RNA–Protein interactions for RNA: ENST00000618785.4

SNX25-207, Transcript of sorting nexin 25, humanhuman

TSL 5 BASIC

Gene SNX25, Length 3,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-207ENST00000618785 WNK3Q9BYP7 1800 aa9.56□□□□□ -0.88
SNX25-207ENST00000618785 USHBP1Q8N6Y0 703 aa9.56□□□□□ -0.88
SNX25-207ENST00000618785 TNS2Q63HR2 1409 aa9.55□□□□□ -0.88
SNX25-207ENST00000618785 DIAPH1O60610 1272 aaKnown RBP9.55□□□□□ -0.88
SNX25-207ENST00000618785 FAM196AQ6ZSG2 479 aa9.55□□□□□ -0.88
SNX25-207ENST00000618785 IGSF1Q8N6C5 1336 aa9.55□□□□□ -0.88
SNX25-207ENST00000618785 NCAPD2Q15021 1401 aa9.55□□□□□ -0.88
SNX25-207ENST00000618785 IL13P35225 146 aa9.55□□□□□ -0.88
SNX25-207ENST00000618785 LRRC37A3O60309 1634 aa9.54□□□□□ -0.88
SNX25-207ENST00000618785 ZCRB1Q8TBF4 217 aaKnown RBP9.54□□□□□ -0.88
SNX25-207ENST00000618785 RGPD2P0DJD1 1756 aa9.54□□□□□ -0.88
SNX25-207ENST00000618785 OVOS2A0A0G2JMS6 1433 aa9.54□□□□□ -0.88
SNX25-207ENST00000618785 MEGF6O75095 1541 aa9.53□□□□□ -0.88
SNX25-207ENST00000618785 FAM182BQ5T319 152 aa9.53□□□□□ -0.88
SNX25-207ENST00000618785 NUDCQ9Y266 331 aa9.53□□□□□ -0.88
SNX25-207ENST00000618785 PLEKHG2Q9H7P9 1386 aa9.53□□□□□ -0.88
SNX25-207ENST00000618785 GIGYF1O75420 1035 aaPredicted RBP9.53□□□□□ -0.88
SNX25-207ENST00000618785 MARCH10Q8NA82 808 aaPredicted RBP9.53□□□□□ -0.88
SNX25-207ENST00000618785 SPG7Q9UQ90 795 aa9.52□□□□□ -0.89
SNX25-207ENST00000618785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.52□□□□□ -0.891e-6■■■□□ 15.8
SNX25-207ENST00000618785 COL3A1P02461 1466 aaPredicted RBP9.51□□□□□ -0.89
SNX25-207ENST00000618785 MYBBP1AQ9BQG0 1328 aaKnown RBP9.51□□□□□ -0.89
SNX25-207ENST00000618785 SULT6B1Q6IMI4 303 aa9.51□□□□□ -0.89
SNX25-207ENST00000618785 DDX54Q8TDD1 881 aaKnown RBP9.51□□□□□ -0.89
SNX25-207ENST00000618785 BCL9O00512 1426 aa9.51□□□□□ -0.89
SNX25-207ENST00000618785 PRKRIP1Q9H875 184 aaPredicted RBP9.51□□□□□ -0.89
SNX25-207ENST00000618785 PCDH11XQ9BZA7 1347 aa9.51□□□□□ -0.89
SNX25-207ENST00000618785 PCDH11YQ9BZA8 1340 aa9.51□□□□□ -0.89
SNX25-207ENST00000618785 U2SURPO15042 1029 aaKnown RBP9.51□□□□□ -0.89
SNX25-207ENST00000618785 PPP1R1BQ9UD71 204 aaPredicted RBP9.51□□□□□ -0.89
SNX25-207ENST00000618785 KDRP35968 1356 aa9.5□□□□□ -0.89
SNX25-207ENST00000618785 R3HDM1Q15032 1099 aaKnown RBP9.5□□□□□ -0.89
SNX25-207ENST00000618785 PLEKHO1Q53GL0 409 aaPredicted RBP9.5□□□□□ -0.89
SNX25-207ENST00000618785 PRELPP51888 382 aa9.5□□□□□ -0.89
SNX25-207ENST00000618785 AMOTQ4VCS5 1084 aa9.5□□□□□ -0.89
SNX25-207ENST00000618785 AEBP1Q8IUX7 1158 aa9.5□□□□□ -0.89
SNX25-207ENST00000618785 RGPD1P0DJD0 1748 aa9.5□□□□□ -0.89
SNX25-207ENST00000618785 TRIM37O94972 964 aa9.49□□□□□ -0.89
SNX25-207ENST00000618785 HMOX1P09601 288 aa9.49□□□□□ -0.89
SNX25-207ENST00000618785 ANP32CO43423 234 aa9.48□□□□□ -0.89
SNX25-207ENST00000618785 U2AF1L5P0DN76 240 aaPredicted RBP9.48□□□□□ -0.89
SNX25-207ENST00000618785 U2AF1Q01081 240 aaKnown RBP eCLIP9.48□□□□□ -0.89
SNX25-207ENST00000618785 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
SNX25-207ENST00000618785 BCL11BQ9C0K0 894 aaPredicted RBP9.48□□□□□ -0.89
SNX25-207ENST00000618785 PKD1L3Q7Z443 1732 aa9.47□□□□□ -0.89
SNX25-207ENST00000618785 SPON1Q9HCB6 807 aa9.47□□□□□ -0.89
SNX25-207ENST00000618785 CYP27B1O15528 508 aa9.47□□□□□ -0.89
SNX25-207ENST00000618785 HSP90AB1P08238 724 aaKnown RBP9.47□□□□□ -0.89
SNX25-207ENST00000618785 CHD4Q14839 1912 aa9.47□□□□□ -0.89
SNX25-207ENST00000618785 APBA3O96018 575 aa9.47□□□□□ -0.89
SNX25-207ENST00000618785 ZNF530Q6P9A1 599 aaPredicted RBP9.47□□□□□ -0.89
SNX25-207ENST00000618785 PHKG2P15735 406 aa9.46□□□□□ -0.89
SNX25-207ENST00000618785 ACSBG1Q96GR2 724 aa9.46□□□□□ -0.89
SNX25-207ENST00000618785 FCHSD2O94868 740 aa9.46□□□□□ -0.9
SNX25-207ENST00000618785 NKX1-1Q15270 411 aaPredicted RBP9.46□□□□□ -0.9
SNX25-207ENST00000618785 C1orf141Q5JVX7 400 aa9.46□□□□□ -0.9
SNX25-207ENST00000618785 SHANK3Q9BYB0 1731 aa9.46□□□□□ -0.9
SNX25-207ENST00000618785 PELP1Q8IZL8 1130 aaKnown RBP9.45□□□□□ -0.9
SNX25-207ENST00000618785 NEFMP07197 916 aa9.45□□□□□ -0.9
SNX25-207ENST00000618785 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
SNX25-207ENST00000618785 PNNQ9H307 717 aaKnown RBP9.45□□□□□ -0.9
SNX25-207ENST00000618785 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
SNX25-207ENST00000618785 GAS2L2Q8NHY3 880 aa9.45□□□□□ -0.9
SNX25-207ENST00000618785 KCNQ2O43526 872 aa9.44□□□□□ -0.9
SNX25-207ENST00000618785 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
SNX25-207ENST00000618785 SYTL4Q96C24 671 aaPredicted RBP9.44□□□□□ -0.9
SNX25-207ENST00000618785 NHSQ6T4R5 1651 aa9.44□□□□□ -0.9
SNX25-207ENST00000618785 TNS1Q9HBL0 1735 aaKnown RBP9.44□□□□□ -0.9
SNX25-207ENST00000618785 AKAP4Q5JQC9 854 aa9.44□□□□□ -0.9
SNX25-207ENST00000618785 DCAF5Q96JK2 942 aa9.44□□□□□ -0.9
SNX25-207ENST00000618785 SBF2Q86WG5 1849 aa9.43□□□□□ -0.9
SNX25-207ENST00000618785 PLSCR1O15162 318 aa9.43□□□□□ -0.9
SNX25-207ENST00000618785 WDR43Q15061 677 aaKnown RBP eCLIP9.43□□□□□ -0.9
SNX25-207ENST00000618785 EN1Q05925 392 aaPredicted RBP9.43□□□□□ -0.9
SNX25-207ENST00000618785 MTHFSDQ2M296 383 aaKnown RBP9.43□□□□□ -0.9
SNX25-207ENST00000618785 PTF1AQ7RTS3 328 aa9.42□□□□□ -0.9
SNX25-207ENST00000618785 CAMKK2Q96RR4 588 aa9.42□□□□□ -0.9
SNX25-207ENST00000618785 DOT1LQ8TEK3 1739 aa9.42□□□□□ -0.9
SNX25-207ENST00000618785 ERVV-2B6SEH9 535 aa9.42□□□□□ -0.9
SNX25-207ENST00000618785 EZH2Q15910 746 aaKnown RBP9.41□□□□□ -0.9
SNX25-207ENST00000618785 TMOD3Q9NYL9 352 aa9.41□□□□□ -0.9
SNX25-207ENST00000618785 MAPK8IP3Q9UPT6 1336 aa9.41□□□□□ -0.9
SNX25-207ENST00000618785 NBPF14Q5TI25 921 aa9.41□□□□□ -0.9
SNX25-207ENST00000618785 MPRIPQ6WCQ1 1025 aa9.41□□□□□ -0.9
SNX25-207ENST00000618785 PHACTR3Q96KR7 559 aa9.4□□□□□ -0.9
SNX25-207ENST00000618785 MAP3K5Q99683 1374 aa9.4□□□□□ -0.9
SNX25-207ENST00000618785 GNAT3A8MTJ3 354 aa9.4□□□□□ -0.9
SNX25-207ENST00000618785 HSPA6P17066 643 aa9.4□□□□□ -0.9
SNX25-207ENST00000618785 CABP4P57796 275 aa9.4□□□□□ -0.9
SNX25-207ENST00000618785 SMARCC1Q92922 1105 aaPredicted RBP9.4□□□□□ -0.9
SNX25-207ENST00000618785 KDM6AO15550 1401 aaPredicted RBP9.4□□□□□ -0.9
SNX25-207ENST00000618785 KAT6BQ8WYB5 2073 aa9.4□□□□□ -0.9
SNX25-207ENST00000618785 RNMTO43148 476 aaKnown RBP9.39□□□□□ -0.91
SNX25-207ENST00000618785 MRS2Q9HD23 443 aa9.39□□□□□ -0.91
SNX25-207ENST00000618785 RGPD3A6NKT7 1758 aaPredicted RBP9.39□□□□□ -0.91
SNX25-207ENST00000618785 RGPD4Q7Z3J3 1758 aa9.39□□□□□ -0.91
SNX25-207ENST00000618785 BTAF1O14981 1849 aa9.39□□□□□ -0.91
SNX25-207ENST00000618785 HMGB2P26583 209 aaKnown RBP9.39□□□□□ -0.91
SNX25-207ENST00000618785 TXNRD1Q16881 649 aa9.39□□□□□ -0.91
SNX25-207ENST00000618785 PIGBQ92521 554 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms