RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 MYH16Q9H6N6 1097 aa15.37■□□□□ 0.05
LINC00963-220ENST00000625171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.37■□□□□ 0.05
LINC00963-220ENST00000625171 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
LINC00963-220ENST00000625171 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
LINC00963-220ENST00000625171 RRP7AQ9Y3A4 280 aaKnown RBP15.36■□□□□ 0.05
LINC00963-220ENST00000625171 ABCA3Q99758 1704 aa15.35■□□□□ 0.05
LINC00963-220ENST00000625171 ZNF853P0CG23 659 aa15.35■□□□□ 0.05
LINC00963-220ENST00000625171 NEUROD2Q15784 382 aa15.35■□□□□ 0.05
LINC00963-220ENST00000625171 PRDM11Q9NQV5 511 aa15.35■□□□□ 0.05
LINC00963-220ENST00000625171 GLI3P10071 1580 aa15.35■□□□□ 0.05
LINC00963-220ENST00000625171 FAM208AQ9UK61 1670 aaKnown RBP15.35■□□□□ 0.05
LINC00963-220ENST00000625171 MTHFSDQ2M296 383 aaKnown RBP15.34■□□□□ 0.05
LINC00963-220ENST00000625171 LRP5O75197 1615 aa15.33■□□□□ 0.04
LINC00963-220ENST00000625171 FAM83GA6ND36 823 aa15.33■□□□□ 0.04
LINC00963-220ENST00000625171 SF3B2Q13435 895 aaKnown RBP15.33■□□□□ 0.04
LINC00963-220ENST00000625171 ERICH6BQ5W0A0 696 aa15.33■□□□□ 0.04
LINC00963-220ENST00000625171 LTV1Q96GA3 475 aaPredicted RBP15.33■□□□□ 0.04
LINC00963-220ENST00000625171 IFT57Q9NWB7 429 aa15.33■□□□□ 0.04
LINC00963-220ENST00000625171 BABAM1Q9NWV8 329 aa15.33■□□□□ 0.04
LINC00963-220ENST00000625171 WDR17Q8IZU2 1322 aa15.33■□□□□ 0.04
LINC00963-220ENST00000625171 SENP3-EIF4A1A0A087X0R7 540 aa15.32■□□□□ 0.04
LINC00963-220ENST00000625171 HAP1P54257 671 aaPredicted RBP15.32■□□□□ 0.04
LINC00963-220ENST00000625171 GNAI1P63096 354 aa15.32■□□□□ 0.04
LINC00963-220ENST00000625171 PLEKHO1Q53GL0 409 aaPredicted RBP15.32■□□□□ 0.04
LINC00963-220ENST00000625171 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
LINC00963-220ENST00000625171 RCAN3Q9UKA8 241 aa15.32■□□□□ 0.04
LINC00963-220ENST00000625171 ZNF428Q96B54 188 aa15.31■□□□□ 0.04
LINC00963-220ENST00000625171 CARD10Q9BWT7 1032 aa15.31■□□□□ 0.04
LINC00963-220ENST00000625171 SUPT16HQ9Y5B9 1047 aaKnown RBP15.31■□□□□ 0.04
LINC00963-220ENST00000625171 COL5A2P05997 1499 aaPredicted RBP15.31■□□□□ 0.04
LINC00963-220ENST00000625171 GNAT3A8MTJ3 354 aa15.3■□□□□ 0.04
LINC00963-220ENST00000625171 ONECUT3O60422 494 aaPredicted RBP15.3■□□□□ 0.04
LINC00963-220ENST00000625171 CHRNA2Q15822 529 aa15.3■□□□□ 0.04
LINC00963-220ENST00000625171 VPS72Q15906 364 aa15.3■□□□□ 0.04
LINC00963-220ENST00000625171 ZBTB7CA1YPR0 619 aa15.29■□□□□ 0.04
LINC00963-220ENST00000625171 CHL1O00533 1208 aa15.29■□□□□ 0.04
LINC00963-220ENST00000625171 DEFB132Q7Z7B7 95 aa15.29■□□□□ 0.04
LINC00963-220ENST00000625171 SEPT12Q8IYM1 358 aa15.29■□□□□ 0.04
LINC00963-220ENST00000625171 COL14A1Q05707 1796 aaKnown RBP15.29■□□□□ 0.04
LINC00963-220ENST00000625171 CEMIPQ8WUJ3 1361 aa15.28■□□□□ 0.04
LINC00963-220ENST00000625171 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
LINC00963-220ENST00000625171 RTF1Q92541 710 aaKnown RBP15.28■□□□□ 0.04
LINC00963-220ENST00000625171 NLRP2Q9NX02 1062 aa15.28■□□□□ 0.04
LINC00963-220ENST00000625171 RGPD5Q99666 1765 aa15.28■□□□□ 0.04
LINC00963-220ENST00000625171 OVOS2A0A0G2JMS6 1433 aa15.27■□□□□ 0.04
LINC00963-220ENST00000625171 CRB1P82279 1406 aa15.27■□□□□ 0.04
LINC00963-220ENST00000625171 MAP3K5Q99683 1374 aa15.27■□□□□ 0.04
LINC00963-220ENST00000625171 NWD2Q9ULI1 1742 aa15.27■□□□□ 0.04
LINC00963-220ENST00000625171 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
LINC00963-220ENST00000625171 GTF3C3Q9Y5Q9 886 aa15.27■□□□□ 0.04
LINC00963-220ENST00000625171 DLG5Q8TDM6 1919 aa15.27■□□□□ 0.03
LINC00963-220ENST00000625171 FANCIQ9NVI1 1328 aa15.26■□□□□ 0.03
LINC00963-220ENST00000625171 CSB-PGBD3P0DP91 1061 aa15.26■□□□□ 0.03
LINC00963-220ENST00000625171 TATP17735 454 aaPredicted RBP15.26■□□□□ 0.03
LINC00963-220ENST00000625171 USHBP1Q8N6Y0 703 aa15.26■□□□□ 0.03
LINC00963-220ENST00000625171 BRWD3Q6RI45 1802 aa15.26■□□□□ 0.03
LINC00963-220ENST00000625171 KRT27Q7Z3Y8 459 aa15.25■□□□□ 0.03
LINC00963-220ENST00000625171 IL17REQ8NFR9 667 aa15.25■□□□□ 0.03
LINC00963-220ENST00000625171 SPG7Q9UQ90 795 aa15.25■□□□□ 0.03
LINC00963-220ENST00000625171 RGPD2P0DJD1 1756 aa15.24■□□□□ 0.03
LINC00963-220ENST00000625171 SOS1Q07889 1333 aaPredicted RBP15.24■□□□□ 0.03
LINC00963-220ENST00000625171 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
LINC00963-220ENST00000625171 NEFLP07196 543 aa15.24■□□□□ 0.03
LINC00963-220ENST00000625171 BRPF1P55201 1214 aaPredicted RBP15.24■□□□□ 0.03
LINC00963-220ENST00000625171 EVA1CP58658 441 aa15.24■□□□□ 0.03
LINC00963-220ENST00000625171 BAG6P46379 1132 aa15.23■□□□□ 0.03
LINC00963-220ENST00000625171 TOM1L2Q6ZVM7 507 aa15.23■□□□□ 0.03
LINC00963-220ENST00000625171 BTG4Q9NY30 223 aa15.23■□□□□ 0.03
LINC00963-220ENST00000625171 PLCH1Q4KWH8 1693 aa15.22■□□□□ 0.03
LINC00963-220ENST00000625171 RARSP54136 660 aaKnown RBP15.22■□□□□ 0.03
LINC00963-220ENST00000625171 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
LINC00963-220ENST00000625171 TAF7Q15545 349 aaPredicted RBP15.22■□□□□ 0.03
LINC00963-220ENST00000625171 ALDH1L2Q3SY69 923 aa15.22■□□□□ 0.03
LINC00963-220ENST00000625171 MBIPQ9NS73 344 aa15.22■□□□□ 0.03
LINC00963-220ENST00000625171 THRAP3Q9Y2W1 955 aaKnown RBP15.22■□□□□ 0.03
LINC00963-220ENST00000625171 ADAMTS7Q9UKP4 1686 aa15.22■□□□□ 0.03
LINC00963-220ENST00000625171 LRRC37A3O60309 1634 aa15.21■□□□□ 0.03
LINC00963-220ENST00000625171 HSP90AB1P08238 724 aaKnown RBP15.21■□□□□ 0.03
LINC00963-220ENST00000625171 IL2RBP14784 551 aa15.21■□□□□ 0.03
LINC00963-220ENST00000625171 DCTN1Q14203 1278 aa15.21■□□□□ 0.03
LINC00963-220ENST00000625171 NKX1-1Q15270 411 aaPredicted RBP15.21■□□□□ 0.03
LINC00963-220ENST00000625171 C1orf141Q5JVX7 400 aa15.21■□□□□ 0.03
LINC00963-220ENST00000625171 ZNF530Q6P9A1 599 aaPredicted RBP15.21■□□□□ 0.03
LINC00963-220ENST00000625171 LARP1Q6PKG0 1096 aaKnown RBP15.21■□□□□ 0.03
LINC00963-220ENST00000625171 MCM10Q7L590 875 aa15.21■□□□□ 0.03
LINC00963-220ENST00000625171 IFNL2Q8IZJ0 200 aa15.21■□□□□ 0.03
LINC00963-220ENST00000625171 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.21■□□□□ 0.03
LINC00963-220ENST00000625171 CDCA7Q9BWT1 371 aaPredicted RBP15.21■□□□□ 0.03
LINC00963-220ENST00000625171 CCDC9Q9Y3X0 531 aaKnown RBP15.21■□□□□ 0.03
LINC00963-220ENST00000625171 EXOSC9Q06265 439 aaKnown RBP15.2■□□□□ 0.02
LINC00963-220ENST00000625171 THUMPD2Q9BTF0 503 aaKnown RBP15.2■□□□□ 0.02
LINC00963-220ENST00000625171 MEGF6O75095 1541 aa15.2■□□□□ 0.02
LINC00963-220ENST00000625171 RNMTO43148 476 aaKnown RBP15.19■□□□□ 0.02
LINC00963-220ENST00000625171 VAMP4O75379 141 aa15.19■□□□□ 0.02
LINC00963-220ENST00000625171 PHKG2P15735 406 aa15.19■□□□□ 0.02
LINC00963-220ENST00000625171 TSR2Q969E8 191 aaKnown RBP15.19■□□□□ 0.02
LINC00963-220ENST00000625171 DCAF5Q96JK2 942 aa15.19■□□□□ 0.02
LINC00963-220ENST00000625171 PKD1L3Q7Z443 1732 aa15.19■□□□□ 0.02
LINC00963-220ENST00000625171 DISP2A7MBM2 1401 aa15.18■□□□□ 0.02
LINC00963-220ENST00000625171 ZCRB1Q8TBF4 217 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms