RNA–Protein interactions for RNA: ENST00000616373.1

LINC00943-208, long intergenic non-protein coding RNA 943, humanhuman

TSL 2

Gene LINC00943, Length 420 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-208ENST00000616373 GPR37L1O60883 481 aa8.42□□□□□ -1.06
LINC00943-208ENST00000616373 CCDC155Q8N6L0 562 aa8.42□□□□□ -1.06
LINC00943-208ENST00000616373 KDF1Q8NAX2 398 aaPredicted RBP8.42□□□□□ -1.06
LINC00943-208ENST00000616373 PRM3Q9NNZ6 103 aa8.42□□□□□ -1.06
LINC00943-208ENST00000616373 SLC35F4A4IF30 521 aa8.41□□□□□ -1.06
LINC00943-208ENST00000616373 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
LINC00943-208ENST00000616373 ATP5J2-PTCD1G3V325 749 aa8.4□□□□□ -1.06
LINC00943-208ENST00000616373 ERVK-9P63128 1117 aa8.4□□□□□ -1.06
LINC00943-208ENST00000616373 FOXD4L5Q5VV16 416 aaPredicted RBP8.4□□□□□ -1.06
LINC00943-208ENST00000616373 CC2D2BQ6DHV5 1058 aa8.4□□□□□ -1.06
LINC00943-208ENST00000616373 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
LINC00943-208ENST00000616373 ITGA6P23229 1130 aa8.38□□□□□ -1.07
LINC00943-208ENST00000616373 RNF144AP50876 292 aaPredicted RBP8.38□□□□□ -1.07
LINC00943-208ENST00000616373 LYSMD3Q7Z3D4 306 aa8.38□□□□□ -1.07
LINC00943-208ENST00000616373 GPC1P35052 558 aa8.37□□□□□ -1.07
LINC00943-208ENST00000616373 CYP2U1Q7Z449 544 aa8.37□□□□□ -1.07
LINC00943-208ENST00000616373 ESF1Q9H501 851 aaKnown RBP8.37□□□□□ -1.07
LINC00943-208ENST00000616373 PCDHB11Q9Y5F2 797 aa8.37□□□□□ -1.07
LINC00943-208ENST00000616373 TBC1D2BQ9UPU7 963 aa8.36□□□□□ -1.07
LINC00943-208ENST00000616373 SENP3-EIF4A1A0A087X0R7 540 aa8.35□□□□□ -1.07
LINC00943-208ENST00000616373 A0A1W2PRU2 124 aa8.34□□□□□ -1.07
LINC00943-208ENST00000616373 CDC14CA4D256 554 aa8.34□□□□□ -1.07
LINC00943-208ENST00000616373 MEN1O00255 615 aa8.34□□□□□ -1.07
LINC00943-208ENST00000616373 SCTRP47872 440 aa8.34□□□□□ -1.07
LINC00943-208ENST00000616373 EIF4G2P78344 907 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC00943-208ENST00000616373 SV2AQ7L0J3 742 aa8.34□□□□□ -1.07
LINC00943-208ENST00000616373 GPR161Q8N6U8 529 aaKnown RBP8.34□□□□□ -1.07
LINC00943-208ENST00000616373 PRICKLE2Q7Z3G6 844 aa8.33□□□□□ -1.08
LINC00943-208ENST00000616373 NLRP3Q96P20 1036 aa8.33□□□□□ -1.08
LINC00943-208ENST00000616373 COL25A1Q9BXS0 654 aaPredicted RBP8.33□□□□□ -1.08
LINC00943-208ENST00000616373 CEP126Q9P2H0 1117 aa8.33□□□□□ -1.08
LINC00943-208ENST00000616373 TRAK2O60296 914 aa8.32□□□□□ -1.08
LINC00943-208ENST00000616373 KRT76Q01546 638 aa8.32□□□□□ -1.08
LINC00943-208ENST00000616373 CLN3Q13286 438 aa8.32□□□□□ -1.08
LINC00943-208ENST00000616373 VWA5B2Q8N398 1253 aa8.32□□□□□ -1.08
LINC00943-208ENST00000616373 CNTNAP3BQ96NU0 1288 aa8.32□□□□□ -1.08
LINC00943-208ENST00000616373 CNTNAP3Q9BZ76 1288 aa8.32□□□□□ -1.08
LINC00943-208ENST00000616373 OSBPL3Q9H4L5 887 aa8.32□□□□□ -1.08
LINC00943-208ENST00000616373 MYCP01106 439 aaPredicted RBP8.31□□□□□ -1.08
LINC00943-208ENST00000616373 SLC27A3Q5K4L6 730 aa8.31□□□□□ -1.08
LINC00943-208ENST00000616373 GNRH1P01148 92 aa8.3□□□□□ -1.08
LINC00943-208ENST00000616373 RHOQP17081 205 aa8.3□□□□□ -1.08
LINC00943-208ENST00000616373 IRF5Q13568 498 aa8.3□□□□□ -1.08
LINC00943-208ENST00000616373 GMCL1Q96IK5 515 aa8.3□□□□□ -1.08
LINC00943-208ENST00000616373 ARHGEF10LQ9HCE6 1279 aa8.3□□□□□ -1.08
LINC00943-208ENST00000616373 CUX2O14529 1486 aa8.3□□□□□ -1.08
LINC00943-208ENST00000616373 CCDC85AQ96PX6 553 aaPredicted RBP8.29□□□□□ -1.08
LINC00943-208ENST00000616373 WASHC4Q2M389 1173 aa8.28□□□□□ -1.08
LINC00943-208ENST00000616373 SLFNL1Q499Z3 407 aa8.28□□□□□ -1.08
LINC00943-208ENST00000616373 WDR44Q5JSH3 913 aa8.28□□□□□ -1.08
LINC00943-208ENST00000616373 RNFT1Q5M7Z0 435 aa8.28□□□□□ -1.08
LINC00943-208ENST00000616373 GRIP2Q9C0E4 1043 aa8.28□□□□□ -1.08
LINC00943-208ENST00000616373 GDPD2Q9HCC8 539 aa8.28□□□□□ -1.08
LINC00943-208ENST00000616373 DYRK1BQ9Y463 629 aa8.28□□□□□ -1.08
LINC00943-208ENST00000616373 PRKCSHP14314 528 aaPredicted RBP8.27□□□□□ -1.09
LINC00943-208ENST00000616373 DOLKQ9UPQ8 538 aa8.27□□□□□ -1.09
LINC00943-208ENST00000616373 SPATA31C2B4DYI2 1134 aa8.26□□□□□ -1.09
LINC00943-208ENST00000616373 ABL2P42684 1182 aa8.26□□□□□ -1.09
LINC00943-208ENST00000616373 POU4F2Q12837 409 aa8.26□□□□□ -1.09
LINC00943-208ENST00000616373 USP4Q13107 963 aa8.26□□□□□ -1.09
LINC00943-208ENST00000616373 MCM6Q14566 821 aa8.26□□□□□ -1.09
LINC00943-208ENST00000616373 NBPF10Q6P3W6 841 aaKnown RBP8.26□□□□□ -1.09
LINC00943-208ENST00000616373 RNF135Q8IUD6 432 aa8.26□□□□□ -1.09
LINC00943-208ENST00000616373 TRIM22Q8IYM9 498 aa8.26□□□□□ -1.09
LINC00943-208ENST00000616373 NBPF15Q8N660 670 aa8.26□□□□□ -1.09
LINC00943-208ENST00000616373 CNKSR1Q969H4 720 aa8.26□□□□□ -1.09
LINC00943-208ENST00000616373 ESYT1Q9BSJ8 1104 aa8.26□□□□□ -1.09
LINC00943-208ENST00000616373 CDCA7Q9BWT1 371 aaPredicted RBP8.26□□□□□ -1.09
LINC00943-208ENST00000616373 RAB6BQ9NRW1 208 aa8.26□□□□□ -1.09
LINC00943-208ENST00000616373 H7C1W4 665 aa8.25□□□□□ -1.09
LINC00943-208ENST00000616373 SLURP2P0DP57 97 aa8.25□□□□□ -1.09
LINC00943-208ENST00000616373 VAC14Q08AM6 782 aa8.25□□□□□ -1.09
LINC00943-208ENST00000616373 ESCO1Q5FWF5 840 aa8.25□□□□□ -1.09
LINC00943-208ENST00000616373 FOXR1Q6PIV2 292 aa8.25□□□□□ -1.09
LINC00943-208ENST00000616373 TAS1R3Q7RTX0 852 aa8.25□□□□□ -1.09
LINC00943-208ENST00000616373 PHTF2Q8N3S3 785 aa8.25□□□□□ -1.09
LINC00943-208ENST00000616373 SIRT1Q96EB6 747 aa8.25□□□□□ -1.09
LINC00943-208ENST00000616373 ZNF837Q96EG3 531 aaPredicted RBP8.25□□□□□ -1.09
LINC00943-208ENST00000616373 CUEDC1Q9NWM3 386 aaPredicted RBP8.25□□□□□ -1.09
LINC00943-208ENST00000616373 WASLO00401 505 aaPredicted RBP8.24□□□□□ -1.09
LINC00943-208ENST00000616373 IL2RAP01589 272 aa8.24□□□□□ -1.09
LINC00943-208ENST00000616373 SOX11P35716 441 aa8.24□□□□□ -1.09
LINC00943-208ENST00000616373 RIPOR1Q6ZS17 1223 aa8.24□□□□□ -1.09
LINC00943-208ENST00000616373 GTF2E1P29083 439 aaPredicted RBP8.23□□□□□ -1.09
LINC00943-208ENST00000616373 SRSF11Q05519 484 aaKnown RBP8.23□□□□□ -1.09
LINC00943-208ENST00000616373 SVOPQ8N4V2 548 aa8.23□□□□□ -1.09
LINC00943-208ENST00000616373 GAS2L1Q99501 681 aaPredicted RBP8.23□□□□□ -1.09
LINC00943-208ENST00000616373 TIMMDC1Q9NPL8 285 aa8.23□□□□□ -1.09
LINC00943-208ENST00000616373 CHIC2Q9UKJ5 165 aa8.23□□□□□ -1.09
LINC00943-208ENST00000616373 CENPCQ03188 943 aa8.22□□□□□ -1.09
LINC00943-208ENST00000616373 SEMA3FQ13275 785 aa8.22□□□□□ -1.09
LINC00943-208ENST00000616373 ZNF385CQ66K41 422 aaPredicted RBP8.22□□□□□ -1.09
LINC00943-208ENST00000616373 XAGE2Q96GT9 111 aa8.22□□□□□ -1.09
LINC00943-208ENST00000616373 ZSCAN10Q96SZ4 725 aaPredicted RBP8.22□□□□□ -1.09
LINC00943-208ENST00000616373 ADAMTS2O95450 1211 aa8.21□□□□□ -1.1
LINC00943-208ENST00000616373 GAS6Q14393 721 aa8.21□□□□□ -1.1
LINC00943-208ENST00000616373 DBN1Q16643 649 aa8.21□□□□□ -1.1
LINC00943-208ENST00000616373 MAP7D1Q3KQU3 841 aa8.21□□□□□ -1.1
LINC00943-208ENST00000616373 OXLD1Q5BKU9 147 aa8.21□□□□□ -1.1
LINC00943-208ENST00000616373 HRH3Q9Y5N1 445 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms