RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 SAFB2Q14151 953 aaKnown RBP eCLIP4.07□□□□□ -1.76
ATRX-212ENST00000623706 MTERF4Q7Z6M4 381 aaKnown RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 CCDC63Q8NA47 563 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 MSANTD4Q8NCY6 345 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 V9GYY5 206 aaPredicted RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 FOXD4L6Q3SYB3 417 aaPredicted RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 SPTY2D1Q68D10 685 aaPredicted RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 FOXD4L3Q6VB84 417 aaPredicted RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 GBP6Q6ZN66 633 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 KRT74Q7RTS7 529 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 RALYLQ86SE5 291 aaKnown RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 PHLDB2Q86SQ0 1253 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 TXLNBQ8N3L3 684 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 C6orf203Q9P0P8 240 aaPredicted RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 PHF8Q9UPP1 1060 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 GOLGA6BA6NDN3 693 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 ERC2O15083 957 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 ATP2C2O75185 946 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 C1orf94Q6P1W5 598 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 BAG1Q99933 345 aaPredicted RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 MLPHQ9BV36 600 aaPredicted RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 NUCKS1Q9H1E3 243 aaKnown RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 KDM4AO75164 1064 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 ESRRBO95718 433 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 IKQ13123 557 aaPredicted RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 SPC24Q8NBT2 197 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 PSMC4P43686 418 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 CCDC157Q569K6 752 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 CCDC178Q5BJE1 867 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 RNF214Q8ND24 703 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 CCDC68Q9H2F9 335 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 SYTL2Q9HCH5 934 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 DYNC1I1O14576 645 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 NEBLO76041 1014 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 FBLN2P98095 1184 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 CCDC83Q8IWF9 413 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 CCDC102AQ96A19 550 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 NAP1L4Q99733 375 aaKnown RBP4.07□□□□□ -1.76
ATRX-212ENST00000623706 LRRCC1Q9C099 1032 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 RAI14Q9P0K7 980 aa4.07□□□□□ -1.76
ATRX-212ENST00000623706 DNAJC3Q13217 504 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 CCDC110Q8TBZ0 833 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 PPP1R14BQ96C90 147 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 SPATA17Q96L03 361 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 ANKRD18BA2A2Z9 1011 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 CNGA1P29973 690 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 DEUP1Q05D60 604 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 PLS1Q14651 629 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 GLE1Q53GS7 698 aaKnown RBP4.06□□□□□ -1.76
ATRX-212ENST00000623706 HSP90AB4PQ58FF6 505 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 FKBP15Q5T1M5 1219 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 IFFO2Q5TF58 517 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 SMARCC2Q8TAQ2 1214 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 IQCDQ96DY2 449 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 PALMDQ9NP74 551 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 MGEA5O60502 916 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 REC8O95072 547 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 IVLP07476 585 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 ERCC5P28715 1186 aaPredicted RBP4.06□□□□□ -1.76
ATRX-212ENST00000623706 MAATS1Q7Z4T9 603 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 MSL3Q8N5Y2 521 aaKnown RBP4.06□□□□□ -1.76
ATRX-212ENST00000623706 TRIML2Q8N7C3 387 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 HNRNPCL2B2RXH8 293 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 HNRNPCL1O60812 293 aaKnown RBP4.06□□□□□ -1.76
ATRX-212ENST00000623706 TRIM21P19474 475 aaKnown RBP4.06□□□□□ -1.76
ATRX-212ENST00000623706 SLC4A10Q6U841 1118 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 FAM180AQ6UWF9 173 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 AFAP1Q8N556 730 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 VCX3BQ9H321 246 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 RHOBTB1O94844 696 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 SSBP05455 408 aaKnown RBP eCLIP4.06□□□□□ -1.76
ATRX-212ENST00000623706 ANGPT1Q15389 498 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 FSCBQ5H9T9 825 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 FBF1Q8TES7 1133 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 DDX21Q9NR30 783 aaKnown RBP eCLIP4.06□□□□□ -1.76
ATRX-212ENST00000623706 IQCA1LA6NCM1 817 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 DESP17661 470 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 INPP1P49441 399 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 RRS1Q15050 365 aaKnown RBP4.06□□□□□ -1.76
ATRX-212ENST00000623706 WHAMMP3Q1A5X7 153 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 ARMC9Q7Z3E5 817 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 DSEQ9UL01 958 aa4.06□□□□□ -1.76
ATRX-212ENST00000623706 PPP1R12AO14974 1030 aaPredicted RBP4.05□□□□□ -1.76
ATRX-212ENST00000623706 KIF5CO60282 957 aa4.05□□□□□ -1.76
ATRX-212ENST00000623706 UTP14CQ5TAP6 766 aaKnown RBP4.05□□□□□ -1.76
ATRX-212ENST00000623706 NUDCD3Q8IVD9 361 aa4.05□□□□□ -1.76
ATRX-212ENST00000623706 ARL10Q8N8L6 244 aa4.05□□□□□ -1.76
ATRX-212ENST00000623706 CHMP4CQ96CF2 233 aa4.05□□□□□ -1.76
ATRX-212ENST00000623706 SPDL1Q96EA4 605 aa4.05□□□□□ -1.76
ATRX-212ENST00000623706 ZSCAN31Q96LW9 406 aaPredicted RBP4.05□□□□□ -1.76
ATRX-212ENST00000623706 CTAGE5O15320 804 aa4.05□□□□□ -1.76
ATRX-212ENST00000623706 RNF40O75150 1001 aa4.05□□□□□ -1.76
ATRX-212ENST00000623706 SMIM24O75264 130 aa4.05□□□□□ -1.76
ATRX-212ENST00000623706 MAP2K2P36507 400 aa4.05□□□□□ -1.76
ATRX-212ENST00000623706 ARHGAP18Q8N392 663 aa4.05□□□□□ -1.76
ATRX-212ENST00000623706 CDC40O60508 579 aaKnown RBP eCLIP4.05□□□□□ -1.76
ATRX-212ENST00000623706 LONP1P36776 959 aaKnown RBP4.05□□□□□ -1.76
ATRX-212ENST00000623706 PRPHP41219 470 aa4.05□□□□□ -1.76
ATRX-212ENST00000623706 PIP4K2AP48426 406 aaPredicted RBP4.05□□□□□ -1.76
ATRX-212ENST00000623706 CCDC38Q502W7 563 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms