RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ZMYND15Q9H091 742 aa6.44□□□□□ -1.38
CDKL5-208ENST00000624953 SOBPA7XYQ1 873 aa6.43□□□□□ -1.38
CDKL5-208ENST00000624953 SPINT1O43278 529 aa6.43□□□□□ -1.38
CDKL5-208ENST00000624953 MAP7D1Q3KQU3 841 aa6.43□□□□□ -1.38
CDKL5-208ENST00000624953 LINC00528Q8N1L1 170 aa6.43□□□□□ -1.38
CDKL5-208ENST00000624953 CDCA7Q9BWT1 371 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-208ENST00000624953 NXF1Q9UBU9 619 aaKnown RBP6.43□□□□□ -1.38
CDKL5-208ENST00000624953 HRH3Q9Y5N1 445 aa6.43□□□□□ -1.38
CDKL5-208ENST00000624953 ERBB4Q15303 1308 aa6.43□□□□□ -1.38
CDKL5-208ENST00000624953 SEMA3FQ13275 785 aa6.42□□□□□ -1.38
CDKL5-208ENST00000624953 CC2D2BQ6DHV5 1058 aa6.42□□□□□ -1.38
CDKL5-208ENST00000624953 PLEKHM2Q8IWE5 1019 aa6.42□□□□□ -1.38
CDKL5-208ENST00000624953 WWC1Q8IX03 1113 aa6.42□□□□□ -1.38
CDKL5-208ENST00000624953 ZFP42Q96MM3 310 aa6.42□□□□□ -1.38
CDKL5-208ENST00000624953 SOS2Q07890 1332 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-208ENST00000624953 ZCCHC6Q5VYS8 1495 aaKnown RBP6.41□□□□□ -1.38
CDKL5-208ENST00000624953 HDGFL1Q5TGJ6 251 aa6.41□□□□□ -1.38
CDKL5-208ENST00000624953 GLMNQ92990 594 aa6.41□□□□□ -1.38
CDKL5-208ENST00000624953 TSEN34Q9BSV6 310 aaKnown RBP6.41□□□□□ -1.38
CDKL5-208ENST00000624953 PCDHB11Q9Y5F2 797 aa6.41□□□□□ -1.38
CDKL5-208ENST00000624953 LZTS3O60299 673 aaPredicted RBP6.4□□□□□ -1.38
CDKL5-208ENST00000624953 RNF135Q8IUD6 432 aa6.4□□□□□ -1.38
CDKL5-208ENST00000624953 PLPP7Q8NBV4 271 aa6.4□□□□□ -1.38
CDKL5-208ENST00000624953 SLC16A10Q8TF71 515 aa6.4□□□□□ -1.38
CDKL5-208ENST00000624953 DCAF1Q9Y4B6 1507 aa6.4□□□□□ -1.39
CDKL5-208ENST00000624953 WASLO00401 505 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-208ENST00000624953 DKK1O94907 266 aa6.39□□□□□ -1.39
CDKL5-208ENST00000624953 PTGIRP43119 386 aa6.39□□□□□ -1.39
CDKL5-208ENST00000624953 SLFNL1Q499Z3 407 aa6.39□□□□□ -1.39
CDKL5-208ENST00000624953 TRIM52Q96A61 297 aa6.39□□□□□ -1.39
CDKL5-208ENST00000624953 CYLDQ9NQC7 956 aa6.39□□□□□ -1.39
CDKL5-208ENST00000624953 H3BM21 787 aa6.38□□□□□ -1.39
CDKL5-208ENST00000624953 ATP9BO43861 1147 aa6.38□□□□□ -1.39
CDKL5-208ENST00000624953 TBC1D9Q6ZT07 1266 aa6.38□□□□□ -1.39
CDKL5-208ENST00000624953 DOLKQ9UPQ8 538 aa6.38□□□□□ -1.39
CDKL5-208ENST00000624953 PCDHGA11Q9Y5H2 935 aa6.38□□□□□ -1.39
CDKL5-208ENST00000624953 GPC1P35052 558 aa6.37□□□□□ -1.39
CDKL5-208ENST00000624953 RNF144AP50876 292 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-208ENST00000624953 SCNN1DP51172 638 aa6.37□□□□□ -1.39
CDKL5-208ENST00000624953 RAB15P59190 212 aa6.37□□□□□ -1.39
CDKL5-208ENST00000624953 SRPK2P78362 688 aaKnown RBP6.37□□□□□ -1.39
CDKL5-208ENST00000624953 CLN3Q13286 438 aa6.37□□□□□ -1.39
CDKL5-208ENST00000624953 FOXD4L5Q5VV16 416 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-208ENST00000624953 ZNF295-AS1Q8N0V1 137 aa6.37□□□□□ -1.39
CDKL5-208ENST00000624953 ZSCAN1Q8NBB4 408 aa6.37□□□□□ -1.39
CDKL5-208ENST00000624953 AGBL1Q96MI9 1066 aa6.37□□□□□ -1.39
CDKL5-208ENST00000624953 PURBQ96QR8 312 aaKnown RBP6.37□□□□□ -1.39
CDKL5-208ENST00000624953 USP17L5A8MUK1 530 aa6.36□□□□□ -1.39
CDKL5-208ENST00000624953 GNRH1P01148 92 aa6.36□□□□□ -1.39
CDKL5-208ENST00000624953 CFAP70Q5T0N1 1121 aa6.36□□□□□ -1.39
CDKL5-208ENST00000624953 CYP2U1Q7Z449 544 aa6.36□□□□□ -1.39
CDKL5-208ENST00000624953 RNF217Q8TC41 542 aa6.36□□□□□ -1.39
CDKL5-208ENST00000624953 IRF7Q92985 503 aa6.36□□□□□ -1.39
CDKL5-208ENST00000624953 XAGE2Q96GT9 111 aa6.36□□□□□ -1.39
CDKL5-208ENST00000624953 PPP1R12CQ9BZL4 782 aa6.36□□□□□ -1.39
CDKL5-208ENST00000624953 FHDC1Q9C0D6 1143 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-208ENST00000624953 DNMT3LQ9UJW3 386 aa6.36□□□□□ -1.39
CDKL5-208ENST00000624953 MAFBQ9Y5Q3 323 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-208ENST00000624953 ATP5J2-PTCD1G3V325 749 aa6.35□□□□□ -1.39
CDKL5-208ENST00000624953 IL2RAP01589 272 aa6.35□□□□□ -1.39
CDKL5-208ENST00000624953 CTSOP43234 321 aaPredicted RBP6.35□□□□□ -1.39
CDKL5-208ENST00000624953 USP4Q13107 963 aa6.35□□□□□ -1.39
CDKL5-208ENST00000624953 NCOA4Q13772 614 aa6.35□□□□□ -1.39
CDKL5-208ENST00000624953 C1orf115Q9H7X2 142 aa6.35□□□□□ -1.39
CDKL5-208ENST00000624953 A0A1W2PRU2 124 aa6.34□□□□□ -1.39
CDKL5-208ENST00000624953 USP17L3A6NCW0 530 aa6.34□□□□□ -1.39
CDKL5-208ENST00000624953 USP17L4A6NCW7 530 aa6.34□□□□□ -1.39
CDKL5-208ENST00000624953 PALM3A6NDB9 673 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-208ENST00000624953 TMEM229AB2RXF0 380 aa6.34□□□□□ -1.39
CDKL5-208ENST00000624953 ZBTB7BO15156 539 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-208ENST00000624953 BMP2P12643 396 aa6.34□□□□□ -1.39
CDKL5-208ENST00000624953 SKIP12755 728 aa6.34□□□□□ -1.39
CDKL5-208ENST00000624953 RELBQ01201 579 aa6.34□□□□□ -1.39
CDKL5-208ENST00000624953 SCARF1Q14162 830 aa6.34□□□□□ -1.39
CDKL5-208ENST00000624953 KANK4Q5T7N3 995 aaPredicted RBP6.34□□□□□ -1.39
CDKL5-208ENST00000624953 USP17L2Q6R6M4 530 aa6.34□□□□□ -1.39
CDKL5-208ENST00000624953 USP17L1Q7RTZ2 530 aa6.34□□□□□ -1.39
CDKL5-208ENST00000624953 GRIP2Q9C0E4 1043 aa6.34□□□□□ -1.39
CDKL5-208ENST00000624953 SPATA31C2B4DYI2 1134 aa6.33□□□□□ -1.4
CDKL5-208ENST00000624953 NPAS3Q8IXF0 933 aa6.33□□□□□ -1.4
CDKL5-208ENST00000624953 SIRT1Q96EB6 747 aa6.33□□□□□ -1.4
CDKL5-208ENST00000624953 SLC4A9Q96Q91 983 aa6.33□□□□□ -1.4
CDKL5-208ENST00000624953 INSM2Q96T92 566 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-208ENST00000624953 ESYT1Q9BSJ8 1104 aa6.33□□□□□ -1.4
CDKL5-208ENST00000624953 ETNK1Q9HBU6 452 aa6.33□□□□□ -1.4
CDKL5-208ENST00000624953 ZNF777Q9ULD5 760 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-208ENST00000624953 SENP3-EIF4A1A0A087X0R7 540 aa6.32□□□□□ -1.4
CDKL5-208ENST00000624953 TTLL8A6PVC2 850 aa6.32□□□□□ -1.4
CDKL5-208ENST00000624953 MYCP01106 439 aaPredicted RBP6.32□□□□□ -1.4
CDKL5-208ENST00000624953 EPHA4P54764 986 aa6.32□□□□□ -1.4
CDKL5-208ENST00000624953 MTFR1Q15390 333 aa6.32□□□□□ -1.4
CDKL5-208ENST00000624953 TFIP11Q9UBB9 837 aaKnown RBP6.32□□□□□ -1.4
CDKL5-208ENST00000624953 SLC35F4A4IF30 521 aa6.31□□□□□ -1.4
CDKL5-208ENST00000624953 UPP2O95045 317 aa6.31□□□□□ -1.4
CDKL5-208ENST00000624953 CLDN10P78369 228 aa6.31□□□□□ -1.4
CDKL5-208ENST00000624953 EML3Q32P44 896 aa6.31□□□□□ -1.4
CDKL5-208ENST00000624953 OXLD1Q5BKU9 147 aa6.31□□□□□ -1.4
CDKL5-208ENST00000624953 C6orf118Q5T5N4 469 aa6.31□□□□□ -1.4
CDKL5-208ENST00000624953 POTEAQ6S8J7 498 aa6.31□□□□□ -1.4
CDKL5-208ENST00000624953 SIX5Q8N196 739 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms