RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 KAT6BQ8WYB5 2073 aa22.07■■□□□ 1.12
DDB2-216ENST00000622878 ZCRB1Q8TBF4 217 aaKnown RBP22.06■■□□□ 1.12
DDB2-216ENST00000622878 POLKQ9UBT6 870 aa22.06■■□□□ 1.12
DDB2-216ENST00000622878 NCAPD2Q15021 1401 aa22.06■■□□□ 1.12
DDB2-216ENST00000622878 WASHC2AQ641Q2 1341 aa22.06■■□□□ 1.12
DDB2-216ENST00000622878 TXNRD1Q16881 649 aa22.05■■□□□ 1.12
DDB2-216ENST00000622878 ANO8Q9HCE9 1232 aaPredicted RBP22.05■■□□□ 1.12
DDB2-216ENST00000622878 DOT1LQ8TEK3 1739 aa22.03■■□□□ 1.12
DDB2-216ENST00000622878 NSD2O96028 1365 aa22.01■■□□□ 1.11
DDB2-216ENST00000622878 RAPGEF4Q8WZA2 1011 aa22.01■■□□□ 1.11
DDB2-216ENST00000622878 CASZ1Q86V15 1759 aa22.01■■□□□ 1.11
DDB2-216ENST00000622878 KIF7Q2M1P5 1343 aa22.01■■□□□ 1.11
DDB2-216ENST00000622878 PAPPAQ13219 1627 aa22■■□□□ 1.11
DDB2-216ENST00000622878 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
DDB2-216ENST00000622878 TATP17735 454 aaPredicted RBP21.99■■□□□ 1.11
DDB2-216ENST00000622878 PKD1L3Q7Z443 1732 aa21.99■■□□□ 1.11
DDB2-216ENST00000622878 TNNT2P45379 298 aaPredicted RBP21.97■■□□□ 1.11
DDB2-216ENST00000622878 PRIM1P49642 420 aaKnown RBP21.97■■□□□ 1.11
DDB2-216ENST00000622878 EYA1Q99502 592 aa21.97■■□□□ 1.11
DDB2-216ENST00000622878 SLC15A2Q16348 729 aa21.95■■□□□ 1.1
DDB2-216ENST00000622878 PDGFDQ9GZP0 370 aaPredicted RBP21.95■■□□□ 1.1
DDB2-216ENST00000622878 LRRC4BQ9NT99 713 aa21.95■■□□□ 1.1
DDB2-216ENST00000622878 LY75O60449 1722 aa21.94■■□□□ 1.1
DDB2-216ENST00000622878 CYP27B1O15528 508 aa21.94■■□□□ 1.1
DDB2-216ENST00000622878 EIF4A2Q14240 407 aaKnown RBP21.94■■□□□ 1.1
DDB2-216ENST00000622878 PCDH11XQ9BZA7 1347 aa21.94■■□□□ 1.1
DDB2-216ENST00000622878 PCDH11YQ9BZA8 1340 aa21.94■■□□□ 1.1
DDB2-216ENST00000622878 AMER1Q5JTC6 1135 aaPredicted RBP21.93■■□□□ 1.1
DDB2-216ENST00000622878 STK32BQ9NY57 414 aa21.93■■□□□ 1.1
DDB2-216ENST00000622878 KNSTRNQ9Y448 316 aa21.93■■□□□ 1.1
DDB2-216ENST00000622878 SYTL4Q96C24 671 aaPredicted RBP21.92■■□□□ 1.1
DDB2-216ENST00000622878 TOGARAM1Q9Y4F4 1720 aa21.92■■□□□ 1.1
DDB2-216ENST00000622878 PER1O15534 1290 aaPredicted RBP21.91■■□□□ 1.1
DDB2-216ENST00000622878 SLC27A3Q5K4L6 730 aa21.91■■□□□ 1.1
DDB2-216ENST00000622878 MORC1Q86VD1 984 aa21.91■■□□□ 1.1
DDB2-216ENST00000622878 SPON1Q9HCB6 807 aa21.91■■□□□ 1.1
DDB2-216ENST00000622878 IGSF1Q8N6C5 1336 aa21.89■■□□□ 1.1
DDB2-216ENST00000622878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.89■■□□□ 1.093e-7■□□□□ 10.1
DDB2-216ENST00000622878 ITGB4P16144 1822 aa21.88■■□□□ 1.09
DDB2-216ENST00000622878 NKX1-1Q15270 411 aaPredicted RBP21.88■■□□□ 1.09
DDB2-216ENST00000622878 ZNF827Q17R98 1081 aa21.88■■□□□ 1.09
DDB2-216ENST00000622878 PLEKHG2Q9H7P9 1386 aa21.87■■□□□ 1.09
DDB2-216ENST00000622878 QSER1Q2KHR3 1735 aa21.87■■□□□ 1.09
DDB2-216ENST00000622878 AKT1S1Q96B36 256 aa21.87■■□□□ 1.09
DDB2-216ENST00000622878 SPG7Q9UQ90 795 aa21.86■■□□□ 1.09
DDB2-216ENST00000622878 ZBTB7AO95365 584 aa21.84■■□□□ 1.09
DDB2-216ENST00000622878 KCNQ4P56696 695 aa21.84■■□□□ 1.09
DDB2-216ENST00000622878 TUBGCP6Q96RT7 1819 aa21.83■■□□□ 1.09
DDB2-216ENST00000622878 PTGER2P43116 358 aa21.83■■□□□ 1.09
DDB2-216ENST00000622878 PHKG2P15735 406 aa21.81■■□□□ 1.08
DDB2-216ENST00000622878 MPRIPQ6WCQ1 1025 aa21.81■■□□□ 1.08
DDB2-216ENST00000622878 NPC1L1Q9UHC9 1359 aa21.8■■□□□ 1.08
DDB2-216ENST00000622878 IL13P35225 146 aa21.8■■□□□ 1.08
DDB2-216ENST00000622878 IFNL2Q8IZJ0 200 aa21.8■■□□□ 1.08
DDB2-216ENST00000622878 SGIP1Q9BQI5 828 aa21.8■■□□□ 1.08
DDB2-216ENST00000622878 MTFR1LQ9H019 292 aa21.8■■□□□ 1.08
DDB2-216ENST00000622878 CCNL1Q9UK58 526 aaPredicted RBP21.8■■□□□ 1.08
DDB2-216ENST00000622878 ATF5Q9Y2D1 282 aaPredicted RBP21.8■■□□□ 1.08
DDB2-216ENST00000622878 TAF1LQ8IZX4 1826 aa21.79■■□□□ 1.08
DDB2-216ENST00000622878 PIGBQ92521 554 aa21.79■■□□□ 1.08
DDB2-216ENST00000622878 C5P01031 1676 aa21.79■■□□□ 1.08
DDB2-216ENST00000622878 KDRP35968 1356 aa21.78■■□□□ 1.08
DDB2-216ENST00000622878 PALLDQ8WX93 1383 aa21.78■■□□□ 1.08
DDB2-216ENST00000622878 AEBP1Q8IUX7 1158 aa21.78■■□□□ 1.08
DDB2-216ENST00000622878 PPP1R1BQ9UD71 204 aaPredicted RBP21.78■■□□□ 1.08
DDB2-216ENST00000622878 PNPLA7Q6ZV29 1317 aa21.78■■□□□ 1.08
DDB2-216ENST00000622878 COL24A1Q17RW2 1714 aa21.77■■□□□ 1.08
DDB2-216ENST00000622878 MTHFSP49914 203 aa21.76■■□□□ 1.07
DDB2-216ENST00000622878 CC2D1BQ5T0F9 858 aaKnown RBP21.76■■□□□ 1.07
DDB2-216ENST00000622878 UTRNP46939 3433 aa21.75■■□□□ 1.07
DDB2-216ENST00000622878 PLEKHO1Q53GL0 409 aaPredicted RBP21.74■■□□□ 1.07
DDB2-216ENST00000622878 SULT6B1Q6IMI4 303 aa21.74■■□□□ 1.07
DDB2-216ENST00000622878 SLC16A10Q8TF71 515 aa21.74■■□□□ 1.07
DDB2-216ENST00000622878 SMARCC1Q92922 1105 aaPredicted RBP21.74■■□□□ 1.07
DDB2-216ENST00000622878 TFCP2L1Q9NZI6 479 aa21.74■■□□□ 1.07
DDB2-216ENST00000622878 AMOTQ4VCS5 1084 aa21.73■■□□□ 1.07
DDB2-216ENST00000622878 TMOD3Q9NYL9 352 aa21.72■■□□□ 1.07
DDB2-216ENST00000622878 KDM6AO15550 1401 aaPredicted RBP21.71■■□□□ 1.07
DDB2-216ENST00000622878 C4BP0C0L5 1744 aa21.7■■□□□ 1.06
DDB2-216ENST00000622878 ERVV-2B6SEH9 535 aa21.7■■□□□ 1.06
DDB2-216ENST00000622878 ZNF530Q6P9A1 599 aaPredicted RBP21.7■■□□□ 1.06
DDB2-216ENST00000622878 DCAF5Q96JK2 942 aa21.7■■□□□ 1.06
DDB2-216ENST00000622878 ASAP1Q9ULH1 1129 aa21.7■■□□□ 1.06
DDB2-216ENST00000622878 COL3A1P02461 1466 aaPredicted RBP21.7■■□□□ 1.06
DDB2-216ENST00000622878 HSP90AB1P08238 724 aaKnown RBP21.69■■□□□ 1.06
DDB2-216ENST00000622878 HMGB2P26583 209 aaKnown RBP21.68■■□□□ 1.06
DDB2-216ENST00000622878 COL23A1Q86Y22 540 aaPredicted RBP21.68■■□□□ 1.06
DDB2-216ENST00000622878 ATG3Q9NT62 314 aa21.68■■□□□ 1.06
DDB2-216ENST00000622878 LOC102724428A0A0B4J2F2 783 aa21.67■■□□□ 1.06
DDB2-216ENST00000622878 SIK1P57059 783 aa21.67■■□□□ 1.06
DDB2-216ENST00000622878 ARXQ96QS3 562 aa21.67■■□□□ 1.06
DDB2-216ENST00000622878 FHDC1Q9C0D6 1143 aaPredicted RBP21.67■■□□□ 1.06
DDB2-216ENST00000622878 UBR3Q6ZT12 1888 aa21.66■■□□□ 1.06
DDB2-216ENST00000622878 GOLGB1Q14789 3259 aaKnown RBP21.66■■□□□ 1.06
DDB2-216ENST00000622878 DIAPH1O60610 1272 aaKnown RBP21.66■■□□□ 1.06
DDB2-216ENST00000622878 SYT17Q9BSW7 474 aa21.66■■□□□ 1.06
DDB2-216ENST00000622878 ZNF831Q5JPB2 1677 aa21.66■■□□□ 1.06
DDB2-216ENST00000622878 MAP3K5Q99683 1374 aa21.65■■□□□ 1.06
DDB2-216ENST00000622878 SCN11AQ9UI33 1791 aa21.65■■□□□ 1.06
DDB2-216ENST00000622878 ITPK1Q13572 414 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 239.7 ms