RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
PCDHGA11-203ENST00000622044 RPAP2Q8IXW5 612 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA11-203ENST00000622044 UNC13BO14795 1591 aa13.79□□□□□ -0.2
PCDHGA11-203ENST00000622044 NSD2O96028 1365 aa13.79□□□□□ -0.2
PCDHGA11-203ENST00000622044 HCLS1P14317 486 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA11-203ENST00000622044 TXNDC2Q86VQ3 553 aa13.79□□□□□ -0.2
PCDHGA11-203ENST00000622044 NAP1L2Q9ULW6 460 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA11-203ENST00000622044 NOL7Q9UMY1 257 aaKnown RBP13.79□□□□□ -0.2
PCDHGA11-203ENST00000622044 CLTCL1P53675 1640 aa13.78□□□□□ -0.2
PCDHGA11-203ENST00000622044 EIF2S2P20042 333 aaKnown RBP13.78□□□□□ -0.2
PCDHGA11-203ENST00000622044 DCTPP1Q9H773 170 aa13.78□□□□□ -0.2
PCDHGA11-203ENST00000622044 NCKAP5LQ9HCH0 1330 aa13.78□□□□□ -0.2
PCDHGA11-203ENST00000622044 SASS6Q6UVJ0 657 aa13.78□□□□□ -0.2
PCDHGA11-203ENST00000622044 NUTM1Q86Y26 1132 aa13.78□□□□□ -0.2
PCDHGA11-203ENST00000622044 ZNF592Q92610 1267 aa13.78□□□□□ -0.2
PCDHGA11-203ENST00000622044 SMC3Q9UQE7 1217 aa13.78□□□□□ -0.2
PCDHGA11-203ENST00000622044 ZNF445P59923 1031 aa13.78□□□□□ -0.2
PCDHGA11-203ENST00000622044 TRPM2O94759 1503 aa13.77□□□□□ -0.2
PCDHGA11-203ENST00000622044 LRRCC1Q9C099 1032 aa13.77□□□□□ -0.21
PCDHGA11-203ENST00000622044 SHROOM2Q13796 1616 aa13.77□□□□□ -0.21
PCDHGA11-203ENST00000622044 CEP85Q6P2H3 762 aa13.76□□□□□ -0.21
PCDHGA11-203ENST00000622044 ANKRD44Q8N8A2 993 aa13.76□□□□□ -0.21
PCDHGA11-203ENST00000622044 ARHGAP45Q92619 1136 aa13.76□□□□□ -0.21
PCDHGA11-203ENST00000622044 JARID2Q92833 1246 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA11-203ENST00000622044 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
PCDHGA11-203ENST00000622044 CEBPAP49715 358 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA11-203ENST00000622044 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHGA11-203ENST00000622044 RPGRIP1LQ68CZ1 1315 aa13.76□□□□□ -0.21
PCDHGA11-203ENST00000622044 LAMC1P11047 1609 aa13.76□□□□□ -0.21
PCDHGA11-203ENST00000622044 GNAI2P04899 355 aa13.76□□□□□ -0.21
PCDHGA11-203ENST00000622044 FGD1P98174 961 aa13.76□□□□□ -0.21
PCDHGA11-203ENST00000622044 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
PCDHGA11-203ENST00000622044 RTEL1-TNFRSF6BF6WH68 1400 aa13.75□□□□□ -0.21
PCDHGA11-203ENST00000622044 GADD45BO75293 160 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA11-203ENST00000622044 AMPHP49418 695 aa13.75□□□□□ -0.21
PCDHGA11-203ENST00000622044 FERMT3Q86UX7 667 aa13.75□□□□□ -0.21
PCDHGA11-203ENST00000622044 ADCY5O95622 1261 aa13.75□□□□□ -0.21
PCDHGA11-203ENST00000622044 MX1P20591 662 aa13.75□□□□□ -0.21
PCDHGA11-203ENST00000622044 PDE1AP54750 535 aa13.75□□□□□ -0.21
PCDHGA11-203ENST00000622044 IGSF3O75054 1194 aa13.74□□□□□ -0.21
PCDHGA11-203ENST00000622044 FBXW7Q969H0 707 aa13.74□□□□□ -0.21
PCDHGA11-203ENST00000622044 AK9Q5TCS8 1911 aa13.74□□□□□ -0.21
PCDHGA11-203ENST00000622044 DDIT3P35638 169 aa13.74□□□□□ -0.21
PCDHGA11-203ENST00000622044 NUTM2GQ5VZR2 741 aa13.74□□□□□ -0.21
PCDHGA11-203ENST00000622044 USP48Q86UV5 1035 aa13.74□□□□□ -0.21
PCDHGA11-203ENST00000622044 FOSBP53539 338 aa13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 CWC27Q6UX04 472 aaKnown RBP13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 DIAPH3Q9NSV4 1193 aa13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 CNPY2Q9Y2B0 182 aa13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 WDR33Q9C0J8 1336 aaKnown RBP13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 CAMK4Q16566 473 aa13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 GIMAP6Q6P9H5 292 aa13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 UHRF1BP1LA0JNW5 1464 aa13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 MCM2P49736 904 aa13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 MSH6P52701 1360 aa13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
PCDHGA11-203ENST00000622044 PALD1Q9ULE6 856 aa13.72□□□□□ -0.21
PCDHGA11-203ENST00000622044 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
PCDHGA11-203ENST00000622044 DYNC1I1O14576 645 aa13.72□□□□□ -0.21
PCDHGA11-203ENST00000622044 UBTFL1P0CB47 393 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA11-203ENST00000622044 MTERF4Q7Z6M4 381 aaKnown RBP13.72□□□□□ -0.21
PCDHGA11-203ENST00000622044 ABCC1P33527 1531 aa13.72□□□□□ -0.21
PCDHGA11-203ENST00000622044 GOLGA6L6A8MZA4 724 aa13.72□□□□□ -0.21
PCDHGA11-203ENST00000622044 G2E3Q7L622 706 aa13.71□□□□□ -0.21
PCDHGA11-203ENST00000622044 SPG7Q9UQ90 795 aa13.71□□□□□ -0.21
PCDHGA11-203ENST00000622044 CPA1P15085 419 aa13.71□□□□□ -0.21
PCDHGA11-203ENST00000622044 CCDC83Q8IWF9 413 aa13.71□□□□□ -0.21
PCDHGA11-203ENST00000622044 KIF3AQ9Y496 699 aa13.71□□□□□ -0.21
PCDHGA11-203ENST00000622044 ATP7AQ04656 1500 aa13.71□□□□□ -0.21
PCDHGA11-203ENST00000622044 IQGAP1P46940 1657 aa13.71□□□□□ -0.22
PCDHGA11-203ENST00000622044 ATP6V1DQ9Y5K8 247 aa13.71□□□□□ -0.22
PCDHGA11-203ENST00000622044 ABCC4O15439 1325 aa13.7□□□□□ -0.22
PCDHGA11-203ENST00000622044 FOXO3O43524 673 aa13.7□□□□□ -0.22
PCDHGA11-203ENST00000622044 ESYT1Q9BSJ8 1104 aa13.7□□□□□ -0.22
PCDHGA11-203ENST00000622044 LRRFIP2Q9Y608 721 aaKnown RBP13.7□□□□□ -0.22
PCDHGA11-203ENST00000622044 IQSEC2Q5JU85 1478 aa13.7□□□□□ -0.22
PCDHGA11-203ENST00000622044 NOLC1Q14978 699 aaKnown RBP eCLIP13.7□□□□□ -0.22
PCDHGA11-203ENST00000622044 PPP4R3BQ5MIZ7 849 aa13.7□□□□□ -0.22
PCDHGA11-203ENST00000622044 PLXNC1O60486 1568 aa13.7□□□□□ -0.22
PCDHGA11-203ENST00000622044 ZNF771Q7L3S4 317 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA11-203ENST00000622044 HMGN5P82970 282 aaKnown RBP13.69□□□□□ -0.22
PCDHGA11-203ENST00000622044 HS1BP3Q53T59 392 aa13.69□□□□□ -0.22
PCDHGA11-203ENST00000622044 NPHP1O15259 732 aa13.69□□□□□ -0.22
PCDHGA11-203ENST00000622044 BICD2Q8TD16 824 aa13.69□□□□□ -0.22
PCDHGA11-203ENST00000622044 ZDHHC9Q9Y397 364 aa13.69□□□□□ -0.22
PCDHGA11-203ENST00000622044 RNF17Q9BXT8 1623 aaKnown RBP13.69□□□□□ -0.22
PCDHGA11-203ENST00000622044 CASTP20810 708 aaKnown RBP13.69□□□□□ -0.22
PCDHGA11-203ENST00000622044 STK3Q13188 491 aa13.69□□□□□ -0.22
PCDHGA11-203ENST00000622044 HSP90AB2PQ58FF8 381 aa13.69□□□□□ -0.22
PCDHGA11-203ENST00000622044 NGDNQ8NEJ9 315 aaKnown RBP13.69□□□□□ -0.22
PCDHGA11-203ENST00000622044 ABCA6Q8N139 1617 aa13.69□□□□□ -0.22
PCDHGA11-203ENST00000622044 GNAI3P08754 354 aa13.68□□□□□ -0.22
PCDHGA11-203ENST00000622044 CEBPZQ03701 1054 aaKnown RBP13.68□□□□□ -0.22
PCDHGA11-203ENST00000622044 NUDT16Q96DE0 195 aaKnown RBP13.68□□□□□ -0.22
PCDHGA11-203ENST00000622044 TRIM5Q9C035 493 aa13.68□□□□□ -0.22
PCDHGA11-203ENST00000622044 ZNF500O60304 480 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA11-203ENST00000622044 CCT4P50991 539 aaKnown RBP13.68□□□□□ -0.22
PCDHGA11-203ENST00000622044 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
PCDHGA11-203ENST00000622044 HSP90B1P14625 803 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms