RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 LRRC4BQ9NT99 713 aa25.3■■□□□ 1.64
PCDHB5-202ENST00000623915 ZNF827Q17R98 1081 aa25.29■■□□□ 1.64
PCDHB5-202ENST00000623915 MTFR1LQ9H019 292 aa25.29■■□□□ 1.64
PCDHB5-202ENST00000623915 WASHC2AQ641Q2 1341 aa25.29■■□□□ 1.64
PCDHB5-202ENST00000623915 KIF24Q5T7B8 1368 aa25.29■■□□□ 1.64
PCDHB5-202ENST00000623915 KAT6BQ8WYB5 2073 aa25.28■■□□□ 1.64
PCDHB5-202ENST00000623915 PANK3Q9H999 370 aa25.28■■□□□ 1.64
PCDHB5-202ENST00000623915 DOT1LQ8TEK3 1739 aa25.28■■□□□ 1.64
PCDHB5-202ENST00000623915 MEGF6O75095 1541 aa25.27■■□□□ 1.64
PCDHB5-202ENST00000623915 RTL1A6NKG5 1358 aa25.26■■□□□ 1.63
PCDHB5-202ENST00000623915 DDX54Q8TDD1 881 aaKnown RBP25.25■■□□□ 1.63
PCDHB5-202ENST00000623915 FHDC1Q9C0D6 1143 aaPredicted RBP25.25■■□□□ 1.63
PCDHB5-202ENST00000623915 QSER1Q2KHR3 1735 aa25.25■■□□□ 1.63
PCDHB5-202ENST00000623915 DCAF8L1A6NGE4 600 aa25.23■■□□□ 1.63
PCDHB5-202ENST00000623915 PER1O15534 1290 aaPredicted RBP25.23■■□□□ 1.63
PCDHB5-202ENST00000623915 AMPHP49418 695 aa25.23■■□□□ 1.63
PCDHB5-202ENST00000623915 SYT17Q9BSW7 474 aa25.23■■□□□ 1.63
PCDHB5-202ENST00000623915 GGNBP2Q9H3C7 697 aa25.23■■□□□ 1.63
PCDHB5-202ENST00000623915 NPC1L1Q9UHC9 1359 aa25.22■■□□□ 1.63
PCDHB5-202ENST00000623915 TUBGCP6Q96RT7 1819 aa25.22■■□□□ 1.63
PCDHB5-202ENST00000623915 AKT1S1Q96B36 256 aa25.22■■□□□ 1.63
PCDHB5-202ENST00000623915 LY75O60449 1722 aa25.22■■□□□ 1.63
PCDHB5-202ENST00000623915 RRS1Q15050 365 aaKnown RBP25.21■■□□□ 1.63
PCDHB5-202ENST00000623915 POLR3GLQ9BT43 218 aa25.21■■□□□ 1.63
PCDHB5-202ENST00000623915 MAP2P11137 1827 aaKnown RBP25.21■■□□□ 1.63
PCDHB5-202ENST00000623915 COL24A1Q17RW2 1714 aa25.2■■□□□ 1.63
PCDHB5-202ENST00000623915 SLC27A3Q5K4L6 730 aa25.19■■□□□ 1.62
PCDHB5-202ENST00000623915 MAP3K5Q99683 1374 aa25.18■■□□□ 1.62
PCDHB5-202ENST00000623915 PRIM1P49642 420 aaKnown RBP25.18■■□□□ 1.62
PCDHB5-202ENST00000623915 NBPF6Q5VWK0 638 aa25.18■■□□□ 1.62
PCDHB5-202ENST00000623915 NBPF4Q96M43 638 aa25.18■■□□□ 1.62
PCDHB5-202ENST00000623915 AMER1Q5JTC6 1135 aaPredicted RBP25.17■■□□□ 1.62
PCDHB5-202ENST00000623915 ZCRB1Q8TBF4 217 aaKnown RBP25.17■■□□□ 1.62
PCDHB5-202ENST00000623915 ARXQ96QS3 562 aa25.17■■□□□ 1.62
PCDHB5-202ENST00000623915 KNSTRNQ9Y448 316 aa25.17■■□□□ 1.62
PCDHB5-202ENST00000623915 KCNQ4P56696 695 aa25.16■■□□□ 1.62
PCDHB5-202ENST00000623915 PNPLA7Q6ZV29 1317 aa25.15■■□□□ 1.62
PCDHB5-202ENST00000623915 SYTL4Q96C24 671 aaPredicted RBP25.15■■□□□ 1.62
PCDHB5-202ENST00000623915 SMG6Q86US8 1419 aaKnown RBP25.14■■□□□ 1.62
PCDHB5-202ENST00000623915 USHBP1Q8N6Y0 703 aa25.14■■□□□ 1.62
PCDHB5-202ENST00000623915 INSRP06213 1382 aa25.13■■□□□ 1.61
PCDHB5-202ENST00000623915 FLT4P35916 1363 aa25.13■■□□□ 1.61
PCDHB5-202ENST00000623915 GOLGB1Q14789 3259 aaKnown RBP25.11■■□□□ 1.61
PCDHB5-202ENST00000623915 HSP90AB2PQ58FF8 381 aa25.11■■□□□ 1.61
PCDHB5-202ENST00000623915 SLC16A10Q8TF71 515 aa25.11■■□□□ 1.61
PCDHB5-202ENST00000623915 CHD4Q14839 1912 aa25.08■■□□□ 1.6
PCDHB5-202ENST00000623915 TOGARAM1Q9Y4F4 1720 aa25.07■■□□□ 1.6
PCDHB5-202ENST00000623915 RAPGEF4Q8WZA2 1011 aa25.07■■□□□ 1.6
PCDHB5-202ENST00000623915 TFCP2L1Q9NZI6 479 aa25.07■■□□□ 1.6
PCDHB5-202ENST00000623915 NCAPD2Q15021 1401 aa25.06■■□□□ 1.6
PCDHB5-202ENST00000623915 POLKQ9UBT6 870 aa25.06■■□□□ 1.6
PCDHB5-202ENST00000623915 CCNL1Q9UK58 526 aaPredicted RBP25.06■■□□□ 1.6
PCDHB5-202ENST00000623915 PKD1L3Q7Z443 1732 aa25.06■■□□□ 1.6
PCDHB5-202ENST00000623915 ZNF784Q8NCA9 323 aaPredicted RBP25.05■■□□□ 1.6
PCDHB5-202ENST00000623915 C5P01031 1676 aa25.04■■□□□ 1.6
PCDHB5-202ENST00000623915 TATP17735 454 aaPredicted RBP25.04■■□□□ 1.6
PCDHB5-202ENST00000623915 EMILIN1Q9Y6C2 1016 aa25.04■■□□□ 1.6
PCDHB5-202ENST00000623915 PCDH11XQ9BZA7 1347 aa25.04■■□□□ 1.6
PCDHB5-202ENST00000623915 PCDH11YQ9BZA8 1340 aa25.04■■□□□ 1.6
PCDHB5-202ENST00000623915 POLD1P28340 1107 aa25.02■■□□□ 1.6
PCDHB5-202ENST00000623915 MORC1Q86VD1 984 aa25.02■■□□□ 1.6
PCDHB5-202ENST00000623915 TAF1LQ8IZX4 1826 aa25.01■■□□□ 1.59
PCDHB5-202ENST00000623915 CYP27B1O15528 508 aa25.01■■□□□ 1.59
PCDHB5-202ENST00000623915 PLEKHG2Q9H7P9 1386 aa25.01■■□□□ 1.59
PCDHB5-202ENST00000623915 ITGB4P16144 1822 aa25■■□□□ 1.59
PCDHB5-202ENST00000623915 COL23A1Q86Y22 540 aaPredicted RBP24.99■■□□□ 1.59
PCDHB5-202ENST00000623915 PALLDQ8WX93 1383 aa24.98■■□□□ 1.59
PCDHB5-202ENST00000623915 KLHL34Q8N239 644 aa24.97■■□□□ 1.59
PCDHB5-202ENST00000623915 NLGN2Q8NFZ4 835 aa24.97■■□□□ 1.59
PCDHB5-202ENST00000623915 GPR162Q16538 588 aa24.94■■□□□ 1.58
PCDHB5-202ENST00000623915 MPRIPQ6WCQ1 1025 aa24.94■■□□□ 1.58
PCDHB5-202ENST00000623915 C4BP0C0L5 1744 aa24.94■■□□□ 1.58
PCDHB5-202ENST00000623915 NKX1-1Q15270 411 aaPredicted RBP24.91■■□□□ 1.58
PCDHB5-202ENST00000623915 MSL1Q68DK7 614 aa24.91■■□□□ 1.58
PCDHB5-202ENST00000623915 UBR3Q6ZT12 1888 aa24.9■■□□□ 1.58
PCDHB5-202ENST00000623915 PPM1GO15355 546 aaPredicted RBP24.9■■□□□ 1.58
PCDHB5-202ENST00000623915 MSH5O43196 834 aa24.9■■□□□ 1.58
PCDHB5-202ENST00000623915 AMIGO3Q86WK7 504 aa24.9■■□□□ 1.58
PCDHB5-202ENST00000623915 EYA1Q99502 592 aa24.9■■□□□ 1.58
PCDHB5-202ENST00000623915 TNNT2P45379 298 aaPredicted RBP24.89■■□□□ 1.58
PCDHB5-202ENST00000623915 CC2D1BQ5T0F9 858 aaKnown RBP24.89■■□□□ 1.58
PCDHB5-202ENST00000623915 PIGBQ92521 554 aa24.89■■□□□ 1.58
PCDHB5-202ENST00000623915 YBX3P16989 372 aaKnown RBP eCLIP24.87■■□□□ 1.57
PCDHB5-202ENST00000623915 EIF4A2Q14240 407 aaKnown RBP24.87■■□□□ 1.57
PCDHB5-202ENST00000623915 PELP1Q8IZL8 1130 aaKnown RBP24.87■■□□□ 1.57
PCDHB5-202ENST00000623915 SMARCC1Q92922 1105 aaPredicted RBP24.87■■□□□ 1.57
PCDHB5-202ENST00000623915 IGSF1Q8N6C5 1336 aa24.86■■□□□ 1.57
PCDHB5-202ENST00000623915 FLAD1Q8NFF5 587 aa24.85■■□□□ 1.57
PCDHB5-202ENST00000623915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.85■■□□□ 1.57
PCDHB5-202ENST00000623915 SPG7Q9UQ90 795 aa24.85■■□□□ 1.57
PCDHB5-202ENST00000623915 COL3A1P02461 1466 aaPredicted RBP24.84■■□□□ 1.57
PCDHB5-202ENST00000623915 MTHFSP49914 203 aa24.84■■□□□ 1.57
PCDHB5-202ENST00000623915 KDRP35968 1356 aa24.83■■□□□ 1.57
PCDHB5-202ENST00000623915 HMGB2P26583 209 aaKnown RBP24.82■■□□□ 1.56
PCDHB5-202ENST00000623915 SMIM5Q71RC9 77 aa24.82■■□□□ 1.56
PCDHB5-202ENST00000623915 PHKG2P15735 406 aa24.81■■□□□ 1.56
PCDHB5-202ENST00000623915 IL13P35225 146 aa24.81■■□□□ 1.56
PCDHB5-202ENST00000623915 LINC00116Q8NCU8 138 aa24.81■■□□□ 1.56
PCDHB5-202ENST00000623915 AK7Q96M32 723 aa24.81■■□□□ 1.56
PCDHB5-202ENST00000623915 LOC102724428A0A0B4J2F2 783 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms