RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 CLSTN1O94985 981 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 CSB-PGBD3P0DP91 1061 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 TMPOP42166 694 aaKnown RBP12.09□□□□□ -0.47
CUL4A-212ENST00000617546 CCDC148Q8NFR7 591 aa12.09□□□□□ -0.47
CUL4A-212ENST00000617546 CCDC150Q8NCX0 1101 aa12.08□□□□□ -0.48
CUL4A-212ENST00000617546 CC2D2AQ9P2K1 1620 aa12.08□□□□□ -0.48
CUL4A-212ENST00000617546 CDKL5O76039 1030 aa12.08□□□□□ -0.48
CUL4A-212ENST00000617546 ME1P48163 572 aa12.08□□□□□ -0.48
CUL4A-212ENST00000617546 SRRTQ9BXP5 876 aaKnown RBP12.08□□□□□ -0.48
CUL4A-212ENST00000617546 SART3Q15020 963 aaKnown RBP12.08□□□□□ -0.48
CUL4A-212ENST00000617546 AMOTL1Q8IY63 956 aa12.08□□□□□ -0.48
CUL4A-212ENST00000617546 GIMAP7Q8NHV1 300 aa12.08□□□□□ -0.48
CUL4A-212ENST00000617546 C1orf115Q9H7X2 142 aa12.08□□□□□ -0.48
CUL4A-212ENST00000617546 NUP160Q12769 1436 aa12.08□□□□□ -0.48
CUL4A-212ENST00000617546 CCDC83Q8IWF9 413 aa12.08□□□□□ -0.48
CUL4A-212ENST00000617546 OGFRQ9NZT2 677 aa12.08□□□□□ -0.48
CUL4A-212ENST00000617546 TXLNAP40222 546 aa12.07□□□□□ -0.48
CUL4A-212ENST00000617546 NOL7Q9UMY1 257 aaKnown RBP12.07□□□□□ -0.48
CUL4A-212ENST00000617546 ABCC5O15440 1437 aa12.07□□□□□ -0.48
CUL4A-212ENST00000617546 ANAPC15P60006 121 aa12.07□□□□□ -0.48
CUL4A-212ENST00000617546 NFE2L2Q16236 605 aa12.07□□□□□ -0.48
CUL4A-212ENST00000617546 ARHGAP45Q92619 1136 aa12.07□□□□□ -0.48
CUL4A-212ENST00000617546 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
CUL4A-212ENST00000617546 HMOX1P09601 288 aa12.07□□□□□ -0.48
CUL4A-212ENST00000617546 NAP1L1P55209 391 aaKnown RBP12.07□□□□□ -0.48
CUL4A-212ENST00000617546 USP25Q9UHP3 1055 aa12.07□□□□□ -0.48
CUL4A-212ENST00000617546 EIF2S2P20042 333 aaKnown RBP12.07□□□□□ -0.48
CUL4A-212ENST00000617546 CASQ1P31415 396 aa12.07□□□□□ -0.48
CUL4A-212ENST00000617546 NUCB1Q02818 461 aa12.07□□□□□ -0.48
CUL4A-212ENST00000617546 LIMCH1Q9UPQ0 1083 aa12.07□□□□□ -0.48
CUL4A-212ENST00000617546 CEP135Q66GS9 1140 aa12.06□□□□□ -0.48
CUL4A-212ENST00000617546 TTC5Q8N0Z6 440 aa12.06□□□□□ -0.48
CUL4A-212ENST00000617546 DNMBPQ6XZF7 1577 aa12.06□□□□□ -0.48
CUL4A-212ENST00000617546 NSD3Q9BZ95 1437 aa12.06□□□□□ -0.48
CUL4A-212ENST00000617546 IGHDP01880 384 aa12.06□□□□□ -0.48
CUL4A-212ENST00000617546 STIM1Q13586 685 aa12.06□□□□□ -0.48
CUL4A-212ENST00000617546 CFAP70Q5T0N1 1121 aa12.06□□□□□ -0.48
CUL4A-212ENST00000617546 CCDC102AQ96A19 550 aa12.05□□□□□ -0.48
CUL4A-212ENST00000617546 STX1AQ16623 288 aa12.05□□□□□ -0.48
CUL4A-212ENST00000617546 TBC1D9Q6ZT07 1266 aa12.05□□□□□ -0.48
CUL4A-212ENST00000617546 INCENPQ9NQS7 918 aa12.05□□□□□ -0.48
CUL4A-212ENST00000617546 ABCA10Q8WWZ4 1543 aa12.05□□□□□ -0.48
CUL4A-212ENST00000617546 CRACR2AQ9BSW2 395 aa12.05□□□□□ -0.48
CUL4A-212ENST00000617546 ZHX1Q9UKY1 873 aaPredicted RBP12.05□□□□□ -0.48
CUL4A-212ENST00000617546 JAKMIP1Q96N16 626 aaKnown RBP12.05□□□□□ -0.48
CUL4A-212ENST00000617546 SCAF11Q99590 1463 aaKnown RBP12.05□□□□□ -0.48
CUL4A-212ENST00000617546 MX1P20591 662 aa12.04□□□□□ -0.48
CUL4A-212ENST00000617546 KIF5CO60282 957 aa12.04□□□□□ -0.48
CUL4A-212ENST00000617546 GABPB1Q06547 395 aaPredicted RBP12.04□□□□□ -0.48
CUL4A-212ENST00000617546 SLC4A2P04920 1241 aa12.04□□□□□ -0.48
CUL4A-212ENST00000617546 ZNF397Q8NF99 534 aaPredicted RBP12.04□□□□□ -0.48
CUL4A-212ENST00000617546 SSH1Q8WYL5 1049 aa12.04□□□□□ -0.48
CUL4A-212ENST00000617546 CTNNA3Q9UI47 895 aa12.04□□□□□ -0.48
CUL4A-212ENST00000617546 PTPRCP08575 1304 aa12.04□□□□□ -0.48
CUL4A-212ENST00000617546 CCDC181Q5TID7 509 aa12.04□□□□□ -0.48
CUL4A-212ENST00000617546 FMNL2Q96PY5 1086 aa12.04□□□□□ -0.48
CUL4A-212ENST00000617546 ZNF692Q9BU19 519 aaPredicted RBP12.04□□□□□ -0.48
CUL4A-212ENST00000617546 CABP2Q9NPB3 220 aa12.04□□□□□ -0.48
CUL4A-212ENST00000617546 GLRX3O76003 335 aaKnown RBP12.04□□□□□ -0.48
CUL4A-212ENST00000617546 HMGB1P09429 215 aaKnown RBP12.04□□□□□ -0.48
CUL4A-212ENST00000617546 WASF1Q92558 559 aa12.04□□□□□ -0.48
CUL4A-212ENST00000617546 EPB41L2O43491 1005 aaKnown RBP12.03□□□□□ -0.48
CUL4A-212ENST00000617546 FAM193AP78312 1265 aa12.03□□□□□ -0.48
CUL4A-212ENST00000617546 SNW1Q13573 536 aaKnown RBP12.03□□□□□ -0.48
CUL4A-212ENST00000617546 ARHGAP29Q52LW3 1261 aa12.03□□□□□ -0.48
CUL4A-212ENST00000617546 TTC22Q5TAA0 569 aa12.03□□□□□ -0.48
CUL4A-212ENST00000617546 PANK2Q9BZ23 570 aa12.03□□□□□ -0.48
CUL4A-212ENST00000617546 RRAGDQ9NQL2 400 aaPredicted RBP12.03□□□□□ -0.48
CUL4A-212ENST00000617546 KIF1BPQ96EK5 621 aa12.02□□□□□ -0.48
CUL4A-212ENST00000617546 V9GYY5 206 aaPredicted RBP12.02□□□□□ -0.48
CUL4A-212ENST00000617546 ASXL1Q8IXJ9 1541 aa12.02□□□□□ -0.48
CUL4A-212ENST00000617546 TUBBP07437 444 aa12.02□□□□□ -0.48
CUL4A-212ENST00000617546 NUTM2DQ5VT03 806 aaPredicted RBP12.02□□□□□ -0.48
CUL4A-212ENST00000617546 PATL2C9JE40 543 aaKnown RBP12.02□□□□□ -0.49
CUL4A-212ENST00000617546 CEP131Q9UPN4 1083 aa12.02□□□□□ -0.49
CUL4A-212ENST00000617546 EIF2AK4Q9P2K8 1649 aaKnown RBP12.02□□□□□ -0.49
CUL4A-212ENST00000617546 STX6O43752 255 aa12.02□□□□□ -0.49
CUL4A-212ENST00000617546 PIK3C2GO75747 1445 aa12.02□□□□□ -0.49
CUL4A-212ENST00000617546 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
CUL4A-212ENST00000617546 ZNF445P59923 1031 aa12.02□□□□□ -0.49
CUL4A-212ENST00000617546 TTLL5Q6EMB2 1281 aa12.02□□□□□ -0.49
CUL4A-212ENST00000617546 RIC3Q7Z5B4 369 aa12.02□□□□□ -0.49
CUL4A-212ENST00000617546 FAM200AQ8TCP9 573 aa12.02□□□□□ -0.49
CUL4A-212ENST00000617546 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
CUL4A-212ENST00000617546 TRIM27P14373 513 aa12.01□□□□□ -0.49
CUL4A-212ENST00000617546 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
CUL4A-212ENST00000617546 CASTP20810 708 aaKnown RBP12.01□□□□□ -0.49
CUL4A-212ENST00000617546 C16orf45Q96MC5 204 aaPredicted RBP12.01□□□□□ -0.49
CUL4A-212ENST00000617546 TRIM22Q8IYM9 498 aa12.01□□□□□ -0.49
CUL4A-212ENST00000617546 LTV1Q96GA3 475 aaPredicted RBP12.01□□□□□ -0.49
CUL4A-212ENST00000617546 INTS4Q96HW7 963 aaKnown RBP12.01□□□□□ -0.49
CUL4A-212ENST00000617546 URI1O94763 535 aaPredicted RBP12.01□□□□□ -0.49
CUL4A-212ENST00000617546 TOPBP1Q92547 1522 aa12□□□□□ -0.49
CUL4A-212ENST00000617546 TOP1P11387 765 aaKnown RBP12□□□□□ -0.49
CUL4A-212ENST00000617546 IMMTQ16891 758 aaKnown RBP12□□□□□ -0.49
CUL4A-212ENST00000617546 CFAP100Q494V2 611 aa12□□□□□ -0.49
CUL4A-212ENST00000617546 POLR3GO15318 223 aaPredicted RBP12□□□□□ -0.49
CUL4A-212ENST00000617546 FOSBP53539 338 aa12□□□□□ -0.49
CUL4A-212ENST00000617546 WASHC4Q2M389 1173 aa12□□□□□ -0.49
CUL4A-212ENST00000617546 HSP90AB3PQ58FF7 597 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms