RNA–Protein interactions for RNA: ENST00000616590.4

GRIA3-206, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 2 BASIC

Gene GRIA3, Length 784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-206ENST00000616590 LRRC37A3O60309 1634 aa12.89□□□□□ -0.35
GRIA3-206ENST00000616590 PARP4Q9UKK3 1724 aaKnown RBP12.89□□□□□ -0.35
GRIA3-206ENST00000616590 APBA3O96018 575 aa12.89□□□□□ -0.35
GRIA3-206ENST00000616590 EN1Q05925 392 aaPredicted RBP12.89□□□□□ -0.35
GRIA3-206ENST00000616590 PTF1AQ7RTS3 328 aa12.89□□□□□ -0.35
GRIA3-206ENST00000616590 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
GRIA3-206ENST00000616590 NSD2O96028 1365 aa12.89□□□□□ -0.35
GRIA3-206ENST00000616590 ABCB7O75027 752 aa12.88□□□□□ -0.35
GRIA3-206ENST00000616590 EIF4A2Q14240 407 aaKnown RBP12.88□□□□□ -0.35
GRIA3-206ENST00000616590 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
GRIA3-206ENST00000616590 ANKRD26Q9UPS8 1709 aa12.88□□□□□ -0.35
GRIA3-206ENST00000616590 ZEB1P37275 1124 aaPredicted RBP12.87□□□□□ -0.35
GRIA3-206ENST00000616590 BAG6P46379 1132 aa12.87□□□□□ -0.35
GRIA3-206ENST00000616590 RAPGEF4Q8WZA2 1011 aa12.87□□□□□ -0.35
GRIA3-206ENST00000616590 EYA1Q99502 592 aa12.87□□□□□ -0.35
GRIA3-206ENST00000616590 OVOS2A0A0G2JMS6 1433 aa12.87□□□□□ -0.35
GRIA3-206ENST00000616590 WNK3Q9BYP7 1800 aa12.86□□□□□ -0.35
GRIA3-206ENST00000616590 KIF24Q5T7B8 1368 aa12.86□□□□□ -0.35
GRIA3-206ENST00000616590 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
GRIA3-206ENST00000616590 MTHFSP49914 203 aa12.86□□□□□ -0.35
GRIA3-206ENST00000616590 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
GRIA3-206ENST00000616590 MEGF6O75095 1541 aa12.85□□□□□ -0.35
GRIA3-206ENST00000616590 KCNQ2O43526 872 aa12.85□□□□□ -0.35
GRIA3-206ENST00000616590 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
GRIA3-206ENST00000616590 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
GRIA3-206ENST00000616590 TNS2Q63HR2 1409 aa12.85□□□□□ -0.35
GRIA3-206ENST00000616590 FAM208AQ9UK61 1670 aaKnown RBP12.84□□□□□ -0.35
GRIA3-206ENST00000616590 SYTL4Q96C24 671 aaPredicted RBP12.82□□□□□ -0.36
GRIA3-206ENST00000616590 BCL11BQ9C0K0 894 aaPredicted RBP12.82□□□□□ -0.36
GRIA3-206ENST00000616590 RGPD1P0DJD0 1748 aa12.82□□□□□ -0.36
GRIA3-206ENST00000616590 POLA2Q14181 598 aa12.81□□□□□ -0.36
GRIA3-206ENST00000616590 AEBP1Q8IUX7 1158 aa12.81□□□□□ -0.36
GRIA3-206ENST00000616590 CAMKK2Q96RR4 588 aa12.81□□□□□ -0.36
GRIA3-206ENST00000616590 TNS1Q9HBL0 1735 aaKnown RBP12.8□□□□□ -0.36
GRIA3-206ENST00000616590 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
GRIA3-206ENST00000616590 IL13P35225 146 aa12.8□□□□□ -0.36
GRIA3-206ENST00000616590 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
GRIA3-206ENST00000616590 SULT6B1Q6IMI4 303 aa12.8□□□□□ -0.36
GRIA3-206ENST00000616590 HMOX1P09601 288 aa12.79□□□□□ -0.36
GRIA3-206ENST00000616590 NPC1L1Q9UHC9 1359 aa12.79□□□□□ -0.36
GRIA3-206ENST00000616590 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
GRIA3-206ENST00000616590 CYP27B1O15528 508 aa12.78□□□□□ -0.36
GRIA3-206ENST00000616590 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
GRIA3-206ENST00000616590 PPP2R1AP30153 589 aa12.78□□□□□ -0.36
GRIA3-206ENST00000616590 SPG7Q9UQ90 795 aa12.78□□□□□ -0.36
GRIA3-206ENST00000616590 IGSF1Q8N6C5 1336 aa12.78□□□□□ -0.36
GRIA3-206ENST00000616590 DSG3P32926 999 aa12.77□□□□□ -0.37
GRIA3-206ENST00000616590 PCDH11XQ9BZA7 1347 aa12.77□□□□□ -0.37
GRIA3-206ENST00000616590 PCDH11YQ9BZA8 1340 aa12.77□□□□□ -0.37
GRIA3-206ENST00000616590 SBF2Q86WG5 1849 aa12.76□□□□□ -0.37
GRIA3-206ENST00000616590 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
GRIA3-206ENST00000616590 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
GRIA3-206ENST00000616590 BCL9O00512 1426 aa12.75□□□□□ -0.37
GRIA3-206ENST00000616590 KCNQ4P56696 695 aa12.75□□□□□ -0.37
GRIA3-206ENST00000616590 NCAPD2Q15021 1401 aa12.75□□□□□ -0.37
GRIA3-206ENST00000616590 MPRIPQ6WCQ1 1025 aa12.75□□□□□ -0.37
GRIA3-206ENST00000616590 PROM2Q8N271 834 aa12.75□□□□□ -0.37
GRIA3-206ENST00000616590 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
GRIA3-206ENST00000616590 PLSCR1O15162 318 aa12.74□□□□□ -0.37
GRIA3-206ENST00000616590 TXNRD1Q16881 649 aa12.74□□□□□ -0.37
GRIA3-206ENST00000616590 PLEKHO1Q53GL0 409 aaPredicted RBP12.74□□□□□ -0.37
GRIA3-206ENST00000616590 ZNF530Q6P9A1 599 aaPredicted RBP12.74□□□□□ -0.37
GRIA3-206ENST00000616590 CFAP53Q96M91 514 aa12.74□□□□□ -0.37
GRIA3-206ENST00000616590 PHKG2P15735 406 aa12.73□□□□□ -0.37
GRIA3-206ENST00000616590 IFNL2Q8IZJ0 200 aa12.73□□□□□ -0.37
GRIA3-206ENST00000616590 DOT1LQ8TEK3 1739 aa12.72□□□□□ -0.37
GRIA3-206ENST00000616590 NBPF14Q5TI25 921 aa12.72□□□□□ -0.37
GRIA3-206ENST00000616590 NHSQ6T4R5 1651 aa12.72□□□□□ -0.37
GRIA3-206ENST00000616590 ZNF316A6NFI3 1004 aaPredicted RBP12.71□□□□□ -0.37
GRIA3-206ENST00000616590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.71□□□□□ -0.37
GRIA3-206ENST00000616590 COL3A1P02461 1466 aaPredicted RBP12.71□□□□□ -0.38
GRIA3-206ENST00000616590 PARD3Q8TEW0 1356 aa12.7□□□□□ -0.38
GRIA3-206ENST00000616590 BTAF1O14981 1849 aa12.7□□□□□ -0.38
GRIA3-206ENST00000616590 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
GRIA3-206ENST00000616590 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
GRIA3-206ENST00000616590 AMOTQ4VCS5 1084 aa12.7□□□□□ -0.38
GRIA3-206ENST00000616590 C1orf141Q5JVX7 400 aa12.7□□□□□ -0.38
GRIA3-206ENST00000616590 PIGBQ92521 554 aa12.7□□□□□ -0.38
GRIA3-206ENST00000616590 ANO8Q9HCE9 1232 aaPredicted RBP12.7□□□□□ -0.38
GRIA3-206ENST00000616590 PKD1L3Q7Z443 1732 aa12.7□□□□□ -0.38
GRIA3-206ENST00000616590 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
GRIA3-206ENST00000616590 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
GRIA3-206ENST00000616590 TMOD3Q9NYL9 352 aa12.69□□□□□ -0.38
GRIA3-206ENST00000616590 NUDCQ9Y266 331 aa12.69□□□□□ -0.38
GRIA3-206ENST00000616590 KDRP35968 1356 aa12.69□□□□□ -0.38
GRIA3-206ENST00000616590 MTHFSDQ2M296 383 aaKnown RBP12.68□□□□□ -0.38
GRIA3-206ENST00000616590 NUP188Q5SRE5 1749 aa12.68□□□□□ -0.38
GRIA3-206ENST00000616590 RREB1Q92766 1687 aa12.67□□□□□ -0.38
GRIA3-206ENST00000616590 PRKAR2BP31323 418 aa12.67□□□□□ -0.38
GRIA3-206ENST00000616590 CABP4P57796 275 aa12.67□□□□□ -0.38
GRIA3-206ENST00000616590 RALBP1Q15311 655 aa12.67□□□□□ -0.38
GRIA3-206ENST00000616590 PDGFDQ9GZP0 370 aaPredicted RBP12.67□□□□□ -0.38
GRIA3-206ENST00000616590 STK32BQ9NY57 414 aa12.67□□□□□ -0.38
GRIA3-206ENST00000616590 CCNL1Q9UK58 526 aaPredicted RBP12.67□□□□□ -0.38
GRIA3-206ENST00000616590 ASAP1Q9ULH1 1129 aa12.67□□□□□ -0.38
GRIA3-206ENST00000616590 TOGARAM1Q9Y4F4 1720 aa12.67□□□□□ -0.38
GRIA3-206ENST00000616590 DCAF5Q96JK2 942 aa12.66□□□□□ -0.38
GRIA3-206ENST00000616590 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
GRIA3-206ENST00000616590 LGR6Q9HBX8 967 aa12.66□□□□□ -0.38
GRIA3-206ENST00000616590 HSP90AB1P08238 724 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms