RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	WASHC2C	Q9Y4E1	1318 aa		5.22	□□□□□ -1.57
UBE2D3-233	ENST00000618836	NWD2	Q9ULI1	1742 aa		5.22	□□□□□ -1.57
UBE2D3-233	ENST00000618836	ZFYVE27	Q5T4F4	411 aa		5.22	□□□□□ -1.57
UBE2D3-233	ENST00000618836	P3H3	Q8IVL6	736 aa		5.22	□□□□□ -1.57
UBE2D3-233	ENST00000618836	SREK1	Q8WXA9	508 aa	Known RBP	5.22	□□□□□ -1.57
UBE2D3-233	ENST00000618836	CLUAP1	Q96AJ1	413 aa		5.22	□□□□□ -1.57
UBE2D3-233	ENST00000618836	RAI14	Q9P0K7	980 aa		5.22	□□□□□ -1.57
UBE2D3-233	ENST00000618836	MYO5C	Q9NQX4	1742 aa		5.22	□□□□□ -1.57
UBE2D3-233	ENST00000618836	ANP32C	O43423	234 aa		5.21	□□□□□ -1.57
UBE2D3-233	ENST00000618836	PPP4C	P60510	307 aa		5.21	□□□□□ -1.57
UBE2D3-233	ENST00000618836	ZKSCAN8	Q15776	578 aa	Predicted RBP	5.21	□□□□□ -1.57
UBE2D3-233	ENST00000618836	ZNF784	Q8NCA9	323 aa	Predicted RBP	5.21	□□□□□ -1.57
UBE2D3-233	ENST00000618836	ARHGEF10L	Q9HCE6	1279 aa		5.21	□□□□□ -1.57
UBE2D3-233	ENST00000618836	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.21	□□□□□ -1.57
UBE2D3-233	ENST00000618836	CIC	Q96RK0	1608 aa	Predicted RBP	5.21	□□□□□ -1.57
UBE2D3-233	ENST00000618836	NLRP1	Q9C000	1473 aa		5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	ANP32A	P39687	249 aa	Known RBP	5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	NBPF6	Q5VWK0	638 aa		5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	NBPF5P	Q86XG9	351 aa	Predicted RBP	5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	JMY	Q8N9B5	988 aa		5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	BORCS6	Q96GS4	357 aa		5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	NBPF4	Q96M43	638 aa		5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	SETD5	Q9C0A6	1442 aa		5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	ADGRB2	O60241	1585 aa		5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	UGGT1	Q9NYU2	1555 aa		5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	ARHGEF28	Q8N1W1	1705 aa	Known RBP	5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	DPYSL4	O14531	572 aa		5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	POLD1	P28340	1107 aa		5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	SERPINA10	Q9UK55	444 aa		5.21	□□□□□ -1.58
UBE2D3-233	ENST00000618836	TMEM131L	A2VDJ0	1609 aa		5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	KCNA1	Q09470	495 aa		5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	UVSSA	Q2YD98	709 aa		5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	UTP14C	Q5TAP6	766 aa	Known RBP	5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	GIMAP6	Q6P9H5	292 aa		5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	CCDC85A	Q96PX6	553 aa	Predicted RBP	5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	CDCA7	Q9BWT1	371 aa	Predicted RBP	5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	NLRP7	Q8WX94	980 aa		5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	TET3	O43151	1660 aa		5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	CHD2	O14647	1828 aa	Known RBP	5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	CCDC194	A0A1B0GVG4	234 aa		5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	WDR78	Q5VTH9	848 aa		5.2	□□□□□ -1.58
UBE2D3-233	ENST00000618836	PEX14	O75381	377 aa		5.19	□□□□□ -1.58
UBE2D3-233	ENST00000618836	FAM43A	Q8N2R8	423 aa		5.19	□□□□□ -1.58
UBE2D3-233	ENST00000618836	ABCA3	Q99758	1704 aa		5.19	□□□□□ -1.58
UBE2D3-233	ENST00000618836	DHX16	O60231	1041 aa	Known RBP	5.19	□□□□□ -1.58
UBE2D3-233	ENST00000618836	PAX3	P23760	479 aa		5.19	□□□□□ -1.58
UBE2D3-233	ENST00000618836	C4orf46	Q504U0	113 aa		5.19	□□□□□ -1.58
UBE2D3-233	ENST00000618836	PMM1	Q92871	262 aa		5.19	□□□□□ -1.58
UBE2D3-233	ENST00000618836	IRF2BPL	Q9H1B7	796 aa		5.19	□□□□□ -1.58
UBE2D3-233	ENST00000618836	PNMA2	Q9UL42	364 aa		5.19	□□□□□ -1.58
UBE2D3-233	ENST00000618836	PRDM15	P57071	1507 aa	Predicted RBP	5.19	□□□□□ -1.58
UBE2D3-233	ENST00000618836	PLEKHG3	A1L390	1219 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	BDNF	P23560	247 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	EVX2	Q03828	476 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	TSR1	Q2NL82	804 aa	Known RBP	5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	ZKSCAN2	Q63HK3	967 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	SENP7	Q9BQF6	1050 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	PLEKHH2	Q8IVE3	1493 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	DLC1	Q96QB1	1528 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	MYOM1	P52179	1685 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	GYS2	P54840	703 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	MAP2K1	Q02750	393 aa	Predicted RBP	5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	FBXO31	Q5XUX0	539 aa	Predicted RBP	5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	GET4	Q7L5D6	327 aa	Predicted RBP	5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	REPIN1	Q9BWE0	567 aa	Known RBP	5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	SYNPO2	Q9UMS6	1093 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	ZNF500	O60304	480 aa	Predicted RBP	5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	PUS10	Q3MIT2	529 aa	Known RBP	5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	LSM14A	Q8ND56	463 aa	Known RBP	5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	KDM4C	Q9H3R0	1056 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	METTL14	Q9HCE5	456 aa	Known RBP	5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	FRMD4B	Q9Y2L6	1034 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	RBM19	Q9Y4C8	960 aa	Known RBP	5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	ZNF518A	Q6AHZ1	1483 aa		5.18	□□□□□ -1.58
UBE2D3-233	ENST00000618836	DSG2	Q14126	1118 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	FNBP4	Q8N3X1	1017 aa	Predicted RBP	5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	MS4A3	Q96HJ5	214 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	GPATCH3	Q96I76	525 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	INO80	Q9ULG1	1556 aa	Predicted RBP	5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	NPHP4	O75161	1426 aa	Predicted RBP	5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	CFAP69	A5D8W1	941 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	FAM200B	P0CF97	657 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	COPB2	P35606	906 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	ZNF467	Q7Z7K2	595 aa	Predicted RBP	5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	RBM46	Q8TBY0	533 aa	Known RBP	5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	UBXN4	Q92575	508 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	COMMD10	Q9Y6G5	202 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	ABCC1	P33527	1531 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	U2SURP	O15042	1029 aa	Known RBP	5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	KIF4A	O95239	1232 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	PARN	O95453	639 aa	Known RBP	5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	MPND	Q8N594	471 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	ATL2	Q8NHH9	583 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	GNL3L	Q9NVN8	582 aa	Known RBP	5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	SYNRG	Q9UMZ2	1314 aa		5.17	□□□□□ -1.58
UBE2D3-233	ENST00000618836	RXRB	P28702	533 aa		5.16	□□□□□ -1.58
UBE2D3-233	ENST00000618836	AMOTL1	Q8IY63	956 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms