RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 MTFR1LQ9H019 292 aa15.56■□□□□ 0.08
TARDBP-221ENST00000619555 CLSPNQ9HAW4 1339 aa15.56■□□□□ 0.08
TARDBP-221ENST00000619555 RTL1A6NKG5 1358 aa15.56■□□□□ 0.08
TARDBP-221ENST00000619555 PAPPAQ13219 1627 aa15.56■□□□□ 0.08
TARDBP-221ENST00000619555 MYOM1P52179 1685 aa15.56■□□□□ 0.08
TARDBP-221ENST00000619555 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
TARDBP-221ENST00000619555 YY1P25490 414 aa15.55■□□□□ 0.08
TARDBP-221ENST00000619555 KCNQ4P56696 695 aa15.55■□□□□ 0.08
TARDBP-221ENST00000619555 SHANK3Q9BYB0 1731 aa15.54■□□□□ 0.08
TARDBP-221ENST00000619555 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
TARDBP-221ENST00000619555 SGIP1Q9BQI5 828 aa15.54■□□□□ 0.08
TARDBP-221ENST00000619555 KIF20BQ96Q89 1820 aa15.54■□□□□ 0.08
TARDBP-221ENST00000619555 SLC27A3Q5K4L6 730 aa15.53■□□□□ 0.08
TARDBP-221ENST00000619555 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
TARDBP-221ENST00000619555 FHDC1Q9C0D6 1143 aaPredicted RBP15.53■□□□□ 0.08
TARDBP-221ENST00000619555 TIMELESSQ9UNS1 1208 aa15.53■□□□□ 0.08
TARDBP-221ENST00000619555 NSD2O96028 1365 aa15.52■□□□□ 0.08
TARDBP-221ENST00000619555 DOT1LQ8TEK3 1739 aa15.52■□□□□ 0.08
TARDBP-221ENST00000619555 RAPGEF4Q8WZA2 1011 aa15.52■□□□□ 0.08
TARDBP-221ENST00000619555 SYT17Q9BSW7 474 aa15.52■□□□□ 0.08
TARDBP-221ENST00000619555 NSD3Q9BZ95 1437 aa15.51■□□□□ 0.07
TARDBP-221ENST00000619555 INSRP06213 1382 aa15.51■□□□□ 0.07
TARDBP-221ENST00000619555 EMILIN1Q9Y6C2 1016 aa15.51■□□□□ 0.07
TARDBP-221ENST00000619555 SMG6Q86US8 1419 aaKnown RBP15.51■□□□□ 0.07
TARDBP-221ENST00000619555 FLT4P35916 1363 aa15.5■□□□□ 0.07
TARDBP-221ENST00000619555 CGNL1Q0VF96 1302 aa15.5■□□□□ 0.07
TARDBP-221ENST00000619555 TATP17735 454 aaPredicted RBP15.5■□□□□ 0.07
TARDBP-221ENST00000619555 ARXQ96QS3 562 aa15.5■□□□□ 0.07
TARDBP-221ENST00000619555 UTRNP46939 3433 aa15.5■□□□□ 0.07
TARDBP-221ENST00000619555 PNPLA7Q6ZV29 1317 aa15.48■□□□□ 0.07
TARDBP-221ENST00000619555 PPM1GO15355 546 aaPredicted RBP15.48■□□□□ 0.07
TARDBP-221ENST00000619555 POLR3GLQ9BT43 218 aa15.48■□□□□ 0.07
TARDBP-221ENST00000619555 TFCP2L1Q9NZI6 479 aa15.48■□□□□ 0.07
TARDBP-221ENST00000619555 CCNL1Q9UK58 526 aaPredicted RBP15.48■□□□□ 0.07
TARDBP-221ENST00000619555 LY75O60449 1722 aa15.48■□□□□ 0.07
TARDBP-221ENST00000619555 KIF24Q5T7B8 1368 aa15.48■□□□□ 0.07
TARDBP-221ENST00000619555 TUBGCP6Q96RT7 1819 aa15.46■□□□□ 0.07
TARDBP-221ENST00000619555 CYP27B1O15528 508 aa15.46■□□□□ 0.07
TARDBP-221ENST00000619555 SLC16A10Q8TF71 515 aa15.46■□□□□ 0.07
TARDBP-221ENST00000619555 QSER1Q2KHR3 1735 aa15.46■□□□□ 0.06
TARDBP-221ENST00000619555 PCDH11XQ9BZA7 1347 aa15.45■□□□□ 0.06
TARDBP-221ENST00000619555 PCDH11YQ9BZA8 1340 aa15.45■□□□□ 0.06
TARDBP-221ENST00000619555 MAP2P11137 1827 aaKnown RBP15.45■□□□□ 0.06
TARDBP-221ENST00000619555 MPRIPQ6WCQ1 1025 aa15.44■□□□□ 0.06
TARDBP-221ENST00000619555 WASHC2AQ641Q2 1341 aa15.43■□□□□ 0.06
TARDBP-221ENST00000619555 POLD1P28340 1107 aa15.43■□□□□ 0.06
TARDBP-221ENST00000619555 KLHL34Q8N239 644 aa15.43■□□□□ 0.06
TARDBP-221ENST00000619555 EYA1Q99502 592 aa15.43■□□□□ 0.06
TARDBP-221ENST00000619555 POLKQ9UBT6 870 aa15.43■□□□□ 0.06
TARDBP-221ENST00000619555 MAP3K5Q99683 1374 aa15.42■□□□□ 0.06
TARDBP-221ENST00000619555 HSPA5P11021 654 aaKnown RBP15.42■□□□□ 0.06
TARDBP-221ENST00000619555 TNNT2P45379 298 aaPredicted RBP15.42■□□□□ 0.06
TARDBP-221ENST00000619555 COL23A1Q86Y22 540 aaPredicted RBP15.42■□□□□ 0.06
TARDBP-221ENST00000619555 NCAPD2Q15021 1401 aa15.41■□□□□ 0.06
TARDBP-221ENST00000619555 COL24A1Q17RW2 1714 aa15.4■□□□□ 0.06
TARDBP-221ENST00000619555 ANKRD26Q9UPS8 1709 aa15.4■□□□□ 0.06
TARDBP-221ENST00000619555 PALLDQ8WX93 1383 aa15.4■□□□□ 0.06
TARDBP-221ENST00000619555 EIF4G2P78344 907 aaKnown RBP eCLIP15.4■□□□□ 0.068e-11■■□□□ 12.1
TARDBP-221ENST00000619555 ITGB4P16144 1822 aa15.4■□□□□ 0.06
TARDBP-221ENST00000619555 TOGARAM1Q9Y4F4 1720 aa15.4■□□□□ 0.06
TARDBP-221ENST00000619555 NKX1-1Q15270 411 aaPredicted RBP15.39■□□□□ 0.05
TARDBP-221ENST00000619555 PIGBQ92521 554 aa15.39■□□□□ 0.05
TARDBP-221ENST00000619555 PANK3Q9H999 370 aa15.39■□□□□ 0.05
TARDBP-221ENST00000619555 SPG7Q9UQ90 795 aa15.39■□□□□ 0.05
TARDBP-221ENST00000619555 PKD1L3Q7Z443 1732 aa15.39■□□□□ 0.05
TARDBP-221ENST00000619555 EIF4A2Q14240 407 aaKnown RBP15.38■□□□□ 0.05
TARDBP-221ENST00000619555 MSL1Q68DK7 614 aa15.38■□□□□ 0.05
TARDBP-221ENST00000619555 CHD4Q14839 1912 aa15.37■□□□□ 0.05
TARDBP-221ENST00000619555 GPR162Q16538 588 aa15.37■□□□□ 0.05
TARDBP-221ENST00000619555 NLGN2Q8NFZ4 835 aa15.37■□□□□ 0.05
TARDBP-221ENST00000619555 SMARCC1Q92922 1105 aaPredicted RBP15.37■□□□□ 0.05
TARDBP-221ENST00000619555 TAF1LQ8IZX4 1826 aa15.37■□□□□ 0.05
TARDBP-221ENST00000619555 C5P01031 1676 aa15.37■□□□□ 0.05
TARDBP-221ENST00000619555 ZNF784Q8NCA9 323 aaPredicted RBP15.36■□□□□ 0.05
TARDBP-221ENST00000619555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.36■□□□□ 0.057e-10■■□□□ 14.4
TARDBP-221ENST00000619555 GOLGB1Q14789 3259 aaKnown RBP15.35■□□□□ 0.05
TARDBP-221ENST00000619555 SMIM5Q71RC9 77 aa15.35■□□□□ 0.05
TARDBP-221ENST00000619555 AMIGO3Q86WK7 504 aa15.35■□□□□ 0.05
TARDBP-221ENST00000619555 PELP1Q8IZL8 1130 aaKnown RBP15.35■□□□□ 0.05
TARDBP-221ENST00000619555 PHKG2P15735 406 aa15.34■□□□□ 0.05
TARDBP-221ENST00000619555 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
TARDBP-221ENST00000619555 FLAD1Q8NFF5 587 aa15.33■□□□□ 0.04
TARDBP-221ENST00000619555 AK7Q96M32 723 aa15.33■□□□□ 0.04
TARDBP-221ENST00000619555 TMOD3Q9NYL9 352 aa15.33■□□□□ 0.04
TARDBP-221ENST00000619555 ASAP1Q9ULH1 1129 aa15.33■□□□□ 0.04
TARDBP-221ENST00000619555 C4BP0C0L5 1744 aa15.32■□□□□ 0.04
TARDBP-221ENST00000619555 LOC102724428A0A0B4J2F2 783 aa15.32■□□□□ 0.04
TARDBP-221ENST00000619555 HMGB2P26583 209 aaKnown RBP15.32■□□□□ 0.04
TARDBP-221ENST00000619555 SIK1P57059 783 aa15.32■□□□□ 0.04
TARDBP-221ENST00000619555 LINC00116Q8NCU8 138 aa15.32■□□□□ 0.04
TARDBP-221ENST00000619555 PHF14O94880 888 aa15.31■□□□□ 0.04
TARDBP-221ENST00000619555 MORC1Q86VD1 984 aa15.31■□□□□ 0.04
TARDBP-221ENST00000619555 IGSF1Q8N6C5 1336 aa15.31■□□□□ 0.04
TARDBP-221ENST00000619555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.3■□□□□ 0.04
TARDBP-221ENST00000619555 ITPK1Q13572 414 aa15.3■□□□□ 0.04
TARDBP-221ENST00000619555 UBR3Q6ZT12 1888 aa15.3■□□□□ 0.04
TARDBP-221ENST00000619555 ATG3Q9NT62 314 aa15.3■□□□□ 0.04
TARDBP-221ENST00000619555 YBX3P16989 372 aaKnown RBP eCLIP15.29■□□□□ 0.048e-13■□□□□ 8.1
TARDBP-221ENST00000619555 ATP6V1AP38606 617 aa15.29■□□□□ 0.04
TARDBP-221ENST00000619555 PLEKHO1Q53GL0 409 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms