RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 SPON1Q9HCB6 807 aa14.87□□□□□ -0.03
SSBP4-215ENST00000625926 KNSTRNQ9Y448 316 aa14.86□□□□□ -0.03
SSBP4-215ENST00000625926 CEP350Q5VT06 3117 aa14.86□□□□□ -0.03
SSBP4-215ENST00000625926 WNK3Q9BYP7 1800 aa14.85□□□□□ -0.03
SSBP4-215ENST00000625926 MYOM1P52179 1685 aa14.85□□□□□ -0.03
SSBP4-215ENST00000625926 SENP3-EIF4A1A0A087X0R7 540 aa14.85□□□□□ -0.03
SSBP4-215ENST00000625926 MORC1Q86VD1 984 aa14.85□□□□□ -0.03
SSBP4-215ENST00000625926 EYA1Q99502 592 aa14.85□□□□□ -0.03
SSBP4-215ENST00000625926 PCDH11XQ9BZA7 1347 aa14.85□□□□□ -0.03
SSBP4-215ENST00000625926 PCDH11YQ9BZA8 1340 aa14.85□□□□□ -0.03
SSBP4-215ENST00000625926 NSD2O96028 1365 aa14.85□□□□□ -0.03
SSBP4-215ENST00000625926 RREB1Q92766 1687 aa14.84□□□□□ -0.03
SSBP4-215ENST00000625926 SLC27A3Q5K4L6 730 aa14.84□□□□□ -0.03
SSBP4-215ENST00000625926 KIF7Q2M1P5 1343 aa14.84□□□□□ -0.03
SSBP4-215ENST00000625926 LRRC4BQ9NT99 713 aa14.83□□□□□ -0.04
SSBP4-215ENST00000625926 SPG7Q9UQ90 795 aa14.83□□□□□ -0.04
SSBP4-215ENST00000625926 FAM208AQ9UK61 1670 aaKnown RBP14.82□□□□□ -0.04
SSBP4-215ENST00000625926 CYP27B1O15528 508 aa14.82□□□□□ -0.04
SSBP4-215ENST00000625926 EIF4A2Q14240 407 aaKnown RBP14.82□□□□□ -0.04
SSBP4-215ENST00000625926 PDGFDQ9GZP0 370 aaPredicted RBP14.82□□□□□ -0.04
SSBP4-215ENST00000625926 PPP1R1BQ9UD71 204 aaPredicted RBP14.82□□□□□ -0.04
SSBP4-215ENST00000625926 NUP188Q5SRE5 1749 aa14.82□□□□□ -0.04
SSBP4-215ENST00000625926 ZBTB7AO95365 584 aa14.81□□□□□ -0.04
SSBP4-215ENST00000625926 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.81□□□□□ -0.04
SSBP4-215ENST00000625926 RGPD3A6NKT7 1758 aaPredicted RBP14.8□□□□□ -0.04
SSBP4-215ENST00000625926 RGPD4Q7Z3J3 1758 aa14.8□□□□□ -0.04
SSBP4-215ENST00000625926 NCAPD2Q15021 1401 aa14.79□□□□□ -0.04
SSBP4-215ENST00000625926 NKX1-1Q15270 411 aaPredicted RBP14.79□□□□□ -0.04
SSBP4-215ENST00000625926 ZNF827Q17R98 1081 aa14.79□□□□□ -0.04
SSBP4-215ENST00000625926 AMER1Q5JTC6 1135 aaPredicted RBP14.79□□□□□ -0.04
SSBP4-215ENST00000625926 NHSQ6T4R5 1651 aa14.79□□□□□ -0.04
SSBP4-215ENST00000625926 MPRIPQ6WCQ1 1025 aa14.79□□□□□ -0.04
SSBP4-215ENST00000625926 KIF20BQ96Q89 1820 aa14.79□□□□□ -0.04
SSBP4-215ENST00000625926 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
SSBP4-215ENST00000625926 SBF2Q86WG5 1849 aa14.78□□□□□ -0.04
SSBP4-215ENST00000625926 KCNQ4P56696 695 aa14.78□□□□□ -0.04
SSBP4-215ENST00000625926 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
SSBP4-215ENST00000625926 MTFR1LQ9H019 292 aa14.78□□□□□ -0.04
SSBP4-215ENST00000625926 CCNL1Q9UK58 526 aaPredicted RBP14.78□□□□□ -0.04
SSBP4-215ENST00000625926 PER1O15534 1290 aaPredicted RBP14.77□□□□□ -0.05
SSBP4-215ENST00000625926 HMGB2P26583 209 aaKnown RBP14.77□□□□□ -0.05
SSBP4-215ENST00000625926 IFNL2Q8IZJ0 200 aa14.77□□□□□ -0.05
SSBP4-215ENST00000625926 IGSF1Q8N6C5 1336 aa14.76□□□□□ -0.05
SSBP4-215ENST00000625926 PTGER2P43116 358 aa14.76□□□□□ -0.05
SSBP4-215ENST00000625926 TFCP2L1Q9NZI6 479 aa14.76□□□□□ -0.05
SSBP4-215ENST00000625926 PHKG2P15735 406 aa14.75□□□□□ -0.05
SSBP4-215ENST00000625926 SMARCC1Q92922 1105 aaPredicted RBP14.75□□□□□ -0.05
SSBP4-215ENST00000625926 PLEKHO1Q53GL0 409 aaPredicted RBP14.74□□□□□ -0.05
SSBP4-215ENST00000625926 SLC16A10Q8TF71 515 aa14.74□□□□□ -0.05
SSBP4-215ENST00000625926 PIGBQ92521 554 aa14.74□□□□□ -0.05
SSBP4-215ENST00000625926 PLEKHG2Q9H7P9 1386 aa14.73□□□□□ -0.05
SSBP4-215ENST00000625926 AMOTQ4VCS5 1084 aa14.73□□□□□ -0.05
SSBP4-215ENST00000625926 CC2D1BQ5T0F9 858 aaKnown RBP14.73□□□□□ -0.05
SSBP4-215ENST00000625926 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
SSBP4-215ENST00000625926 PNPLA7Q6ZV29 1317 aa14.72□□□□□ -0.05
SSBP4-215ENST00000625926 DCAF8L1A6NGE4 600 aa14.72□□□□□ -0.05
SSBP4-215ENST00000625926 IL13P35225 146 aa14.72□□□□□ -0.05
SSBP4-215ENST00000625926 MTHFSP49914 203 aa14.72□□□□□ -0.05
SSBP4-215ENST00000625926 SGIP1Q9BQI5 828 aa14.72□□□□□ -0.05
SSBP4-215ENST00000625926 TMOD3Q9NYL9 352 aa14.72□□□□□ -0.05
SSBP4-215ENST00000625926 HSP90AB1P08238 724 aaKnown RBP14.71□□□□□ -0.05
SSBP4-215ENST00000625926 SULT6B1Q6IMI4 303 aa14.71□□□□□ -0.05
SSBP4-215ENST00000625926 UTRNP46939 3433 aa14.7□□□□□ -0.06
SSBP4-215ENST00000625926 AEBP1Q8IUX7 1158 aa14.7□□□□□ -0.06
SSBP4-215ENST00000625926 DCAF5Q96JK2 942 aa14.7□□□□□ -0.06
SSBP4-215ENST00000625926 ARXQ96QS3 562 aa14.7□□□□□ -0.06
SSBP4-215ENST00000625926 BTAF1O14981 1849 aa14.7□□□□□ -0.06
SSBP4-215ENST00000625926 RGPD2P0DJD1 1756 aa14.7□□□□□ -0.06
SSBP4-215ENST00000625926 ERVV-2B6SEH9 535 aa14.69□□□□□ -0.06
SSBP4-215ENST00000625926 POLD1P28340 1107 aa14.69□□□□□ -0.06
SSBP4-215ENST00000625926 ZNF530Q6P9A1 599 aaPredicted RBP14.69□□□□□ -0.06
SSBP4-215ENST00000625926 PAPPAQ13219 1627 aa14.69□□□□□ -0.06
SSBP4-215ENST00000625926 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
SSBP4-215ENST00000625926 MSH5O43196 834 aa14.68□□□□□ -0.06
SSBP4-215ENST00000625926 C1QTNF8P60827 252 aa14.68□□□□□ -0.06
SSBP4-215ENST00000625926 FLAD1Q8NFF5 587 aa14.68□□□□□ -0.06
SSBP4-215ENST00000625926 SYT17Q9BSW7 474 aa14.68□□□□□ -0.06
SSBP4-215ENST00000625926 FHDC1Q9C0D6 1143 aaPredicted RBP14.68□□□□□ -0.06
SSBP4-215ENST00000625926 ASAP1Q9ULH1 1129 aa14.68□□□□□ -0.06
SSBP4-215ENST00000625926 NPC1L1Q9UHC9 1359 aa14.68□□□□□ -0.06
SSBP4-215ENST00000625926 CASZ1Q86V15 1759 aa14.68□□□□□ -0.06
SSBP4-215ENST00000625926 SHANK3Q9BYB0 1731 aa14.67□□□□□ -0.06
SSBP4-215ENST00000625926 LOC102724428A0A0B4J2F2 783 aa14.67□□□□□ -0.06
SSBP4-215ENST00000625926 SIK1P57059 783 aa14.67□□□□□ -0.06
SSBP4-215ENST00000625926 CNGB1Q14028 1251 aaPredicted RBP14.67□□□□□ -0.06
SSBP4-215ENST00000625926 C1orf141Q5JVX7 400 aa14.67□□□□□ -0.06
SSBP4-215ENST00000625926 COL23A1Q86Y22 540 aaPredicted RBP14.67□□□□□ -0.06
SSBP4-215ENST00000625926 ZNF784Q8NCA9 323 aaPredicted RBP14.67□□□□□ -0.06
SSBP4-215ENST00000625926 DOT1LQ8TEK3 1739 aa14.66□□□□□ -0.06
SSBP4-215ENST00000625926 KDRP35968 1356 aa14.66□□□□□ -0.06
SSBP4-215ENST00000625926 DIAPH1O60610 1272 aaKnown RBP14.66□□□□□ -0.06
SSBP4-215ENST00000625926 CABP4P57796 275 aa14.66□□□□□ -0.06
SSBP4-215ENST00000625926 ATG3Q9NT62 314 aa14.66□□□□□ -0.06
SSBP4-215ENST00000625926 ATP6V1AP38606 617 aa14.65□□□□□ -0.06
SSBP4-215ENST00000625926 AK7Q96M32 723 aa14.65□□□□□ -0.06
SSBP4-215ENST00000625926 HMOX1P09601 288 aa14.64□□□□□ -0.07
SSBP4-215ENST00000625926 PKD1L3Q7Z443 1732 aa14.63□□□□□ -0.07
SSBP4-215ENST00000625926 LINC00116Q8NCU8 138 aa14.63□□□□□ -0.07
SSBP4-215ENST00000625926 MAP2P11137 1827 aaKnown RBP14.62□□□□□ -0.07
SSBP4-215ENST00000625926 ITPK1Q13572 414 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms