RNA–Protein interactions for RNA: ENST00000625063.3

ATRX-219, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-219ENST00000625063 C9orf84Q5VXU9 1444 aa9.51□□□□□ -0.89
ATRX-219ENST00000625063 SKIV2LQ15477 1246 aaKnown RBP9.51□□□□□ -0.89
ATRX-219ENST00000625063 ZNF511Q8NB15 262 aa9.51□□□□□ -0.89
ATRX-219ENST00000625063 MED1Q15648 1581 aaPredicted RBP9.5□□□□□ -0.89
ATRX-219ENST00000625063 CFAP74Q9C0B2 1584 aa9.5□□□□□ -0.89
ATRX-219ENST00000625063 NCOA1Q15788 1441 aa9.5□□□□□ -0.89
ATRX-219ENST00000625063 POTECB2RU33 542 aa9.5□□□□□ -0.89
ATRX-219ENST00000625063 ESF1Q9H501 851 aaKnown RBP9.5□□□□□ -0.89
ATRX-219ENST00000625063 DACH1Q9UI36 760 aa9.5□□□□□ -0.89
ATRX-219ENST00000625063 ATP1B4Q9UN42 357 aaPredicted RBP9.5□□□□□ -0.89
ATRX-219ENST00000625063 SETD1BQ9UPS6 1966 aaKnown RBP9.5□□□□□ -0.89
ATRX-219ENST00000625063 RAPGEF6Q8TEU7 1601 aa9.49□□□□□ -0.89
ATRX-219ENST00000625063 SIAH2O43255 324 aa9.49□□□□□ -0.89
ATRX-219ENST00000625063 ALDH1A1P00352 501 aa9.49□□□□□ -0.89
ATRX-219ENST00000625063 AVPP01185 164 aa9.49□□□□□ -0.89
ATRX-219ENST00000625063 PIP4K2BP78356 416 aa9.49□□□□□ -0.89
ATRX-219ENST00000625063 HELBQ8NG08 1087 aaPredicted RBP9.49□□□□□ -0.89
ATRX-219ENST00000625063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.48□□□□□ -0.89
ATRX-219ENST00000625063 HPS1Q92902 700 aa9.48□□□□□ -0.89
ATRX-219ENST00000625063 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.48□□□□□ -0.89
ATRX-219ENST00000625063 TLL2Q9Y6L7 1015 aa9.48□□□□□ -0.89
ATRX-219ENST00000625063 TRAPPC8Q9Y2L5 1435 aa9.48□□□□□ -0.89
ATRX-219ENST00000625063 NUP153P49790 1475 aaKnown RBP9.47□□□□□ -0.89
ATRX-219ENST00000625063 BRPF1P55201 1214 aaPredicted RBP9.47□□□□□ -0.89
ATRX-219ENST00000625063 CTDSPL2Q05D32 466 aa9.47□□□□□ -0.89
ATRX-219ENST00000625063 FOXJ1Q92949 421 aa9.47□□□□□ -0.89
ATRX-219ENST00000625063 AXIN1O15169 862 aa9.46□□□□□ -0.9
ATRX-219ENST00000625063 RANGAP1P46060 587 aaPredicted RBP9.46□□□□□ -0.9
ATRX-219ENST00000625063 CRIPAKQ8N1N5 446 aa9.46□□□□□ -0.9
ATRX-219ENST00000625063 IL27Q8NEV9 243 aa9.46□□□□□ -0.9
ATRX-219ENST00000625063 TOM1O60784 492 aa9.45□□□□□ -0.9
ATRX-219ENST00000625063 LRRN4Q8WUT4 740 aa9.45□□□□□ -0.9
ATRX-219ENST00000625063 EFCAB2Q5VUJ9 269 aa9.44□□□□□ -0.9
ATRX-219ENST00000625063 AFAP1Q8N556 730 aa9.44□□□□□ -0.9
ATRX-219ENST00000625063 PLCH2O75038 1416 aa9.44□□□□□ -0.9
ATRX-219ENST00000625063 PRXQ9BXM0 1461 aa9.44□□□□□ -0.9
ATRX-219ENST00000625063 CAMSAP1Q5T5Y3 1602 aa9.44□□□□□ -0.9
ATRX-219ENST00000625063 C3P01024 1663 aa9.43□□□□□ -0.9
ATRX-219ENST00000625063 CTC1Q2NKJ3 1217 aa9.43□□□□□ -0.9
ATRX-219ENST00000625063 C4orf48Q5BLP8 95 aa9.43□□□□□ -0.9
ATRX-219ENST00000625063 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
ATRX-219ENST00000625063 PPP2R2DQ66LE6 453 aa9.42□□□□□ -0.9
ATRX-219ENST00000625063 AP1G2O75843 785 aa9.41□□□□□ -0.9
ATRX-219ENST00000625063 VARSP26640 1264 aaKnown RBP9.41□□□□□ -0.9
ATRX-219ENST00000625063 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
ATRX-219ENST00000625063 SAMD9Q5K651 1589 aa9.41□□□□□ -0.9
ATRX-219ENST00000625063 AGERQ15109 404 aa9.4□□□□□ -0.9
ATRX-219ENST00000625063 GMPR2Q9P2T1 348 aaKnown RBP9.4□□□□□ -0.9
ATRX-219ENST00000625063 ZNF518AQ6AHZ1 1483 aa9.4□□□□□ -0.91
ATRX-219ENST00000625063 RFC5P40937 340 aa9.38□□□□□ -0.91
ATRX-219ENST00000625063 ARID5BQ14865 1188 aa9.38□□□□□ -0.91
ATRX-219ENST00000625063 NR6A1Q15406 480 aa9.38□□□□□ -0.91
ATRX-219ENST00000625063 FAM174AQ8TBP5 190 aa9.38□□□□□ -0.91
ATRX-219ENST00000625063 PCMTD1Q96MG8 357 aaPredicted RBP9.38□□□□□ -0.91
ATRX-219ENST00000625063 CNTLNQ9NXG0 1405 aa9.38□□□□□ -0.91
ATRX-219ENST00000625063 DIP2CQ9Y2E4 1556 aa9.37□□□□□ -0.91
ATRX-219ENST00000625063 PRKCSHP14314 528 aaPredicted RBP9.37□□□□□ -0.91
ATRX-219ENST00000625063 HMX1Q9NP08 348 aaPredicted RBP9.37□□□□□ -0.91
ATRX-219ENST00000625063 ATP13A2Q9NQ11 1180 aa9.37□□□□□ -0.91
ATRX-219ENST00000625063 NPATQ14207 1427 aa9.37□□□□□ -0.91
ATRX-219ENST00000625063 ZMYM3Q14202 1370 aa9.37□□□□□ -0.91
ATRX-219ENST00000625063 AGLP35573 1532 aa9.36□□□□□ -0.91
ATRX-219ENST00000625063 MAGEB6P1A0A0J9YX57 407 aa9.36□□□□□ -0.91
ATRX-219ENST00000625063 USP17L8P0C7I0 530 aa9.36□□□□□ -0.91
ATRX-219ENST00000625063 NBPF14Q5TI25 921 aa9.36□□□□□ -0.91
ATRX-219ENST00000625063 SH3BP5LQ7L8J4 393 aa9.36□□□□□ -0.91
ATRX-219ENST00000625063 BPHLQ86WA6 291 aaPredicted RBP9.36□□□□□ -0.91
ATRX-219ENST00000625063 ARMC2Q8NEN0 867 aa9.36□□□□□ -0.91
ATRX-219ENST00000625063 EPS8L1Q8TE68 723 aa9.36□□□□□ -0.91
ATRX-219ENST00000625063 CARD14Q9BXL6 1004 aa9.36□□□□□ -0.91
ATRX-219ENST00000625063 RGS17Q9UGC6 210 aaPredicted RBP9.36□□□□□ -0.91
ATRX-219ENST00000625063 PLA2R1Q13018 1463 aa9.35□□□□□ -0.91
ATRX-219ENST00000625063 NNTQ13423 1086 aa9.35□□□□□ -0.91
ATRX-219ENST00000625063 SH3RF1Q7Z6J0 888 aa9.35□□□□□ -0.91
ATRX-219ENST00000625063 GOPCQ9HD26 462 aa9.35□□□□□ -0.91
ATRX-219ENST00000625063 REREQ9P2R6 1566 aa9.35□□□□□ -0.91
ATRX-219ENST00000625063 CDK13Q14004 1512 aaKnown RBP9.35□□□□□ -0.91
ATRX-219ENST00000625063 TCOF1Q13428 1488 aaKnown RBP9.34□□□□□ -0.91
ATRX-219ENST00000625063 KDM5CP41229 1560 aa9.34□□□□□ -0.91
ATRX-219ENST00000625063 ADH1CP00326 375 aa9.34□□□□□ -0.91
ATRX-219ENST00000625063 BMP1P13497 986 aa9.34□□□□□ -0.91
ATRX-219ENST00000625063 MPNDQ8N594 471 aa9.34□□□□□ -0.91
ATRX-219ENST00000625063 C1QTNF2Q9BXJ5 285 aa9.34□□□□□ -0.91
ATRX-219ENST00000625063 FKBPLQ9UIM3 349 aa9.34□□□□□ -0.91
ATRX-219ENST00000625063 ABCA6Q8N139 1617 aa9.34□□□□□ -0.91
ATRX-219ENST00000625063 MLH3Q9UHC1 1453 aa9.34□□□□□ -0.91
ATRX-219ENST00000625063 PTPRKQ15262 1439 aa9.33□□□□□ -0.92
ATRX-219ENST00000625063 ARHGAP5Q13017 1502 aa9.33□□□□□ -0.92
ATRX-219ENST00000625063 CAPN5O15484 640 aaPredicted RBP9.33□□□□□ -0.92
ATRX-219ENST00000625063 CDK15Q96Q40 435 aa9.33□□□□□ -0.92
ATRX-219ENST00000625063 CPS1P31327 1500 aa9.32□□□□□ -0.92
ATRX-219ENST00000625063 C11orf95C9JLR9 678 aaPredicted RBP9.32□□□□□ -0.92
ATRX-219ENST00000625063 CDK11AQ9UQ88 783 aaPredicted RBP9.32□□□□□ -0.92
ATRX-219ENST00000625063 SHANK2Q9UPX8 1470 aa9.32□□□□□ -0.92
ATRX-219ENST00000625063 MYO5CQ9NQX4 1742 aa9.31□□□□□ -0.92
ATRX-219ENST00000625063 NR3C2P08235 984 aa9.31□□□□□ -0.92
ATRX-219ENST00000625063 SNRPBP14678 240 aaKnown RBP9.31□□□□□ -0.92
ATRX-219ENST00000625063 GRM5P41594 1212 aa9.31□□□□□ -0.92
ATRX-219ENST00000625063 POTEAQ6S8J7 498 aa9.31□□□□□ -0.92
ATRX-219ENST00000625063 TREML4Q6UXN2 200 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms