RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 ATRNO75882 1429 aa11.35□□□□□ -0.59
SGMS1-211ENST00000626236 NCAPD2Q15021 1401 aa11.35□□□□□ -0.59
SGMS1-211ENST00000626236 VPS72Q15906 364 aa11.34□□□□□ -0.59
SGMS1-211ENST00000626236 AEBP1Q8IUX7 1158 aa11.34□□□□□ -0.59
SGMS1-211ENST00000626236 CARD10Q9BWT7 1032 aa11.34□□□□□ -0.59
SGMS1-211ENST00000626236 SPATA31A1Q5TZJ5 1347 aa11.34□□□□□ -0.59
SGMS1-211ENST00000626236 SPATA31A5Q5VU36 1347 aa11.34□□□□□ -0.59
SGMS1-211ENST00000626236 SPATA31A7Q8IWB4 1347 aa11.34□□□□□ -0.59
SGMS1-211ENST00000626236 GLI3P10071 1580 aa11.33□□□□□ -0.6
SGMS1-211ENST00000626236 ZNF772Q68DY9 489 aaPredicted RBP11.33□□□□□ -0.6
SGMS1-211ENST00000626236 TRPC5Q9UL62 973 aaPredicted RBP11.33□□□□□ -0.6
SGMS1-211ENST00000626236 ADAMTS8Q9UP79 889 aa11.33□□□□□ -0.6
SGMS1-211ENST00000626236 KDRP35968 1356 aa11.32□□□□□ -0.6
SGMS1-211ENST00000626236 TCP11L2Q8N4U5 519 aa11.32□□□□□ -0.6
SGMS1-211ENST00000626236 QTRT2Q9H974 415 aaKnown RBP11.32□□□□□ -0.6
SGMS1-211ENST00000626236 PKD1L3Q7Z443 1732 aa11.32□□□□□ -0.6
SGMS1-211ENST00000626236 MEGF6O75095 1541 aa11.31□□□□□ -0.6
SGMS1-211ENST00000626236 FCHSD2O94868 740 aa11.31□□□□□ -0.6
SGMS1-211ENST00000626236 PRKAR2BP31323 418 aa11.31□□□□□ -0.6
SGMS1-211ENST00000626236 CCDC146Q8IYE0 955 aa11.31□□□□□ -0.6
SGMS1-211ENST00000626236 RAPGEF4Q8WZA2 1011 aa11.31□□□□□ -0.6
SGMS1-211ENST00000626236 RSPH6AQ9H0K4 717 aa11.31□□□□□ -0.6
SGMS1-211ENST00000626236 THRAP3Q9Y2W1 955 aaKnown RBP11.31□□□□□ -0.6
SGMS1-211ENST00000626236 SHANK3Q9BYB0 1731 aa11.31□□□□□ -0.6
SGMS1-211ENST00000626236 LRRC37A3O60309 1634 aa11.31□□□□□ -0.6
SGMS1-211ENST00000626236 IL2RBP14784 551 aa11.3□□□□□ -0.6
SGMS1-211ENST00000626236 TATP17735 454 aaPredicted RBP11.3□□□□□ -0.6
SGMS1-211ENST00000626236 GJD4Q96KN9 370 aaPredicted RBP11.3□□□□□ -0.6
SGMS1-211ENST00000626236 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
SGMS1-211ENST00000626236 DLG5Q8TDM6 1919 aa11.3□□□□□ -0.6
SGMS1-211ENST00000626236 MAPK8IP3Q9UPT6 1336 aa11.3□□□□□ -0.6
SGMS1-211ENST00000626236 THSD7AQ9UPZ6 1657 aa11.3□□□□□ -0.6
SGMS1-211ENST00000626236 OVOS2A0A0G2JMS6 1433 aa11.29□□□□□ -0.6
SGMS1-211ENST00000626236 DISP2A7MBM2 1401 aa11.29□□□□□ -0.6
SGMS1-211ENST00000626236 FAM98CQ17RN3 349 aaKnown RBP11.29□□□□□ -0.6
SGMS1-211ENST00000626236 RGS17Q9UGC6 210 aaPredicted RBP11.29□□□□□ -0.6
SGMS1-211ENST00000626236 VIRMAQ69YN4 1812 aaKnown RBP11.28□□□□□ -0.6
SGMS1-211ENST00000626236 A0A0G2JS52 829 aa11.28□□□□□ -0.6
SGMS1-211ENST00000626236 NEFMP07197 916 aa11.28□□□□□ -0.6
SGMS1-211ENST00000626236 MYT1Q01538 1121 aa11.28□□□□□ -0.6
SGMS1-211ENST00000626236 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
SGMS1-211ENST00000626236 RUNDC1Q96C34 613 aa11.28□□□□□ -0.6
SGMS1-211ENST00000626236 PLEKHF1Q96S99 279 aa11.28□□□□□ -0.6
SGMS1-211ENST00000626236 BRWD3Q6RI45 1802 aa11.28□□□□□ -0.6
SGMS1-211ENST00000626236 PHACTR3Q96KR7 559 aa11.27□□□□□ -0.61
SGMS1-211ENST00000626236 SENP3-EIF4A1A0A087X0R7 540 aa11.26□□□□□ -0.61
SGMS1-211ENST00000626236 RBM6P78332 1123 aaKnown RBP11.26□□□□□ -0.61
SGMS1-211ENST00000626236 PLEKHO1Q53GL0 409 aaPredicted RBP11.26□□□□□ -0.61
SGMS1-211ENST00000626236 POTEAQ6S8J7 498 aa11.26□□□□□ -0.61
SGMS1-211ENST00000626236 CDCA7Q9BWT1 371 aaPredicted RBP11.26□□□□□ -0.61
SGMS1-211ENST00000626236 PLEKHG2Q9H7P9 1386 aa11.26□□□□□ -0.61
SGMS1-211ENST00000626236 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
SGMS1-211ENST00000626236 RXRBP28702 533 aa11.25□□□□□ -0.61
SGMS1-211ENST00000626236 MTHFSDQ2M296 383 aaKnown RBP11.25□□□□□ -0.61
SGMS1-211ENST00000626236 AMOTQ4VCS5 1084 aa11.25□□□□□ -0.61
SGMS1-211ENST00000626236 ZCRB1Q8TBF4 217 aaKnown RBP11.25□□□□□ -0.61
SGMS1-211ENST00000626236 SPG7Q9UQ90 795 aa11.25□□□□□ -0.61
SGMS1-211ENST00000626236 EXOC5O00471 708 aa11.24□□□□□ -0.61
SGMS1-211ENST00000626236 FKBP8Q14318 412 aa11.24□□□□□ -0.61
SGMS1-211ENST00000626236 DDB1Q16531 1140 aa11.24□□□□□ -0.61
SGMS1-211ENST00000626236 ZNF530Q6P9A1 599 aaPredicted RBP11.24□□□□□ -0.61
SGMS1-211ENST00000626236 GAS2L2Q8NHY3 880 aa11.24□□□□□ -0.61
SGMS1-211ENST00000626236 RRP7AQ9Y3A4 280 aaKnown RBP11.24□□□□□ -0.61
SGMS1-211ENST00000626236 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
SGMS1-211ENST00000626236 APAF1O14727 1248 aa11.23□□□□□ -0.61
SGMS1-211ENST00000626236 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
SGMS1-211ENST00000626236 NEUROD2Q15784 382 aa11.23□□□□□ -0.61
SGMS1-211ENST00000626236 NFE2L2Q16236 605 aa11.23□□□□□ -0.61
SGMS1-211ENST00000626236 SEPT12Q8IYM1 358 aa11.23□□□□□ -0.61
SGMS1-211ENST00000626236 DDX54Q8TDD1 881 aaKnown RBP11.23□□□□□ -0.61
SGMS1-211ENST00000626236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.61
SGMS1-211ENST00000626236 PCDH11XQ9BZA7 1347 aa11.23□□□□□ -0.61
SGMS1-211ENST00000626236 PCDH11YQ9BZA8 1340 aa11.23□□□□□ -0.61
SGMS1-211ENST00000626236 DOT1LQ8TEK3 1739 aa11.23□□□□□ -0.61
SGMS1-211ENST00000626236 SCN11AQ9UI33 1791 aa11.23□□□□□ -0.61
SGMS1-211ENST00000626236 RGS12O14924 1447 aa11.22□□□□□ -0.61
SGMS1-211ENST00000626236 TMPOP42166 694 aaKnown RBP11.22□□□□□ -0.61
SGMS1-211ENST00000626236 C1orf141Q5JVX7 400 aa11.22□□□□□ -0.61
SGMS1-211ENST00000626236 TOGARAM1Q9Y4F4 1720 aa11.22□□□□□ -0.61
SGMS1-211ENST00000626236 MAP3K5Q99683 1374 aa11.21□□□□□ -0.61
SGMS1-211ENST00000626236 CYP27B1O15528 508 aa11.21□□□□□ -0.61
SGMS1-211ENST00000626236 PHKG2P15735 406 aa11.21□□□□□ -0.61
SGMS1-211ENST00000626236 RIPK4P57078 832 aa11.21□□□□□ -0.61
SGMS1-211ENST00000626236 PDE3BQ13370 1112 aa11.21□□□□□ -0.61
SGMS1-211ENST00000626236 AKAP4Q5JQC9 854 aa11.21□□□□□ -0.61
SGMS1-211ENST00000626236 IFNL2Q8IZJ0 200 aa11.21□□□□□ -0.61
SGMS1-211ENST00000626236 RBM42Q9BTD8 480 aaKnown RBP11.21□□□□□ -0.61
SGMS1-211ENST00000626236 SALL2Q9Y467 1007 aaPredicted RBP11.21□□□□□ -0.61
SGMS1-211ENST00000626236 ADAMTS7Q9UKP4 1686 aa11.2□□□□□ -0.62
SGMS1-211ENST00000626236 SPDYE2BA6NHP3 402 aa11.2□□□□□ -0.62
SGMS1-211ENST00000626236 GNAT3A8MTJ3 354 aa11.2□□□□□ -0.62
SGMS1-211ENST00000626236 SPDYE6P0CI01 402 aa11.2□□□□□ -0.62
SGMS1-211ENST00000626236 HNRNPUQ00839 825 aaKnown RBP eCLIP11.2□□□□□ -0.62
SGMS1-211ENST00000626236 SPDYE2Q495Y8 402 aa11.2□□□□□ -0.62
SGMS1-211ENST00000626236 YTHDC1Q96MU7 727 aaKnown RBP11.2□□□□□ -0.62
SGMS1-211ENST00000626236 ITGB4P16144 1822 aa11.2□□□□□ -0.62
SGMS1-211ENST00000626236 MARCH10Q8NA82 808 aaPredicted RBP11.19□□□□□ -0.62
SGMS1-211ENST00000626236 RTF1Q92541 710 aaKnown RBP11.19□□□□□ -0.62
SGMS1-211ENST00000626236 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
SGMS1-211ENST00000626236 SIPA1L3O60292 1781 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms