RNA–Protein interactions for RNA: ENST00000615520.1

LHX9-208, Transcript of LIM homeobox 9, humanhuman

Gene LHX9, Length 1,051 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-208ENST00000615520 OVOS2A0A0G2JMS6 1433 aa24.19■■□□□ 1.46
LHX9-208ENST00000615520 KDRP35968 1356 aa24.19■■□□□ 1.46
LHX9-208ENST00000615520 PKD1L3Q7Z443 1732 aa24.19■■□□□ 1.46
LHX9-208ENST00000615520 CCER2I3L3R5 266 aa24.19■■□□□ 1.46
LHX9-208ENST00000615520 DDB1Q16531 1140 aa24.19■■□□□ 1.46
LHX9-208ENST00000615520 EXOC5O00471 708 aa24.18■■□□□ 1.46
LHX9-208ENST00000615520 PRKAR2BP31323 418 aa24.18■■□□□ 1.46
LHX9-208ENST00000615520 NEFMP07197 916 aa24.17■■□□□ 1.46
LHX9-208ENST00000615520 PDE3BQ13370 1112 aa24.17■■□□□ 1.46
LHX9-208ENST00000615520 SHANK3Q9BYB0 1731 aa24.17■■□□□ 1.46
LHX9-208ENST00000615520 TNS2Q63HR2 1409 aa24.17■■□□□ 1.46
LHX9-208ENST00000615520 ONECUT3O60422 494 aaPredicted RBP24.16■■□□□ 1.46
LHX9-208ENST00000615520 FAM9BQ8IZU0 186 aa24.16■■□□□ 1.46
LHX9-208ENST00000615520 RSPH6AQ9H0K4 717 aa24.16■■□□□ 1.46
LHX9-208ENST00000615520 FCHSD2O94868 740 aa24.15■■□□□ 1.46
LHX9-208ENST00000615520 ZCRB1Q8TBF4 217 aaKnown RBP24.15■■□□□ 1.46
LHX9-208ENST00000615520 ADAMTS8Q9UP79 889 aa24.15■■□□□ 1.46
LHX9-208ENST00000615520 SPG7Q9UQ90 795 aa24.15■■□□□ 1.46
LHX9-208ENST00000615520 PLEKHO1Q53GL0 409 aaPredicted RBP24.14■■□□□ 1.45
LHX9-208ENST00000615520 DDX54Q8TDD1 881 aaKnown RBP24.14■■□□□ 1.45
LHX9-208ENST00000615520 PNNQ9H307 717 aaKnown RBP24.14■■□□□ 1.45
LHX9-208ENST00000615520 MAPK8IP3Q9UPT6 1336 aa24.13■■□□□ 1.45
LHX9-208ENST00000615520 CCDC146Q8IYE0 955 aa24.13■■□□□ 1.45
LHX9-208ENST00000615520 PNISRQ8TF01 805 aaKnown RBP24.13■■□□□ 1.45
LHX9-208ENST00000615520 ZNF530Q6P9A1 599 aaPredicted RBP24.11■■□□□ 1.45
LHX9-208ENST00000615520 KRT27Q7Z3Y8 459 aa24.11■■□□□ 1.45
LHX9-208ENST00000615520 PCDH11XQ9BZA7 1347 aa24.1■■□□□ 1.45
LHX9-208ENST00000615520 PCDH11YQ9BZA8 1340 aa24.1■■□□□ 1.45
LHX9-208ENST00000615520 AMOTQ4VCS5 1084 aa24.1■■□□□ 1.45
LHX9-208ENST00000615520 FAM182BQ5T319 152 aa24.09■■□□□ 1.45
LHX9-208ENST00000615520 C1orf141Q5JVX7 400 aa24.08■■□□□ 1.45
LHX9-208ENST00000615520 PHACTR3Q96KR7 559 aa24.08■■□□□ 1.45
LHX9-208ENST00000615520 VIRMAQ69YN4 1812 aaKnown RBP24.07■■□□□ 1.44
LHX9-208ENST00000615520 KAT6BQ8WYB5 2073 aa24.07■■□□□ 1.44
LHX9-208ENST00000615520 SOCS7O14512 581 aa24.07■■□□□ 1.44
LHX9-208ENST00000615520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.07■■□□□ 1.44
LHX9-208ENST00000615520 DLG5Q8TDM6 1919 aa24.07■■□□□ 1.44
LHX9-208ENST00000615520 PLEKHG2Q9H7P9 1386 aa24.06■■□□□ 1.44
LHX9-208ENST00000615520 MTHFSDQ2M296 383 aaKnown RBP24.06■■□□□ 1.44
LHX9-208ENST00000615520 RUNDC1Q96C34 613 aa24.06■■□□□ 1.44
LHX9-208ENST00000615520 IFNL2Q8IZJ0 200 aa24.05■■□□□ 1.44
LHX9-208ENST00000615520 MARCH10Q8NA82 808 aaPredicted RBP24.05■■□□□ 1.44
LHX9-208ENST00000615520 GAS2L2Q8NHY3 880 aa24.05■■□□□ 1.44
LHX9-208ENST00000615520 PLEKHF1Q96S99 279 aa24.05■■□□□ 1.44
LHX9-208ENST00000615520 DOT1LQ8TEK3 1739 aa24.04■■□□□ 1.44
LHX9-208ENST00000615520 CYP27B1O15528 508 aa24.04■■□□□ 1.44
LHX9-208ENST00000615520 PHKG2P15735 406 aa24.02■■□□□ 1.44
LHX9-208ENST00000615520 SENP3-EIF4A1A0A087X0R7 540 aa24.01■■□□□ 1.43
LHX9-208ENST00000615520 NEUROD2Q15784 382 aa24■■□□□ 1.43
LHX9-208ENST00000615520 AKAP4Q5JQC9 854 aa24■■□□□ 1.43
LHX9-208ENST00000615520 RRP7AQ9Y3A4 280 aaKnown RBP24■■□□□ 1.43
LHX9-208ENST00000615520 SBF2Q86WG5 1849 aa24■■□□□ 1.43
LHX9-208ENST00000615520 MAP3K5Q99683 1374 aa24■■□□□ 1.43
LHX9-208ENST00000615520 SCN11AQ9UI33 1791 aa23.99■■□□□ 1.43
LHX9-208ENST00000615520 NFE2L2Q16236 605 aa23.99■■□□□ 1.43
LHX9-208ENST00000615520 TOGARAM1Q9Y4F4 1720 aa23.98■■□□□ 1.43
LHX9-208ENST00000615520 HSP90AB1P08238 724 aaKnown RBP23.98■■□□□ 1.43
LHX9-208ENST00000615520 FAM196AQ6ZSG2 479 aa23.98■■□□□ 1.43
LHX9-208ENST00000615520 ACSBG1Q96GR2 724 aa23.98■■□□□ 1.43
LHX9-208ENST00000615520 GNAT3A8MTJ3 354 aa23.97■■□□□ 1.43
LHX9-208ENST00000615520 APAF1O14727 1248 aa23.97■■□□□ 1.43
LHX9-208ENST00000615520 ITGB4P16144 1822 aa23.97■■□□□ 1.43
LHX9-208ENST00000615520 MPRIPQ6WCQ1 1025 aa23.97■■□□□ 1.43
LHX9-208ENST00000615520 RTF1Q92541 710 aaKnown RBP23.97■■□□□ 1.43
LHX9-208ENST00000615520 SYTL4Q96C24 671 aaPredicted RBP23.97■■□□□ 1.43
LHX9-208ENST00000615520 TMPOP42166 694 aaKnown RBP23.95■■□□□ 1.42
LHX9-208ENST00000615520 RIPK4P57078 832 aa23.95■■□□□ 1.42
LHX9-208ENST00000615520 NHSQ6T4R5 1651 aa23.95■■□□□ 1.42
LHX9-208ENST00000615520 DCAF5Q96JK2 942 aa23.94■■□□□ 1.42
LHX9-208ENST00000615520 KDM6AO15550 1401 aaPredicted RBP23.93■■□□□ 1.42
LHX9-208ENST00000615520 NKX1-1Q15270 411 aaPredicted RBP23.92■■□□□ 1.42
LHX9-208ENST00000615520 SALL2Q9Y467 1007 aaPredicted RBP23.92■■□□□ 1.42
LHX9-208ENST00000615520 RNMTO43148 476 aaKnown RBP23.91■■□□□ 1.42
LHX9-208ENST00000615520 TRIM37O94972 964 aa23.91■■□□□ 1.42
LHX9-208ENST00000615520 LMOD3Q0VAK6 560 aa23.91■■□□□ 1.42
LHX9-208ENST00000615520 DCTN1Q14203 1278 aa23.91■■□□□ 1.42
LHX9-208ENST00000615520 MCM10Q7L590 875 aa23.91■■□□□ 1.42
LHX9-208ENST00000615520 LGR6Q9HBX8 967 aa23.91■■□□□ 1.42
LHX9-208ENST00000615520 PRIM1P49642 420 aaKnown RBP23.9■■□□□ 1.42
LHX9-208ENST00000615520 ADAMTS7Q9UKP4 1686 aa23.89■■□□□ 1.42
LHX9-208ENST00000615520 BTAF1O14981 1849 aa23.89■■□□□ 1.42
LHX9-208ENST00000615520 CABP4P57796 275 aa23.89■■□□□ 1.41
LHX9-208ENST00000615520 BCL9O00512 1426 aa23.88■■□□□ 1.41
LHX9-208ENST00000615520 KCNQ2O43526 872 aa23.88■■□□□ 1.41
LHX9-208ENST00000615520 TEFQ10587 303 aa23.88■■□□□ 1.41
LHX9-208ENST00000615520 TMOD3Q9NYL9 352 aa23.88■■□□□ 1.41
LHX9-208ENST00000615520 TNS1Q9HBL0 1735 aaKnown RBP23.87■■□□□ 1.41
LHX9-208ENST00000615520 HTATSF1O43719 755 aaKnown RBP23.87■■□□□ 1.41
LHX9-208ENST00000615520 IL17REQ8NFR9 667 aa23.87■■□□□ 1.41
LHX9-208ENST00000615520 THUMPD2Q9BTF0 503 aaKnown RBP23.87■■□□□ 1.41
LHX9-208ENST00000615520 ERVV-2B6SEH9 535 aa23.85■■□□□ 1.41
LHX9-208ENST00000615520 SIPA1L3O60292 1781 aaPredicted RBP23.85■■□□□ 1.41
LHX9-208ENST00000615520 SF3B2Q13435 895 aaKnown RBP23.84■■□□□ 1.41
LHX9-208ENST00000615520 PTF1AQ7RTS3 328 aa23.84■■□□□ 1.41
LHX9-208ENST00000615520 MRC1P22897 1456 aa23.83■■□□□ 1.41
LHX9-208ENST00000615520 NFATC2IPQ8NCF5 419 aa23.83■■□□□ 1.41
LHX9-208ENST00000615520 BCL11BQ9C0K0 894 aaPredicted RBP23.83■■□□□ 1.41
LHX9-208ENST00000615520 SLC52A2Q9HAB3 445 aa23.83■■□□□ 1.41
LHX9-208ENST00000615520 TRIM35Q9UPQ4 493 aa23.83■■□□□ 1.41
LHX9-208ENST00000615520 CEMIPQ8WUJ3 1361 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms