□□□ -0.34
APLF-207ENST00000627740 SBF2Q86WG5 1849 aa12.95□□□□□ -0.34
APLF-207ENST00000627740 BCL9O00512 1426 aa12.95□□□□□ -0.34
APLF-207ENST00000627740 ERVV-2B6SEH9 535 aa12.95□□□□□ -0.34
APLF-207ENST00000627740 TEFQ10587 303 aa12.95□□□□□ -0.34
APLF-207ENST00000627740 IL16Q14005 1332 aa12.95□□□□□ -0.34
APLF-207ENST00000627740 THUMPD2Q9BTF0 503 aaKnown RBP12.94□□□□□ -0.34
APLF-207ENST00000627740 CABP4P57796 275 aa12.93□□□□□ -0.34
APLF-207ENST00000627740 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
APLF-207ENST00000627740 SLC52A2Q9HAB3 445 aa12.93□□□□□ -0.34
APLF-207ENST00000627740 NHSQ6T4R5 1651 aa12.93□□□□□ -0.34
APLF-207ENST00000627740 EP400Q96L91 3159 aa12.93□□□□□ -0.34
APLF-207ENST00000627740 GNAI1P63096 354 aa12.92□□□□□ -0.34
APLF-207ENST00000627740 TAF7Q15545 349 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms