RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 TIGD1Q96MW7 591 aa6.34□□□□□ -1.39
MATR3-228ENST00000620916 GABPB1Q06547 395 aaPredicted RBP6.34□□□□□ -1.39
MATR3-228ENST00000620916 ARHGEF1Q92888 912 aaKnown RBP6.34□□□□□ -1.39
MATR3-228ENST00000620916 SIRT1Q96EB6 747 aa6.34□□□□□ -1.39
MATR3-228ENST00000620916 LARP6Q9BRS8 491 aaKnown RBP6.34□□□□□ -1.39
MATR3-228ENST00000620916 PDE4AP27815 886 aa6.34□□□□□ -1.4
MATR3-228ENST00000620916 HS1BP3Q53T59 392 aa6.34□□□□□ -1.4
MATR3-228ENST00000620916 CREBRFQ8IUR6 639 aa6.34□□□□□ -1.4
MATR3-228ENST00000620916 ITFG2Q969R8 447 aa6.34□□□□□ -1.4
MATR3-228ENST00000620916 FAM210AQ96ND0 272 aa6.34□□□□□ -1.4
MATR3-228ENST00000620916 CABP2Q9NPB3 220 aa6.34□□□□□ -1.4
MATR3-228ENST00000620916 SMC4Q9NTJ3 1288 aa6.34□□□□□ -1.4
MATR3-228ENST00000620916 PPP1R15AO75807 674 aaPredicted RBP6.33□□□□□ -1.4
MATR3-228ENST00000620916 PROSER2Q86WR7 435 aaPredicted RBP6.33□□□□□ -1.4
MATR3-228ENST00000620916 AEBP1Q8IUX7 1158 aa6.33□□□□□ -1.4
MATR3-228ENST00000620916 DONSONQ9NYP3 566 aa6.33□□□□□ -1.4
MATR3-228ENST00000620916 ZRANB1Q9UGI0 708 aa6.33□□□□□ -1.4
MATR3-228ENST00000620916 SETD5Q9C0A6 1442 aa6.33□□□□□ -1.4
MATR3-228ENST00000620916 RBM6P78332 1123 aaKnown RBP6.33□□□□□ -1.4
MATR3-228ENST00000620916 CT47A1Q5JQC4 288 aaPredicted RBP6.33□□□□□ -1.4
MATR3-228ENST00000620916 POTEHQ6S545 545 aa6.33□□□□□ -1.4
MATR3-228ENST00000620916 RNF217Q8TC41 542 aa6.33□□□□□ -1.4
MATR3-228ENST00000620916 TMC1Q8TDI8 760 aa6.33□□□□□ -1.4
MATR3-228ENST00000620916 NGLY1Q96IV0 654 aa6.33□□□□□ -1.4
MATR3-228ENST00000620916 ERBINQ96RT1 1412 aa6.33□□□□□ -1.4
MATR3-228ENST00000620916 LRP5O75197 1615 aa6.33□□□□□ -1.4
MATR3-228ENST00000620916 LOC102724159A0A0B4J2E5 919 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 ARID4AP29374 1257 aaPredicted RBP6.32□□□□□ -1.4
MATR3-228ENST00000620916 LTKP29376 864 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 PWP2Q15269 919 aaKnown RBP6.32□□□□□ -1.4
MATR3-228ENST00000620916 MEX3CQ5U5Q3 659 aaKnown RBP6.32□□□□□ -1.4
MATR3-228ENST00000620916 RINLQ6ZS11 566 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 REM2Q8IYK8 340 aaPredicted RBP6.32□□□□□ -1.4
MATR3-228ENST00000620916 TRIM52Q96A61 297 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 HFM1A2PYH4 1435 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 LRP6O75581 1613 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 KCNJ4P48050 445 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 CDCA8Q53HL2 280 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 EXOC8Q8IYI6 725 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 MYH16Q9H6N6 1097 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 CALCOCO1Q9P1Z2 691 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 CHD2O14647 1828 aaKnown RBP6.32□□□□□ -1.4
MATR3-228ENST00000620916 MKRN3Q13064 507 aaKnown RBP6.32□□□□□ -1.4
MATR3-228ENST00000620916 ZSCAN30Q86W11 494 aa6.32□□□□□ -1.4
MATR3-228ENST00000620916 PLEKHG1Q9ULL1 1385 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 ADGRB3O60242 1522 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 UQCRHLA0A096LP55 91 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 ZBTB7CA1YPR0 619 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 KIF3CO14782 793 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 UQCRHP07919 91 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 CSPP1Q1MSJ5 1256 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 MNS1Q8NEH6 495 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 POGKQ9P215 609 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 SETBP1Q9Y6X0 1596 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 CAPN2P17655 700 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 PDAP1Q13442 181 aaKnown RBP6.31□□□□□ -1.4
MATR3-228ENST00000620916 FBXO22Q8NEZ5 403 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 TSPAN18Q96SJ8 248 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 MED4Q9NPJ6 270 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 FEZ2Q9UHY8 353 aaPredicted RBP6.31□□□□□ -1.4
MATR3-228ENST00000620916 TBX22Q9Y458 520 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 INSRP06213 1382 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 KANK1Q14678 1352 aa6.31□□□□□ -1.4
MATR3-228ENST00000620916 RPRD2Q5VT52 1461 aaKnown RBP6.31□□□□□ -1.4
MATR3-228ENST00000620916 CALRP27797 417 aaKnown RBP6.3□□□□□ -1.4
MATR3-228ENST00000620916 HDAC1Q13547 482 aaPredicted RBP6.3□□□□□ -1.4
MATR3-228ENST00000620916 BORCS6Q96GS4 357 aa6.3□□□□□ -1.4
MATR3-228ENST00000620916 KDM4CQ9H3R0 1056 aa6.3□□□□□ -1.4
MATR3-228ENST00000620916 TRIM6-TRIM34B2RNG4 842 aa6.3□□□□□ -1.4
MATR3-228ENST00000620916 PITPNM1O00562 1244 aa6.3□□□□□ -1.4
MATR3-228ENST00000620916 SASS6Q6UVJ0 657 aa6.3□□□□□ -1.4
MATR3-228ENST00000620916 IFNL1Q8IU54 200 aa6.3□□□□□ -1.4
MATR3-228ENST00000620916 SGSM3Q96HU1 749 aa6.3□□□□□ -1.4
MATR3-228ENST00000620916 PPP1R9BQ96SB3 815 aa6.3□□□□□ -1.4
MATR3-228ENST00000620916 TRIM34Q9BYJ4 488 aa6.3□□□□□ -1.4
MATR3-228ENST00000620916 NBPF3Q9H094 633 aa6.3□□□□□ -1.4
MATR3-228ENST00000620916 GTF2F1P35269 517 aaKnown RBP eCLIP6.3□□□□□ -1.4
MATR3-228ENST00000620916 NOP2P46087 812 aaKnown RBP6.3□□□□□ -1.4
MATR3-228ENST00000620916 SWT1Q5T5J6 900 aaKnown RBP6.3□□□□□ -1.4
MATR3-228ENST00000620916 FAM117AQ9C073 453 aa6.3□□□□□ -1.4
MATR3-228ENST00000620916 DHX57Q6P158 1386 aaKnown RBP6.3□□□□□ -1.4
MATR3-228ENST00000620916 IBTKQ9P2D0 1353 aaPredicted RBP6.29□□□□□ -1.4
MATR3-228ENST00000620916 KLHL33A6NCF5 533 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 ANP32CO43423 234 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 C11orf91Q3C1V1 193 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 CHMP4CQ96CF2 233 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 C19orf44Q9H6X5 657 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 MRVI1Q9Y6F6 885 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 NHSL1Q5SYE7 1610 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 NOS1P29475 1434 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 PTCH1Q13635 1447 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 MYOM3Q5VTT5 1437 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 SMG6Q86US8 1419 aaKnown RBP6.29□□□□□ -1.4
MATR3-228ENST00000620916 ZNF853P0CG23 659 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 FAM177A1Q8N128 213 aaPredicted RBP6.29□□□□□ -1.4
MATR3-228ENST00000620916 RGS12O14924 1447 aa6.29□□□□□ -1.4
MATR3-228ENST00000620916 MCM5P33992 734 aa6.28□□□□□ -1.4
MATR3-228ENST00000620916 FEZ1Q99689 392 aa6.28□□□□□ -1.4
MATR3-228ENST00000620916 NEFHP12036 1026 aa6.28□□□□□ -1.4
MATR3-228ENST00000620916 GUCY2CP25092 1073 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms