RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 TMC1Q8TDI8 760 aa19.34■□□□□ 0.69
NOP56-220ENST00000616692 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.34■□□□□ 0.69
NOP56-220ENST00000616692 DISP2A7MBM2 1401 aa19.33■□□□□ 0.69
NOP56-220ENST00000616692 SIN3AQ96ST3 1273 aa19.33■□□□□ 0.68
NOP56-220ENST00000616692 RGPD1P0DJD0 1748 aa19.33■□□□□ 0.68
NOP56-220ENST00000616692 CRYBG1Q9Y4K1 1723 aa19.33■□□□□ 0.68
NOP56-220ENST00000616692 CHMP4CQ96CF2 233 aa19.32■□□□□ 0.68
NOP56-220ENST00000616692 FAM83GA6ND36 823 aa19.31■□□□□ 0.68
NOP56-220ENST00000616692 ITSN1Q15811 1721 aa19.31■□□□□ 0.68
NOP56-220ENST00000616692 BAG6P46379 1132 aa19.31■□□□□ 0.68
NOP56-220ENST00000616692 SLC4A3P48751 1232 aa19.31■□□□□ 0.68
NOP56-220ENST00000616692 ATP7BP35670 1465 aa19.31■□□□□ 0.68
NOP56-220ENST00000616692 THSD7AQ9UPZ6 1657 aa19.3■□□□□ 0.68
NOP56-220ENST00000616692 EGFL6Q8IUX8 553 aa19.3■□□□□ 0.68
NOP56-220ENST00000616692 WASLO00401 505 aaPredicted RBP19.28■□□□□ 0.68
NOP56-220ENST00000616692 SPATA31A5Q5VU36 1347 aa19.28■□□□□ 0.68
NOP56-220ENST00000616692 SPATA31A7Q8IWB4 1347 aa19.28■□□□□ 0.68
NOP56-220ENST00000616692 DYNC1I1O14576 645 aa19.27■□□□□ 0.68
NOP56-220ENST00000616692 CABLES1Q8TDN4 633 aa19.27■□□□□ 0.68
NOP56-220ENST00000616692 PARD3Q8TEW0 1356 aa19.26■□□□□ 0.67
NOP56-220ENST00000616692 CEP120Q8N960 986 aa19.26■□□□□ 0.67
NOP56-220ENST00000616692 MYH16Q9H6N6 1097 aa19.26■□□□□ 0.67
NOP56-220ENST00000616692 PRR29P0C7W0 189 aa19.25■□□□□ 0.67
NOP56-220ENST00000616692 KIAA1210Q9ULL0 1709 aa19.24■□□□□ 0.67
NOP56-220ENST00000616692 PRR36Q9H6K5 1346 aa19.24■□□□□ 0.67
NOP56-220ENST00000616692 BRD4O60885 1362 aaPredicted RBP19.24■□□□□ 0.67
NOP56-220ENST00000616692 RAB3GAP2Q9H2M9 1393 aa19.24■□□□□ 0.67
NOP56-220ENST00000616692 DEFB132Q7Z7B7 95 aa19.24■□□□□ 0.67
NOP56-220ENST00000616692 BTG4Q9NY30 223 aa19.24■□□□□ 0.67
NOP56-220ENST00000616692 ZBED9Q6R2W3 1325 aa19.24■□□□□ 0.67
NOP56-220ENST00000616692 MRE11P49959 708 aa19.23■□□□□ 0.67
NOP56-220ENST00000616692 LMOD2Q6P5Q4 547 aa19.23■□□□□ 0.67
NOP56-220ENST00000616692 PMFBP1Q8TBY8 1022 aa19.23■□□□□ 0.67
NOP56-220ENST00000616692 PSMD1Q99460 953 aa19.22■□□□□ 0.67
NOP56-220ENST00000616692 ARHGEF28Q8N1W1 1705 aaKnown RBP19.22■□□□□ 0.67
NOP56-220ENST00000616692 OS9Q13438 667 aaPredicted RBP19.22■□□□□ 0.67
NOP56-220ENST00000616692 UQCRHLA0A096LP55 91 aa19.21■□□□□ 0.67
NOP56-220ENST00000616692 UQCRHP07919 91 aa19.21■□□□□ 0.67
NOP56-220ENST00000616692 NBPF20Q3BBV1 942 aa19.21■□□□□ 0.67
NOP56-220ENST00000616692 PUS7Q96PZ0 661 aaKnown RBP19.21■□□□□ 0.67
NOP56-220ENST00000616692 POLR3AO14802 1390 aaPredicted RBP19.21■□□□□ 0.67
NOP56-220ENST00000616692 KCNJ4P48050 445 aa19.2■□□□□ 0.66
NOP56-220ENST00000616692 TOPAZ1Q8N9V7 1692 aa19.2■□□□□ 0.66
NOP56-220ENST00000616692 TNS1Q9HBL0 1735 aaKnown RBP19.2■□□□□ 0.66
NOP56-220ENST00000616692 PHRF1Q9P1Y6 1649 aaKnown RBP19.2■□□□□ 0.66
NOP56-220ENST00000616692 TRAK1Q9UPV9 953 aa19.2■□□□□ 0.66
NOP56-220ENST00000616692 NGDNQ8NEJ9 315 aaKnown RBP19.2■□□□□ 0.66
NOP56-220ENST00000616692 SAFB2Q14151 953 aaKnown RBP eCLIP19.19■□□□□ 0.66
NOP56-220ENST00000616692 FAM98CQ17RN3 349 aaKnown RBP19.19■□□□□ 0.66
NOP56-220ENST00000616692 ZBTB9Q96C00 473 aa19.19■□□□□ 0.66
NOP56-220ENST00000616692 SPATA31A1Q5TZJ5 1347 aa19.18■□□□□ 0.66
NOP56-220ENST00000616692 MINK1Q8N4C8 1332 aaPredicted RBP19.18■□□□□ 0.66
NOP56-220ENST00000616692 FAM196AQ6ZSG2 479 aa19.18■□□□□ 0.66
NOP56-220ENST00000616692 BARGINQ6ZT62 677 aa19.18■□□□□ 0.66
NOP56-220ENST00000616692 CPDO75976 1380 aa19.17■□□□□ 0.66
NOP56-220ENST00000616692 PLEKHG3A1L390 1219 aa19.17■□□□□ 0.66
NOP56-220ENST00000616692 PRDM11Q9NQV5 511 aa19.17■□□□□ 0.66
NOP56-220ENST00000616692 NUDT16Q96DE0 195 aaKnown RBP19.17■□□□□ 0.66
NOP56-220ENST00000616692 R3HCC1Q9Y3T6 440 aaKnown RBP19.17■□□□□ 0.66
NOP56-220ENST00000616692 SH3BP1Q9Y3L3 701 aa19.16■□□□□ 0.66
NOP56-220ENST00000616692 SETQ01105 290 aaPredicted RBP19.15■□□□□ 0.66
NOP56-220ENST00000616692 BANK1Q8NDB2 785 aa19.15■□□□□ 0.66
NOP56-220ENST00000616692 RNF123Q5XPI4 1314 aa19.14■□□□□ 0.65
NOP56-220ENST00000616692 A0A0G2JS52 829 aa19.14■□□□□ 0.65
NOP56-220ENST00000616692 CBX1P83916 185 aa19.13■□□□□ 0.65
NOP56-220ENST00000616692 PRDM16Q9HAZ2 1276 aa19.13■□□□□ 0.65
NOP56-220ENST00000616692 THRAP3Q9Y2W1 955 aaKnown RBP19.13■□□□□ 0.65
NOP56-220ENST00000616692 EP400NLQ6ZTU2 488 aa19.13■□□□□ 0.65
NOP56-220ENST00000616692 HIRIP3Q9BW71 556 aaPredicted RBP19.13■□□□□ 0.65
NOP56-220ENST00000616692 USP19O94966 1318 aa19.13■□□□□ 0.65
NOP56-220ENST00000616692 KIAA0232Q92628 1395 aa19.12■□□□□ 0.65
NOP56-220ENST00000616692 IRF6O14896 467 aa19.12■□□□□ 0.65
NOP56-220ENST00000616692 CCDC61Q9Y6R9 512 aa19.12■□□□□ 0.65
NOP56-220ENST00000616692 NRKQ7Z2Y5 1582 aa19.12■□□□□ 0.65
NOP56-220ENST00000616692 LOC102724159A0A0B4J2E5 919 aa19.12■□□□□ 0.65
NOP56-220ENST00000616692 LMOD3Q0VAK6 560 aa19.12■□□□□ 0.65
NOP56-220ENST00000616692 PWP2Q15269 919 aaKnown RBP19.12■□□□□ 0.65
NOP56-220ENST00000616692 LMO7Q8WWI1 1683 aa19.12■□□□□ 0.65
NOP56-220ENST00000616692 TRIM6-TRIM34B2RNG4 842 aa19.11■□□□□ 0.65
NOP56-220ENST00000616692 HSP90AB3PQ58FF7 597 aa19.11■□□□□ 0.65
NOP56-220ENST00000616692 TRIM34Q9BYJ4 488 aa19.11■□□□□ 0.65
NOP56-220ENST00000616692 SSH2Q76I76 1423 aa19.11■□□□□ 0.65
NOP56-220ENST00000616692 RREB1Q92766 1687 aa19.11■□□□□ 0.65
NOP56-220ENST00000616692 CAMKK2Q96RR4 588 aa19.1■□□□□ 0.65
NOP56-220ENST00000616692 CDK19Q9BWU1 502 aa19.1■□□□□ 0.65
NOP56-220ENST00000616692 ZSCAN30Q86W11 494 aa19.09■□□□□ 0.65
NOP56-220ENST00000616692 EN1Q05925 392 aaPredicted RBP19.09■□□□□ 0.65
NOP56-220ENST00000616692 SEMA3FQ13275 785 aa19.09■□□□□ 0.65
NOP56-220ENST00000616692 NBPF8Q3BBV2 869 aa19.09■□□□□ 0.65
NOP56-220ENST00000616692 TSPYL1Q9H0U9 437 aa19.09■□□□□ 0.65
NOP56-220ENST00000616692 GRPEL1Q9HAV7 217 aa19.09■□□□□ 0.65
NOP56-220ENST00000616692 KDM2AQ9Y2K7 1162 aa19.09■□□□□ 0.65
NOP56-220ENST00000616692 ISY1Q9ULR0 285 aaKnown RBP19.08■□□□□ 0.65
NOP56-220ENST00000616692 RGPD3A6NKT7 1758 aaPredicted RBP19.08■□□□□ 0.64
NOP56-220ENST00000616692 RGPD4Q7Z3J3 1758 aa19.08■□□□□ 0.64
NOP56-220ENST00000616692 ACEP12821 1306 aa19.07■□□□□ 0.64
NOP56-220ENST00000616692 EFCC1Q9HA90 598 aa19.07■□□□□ 0.64
NOP56-220ENST00000616692 PARP4Q9UKK3 1724 aaKnown RBP19.07■□□□□ 0.64
NOP56-220ENST00000616692 ZNF771Q7L3S4 317 aaPredicted RBP19.05■□□□□ 0.64
NOP56-220ENST00000616692 NLRP13Q86W25 1043 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms