RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 FOXD4L6Q3SYB3 417 aaPredicted RBP3.85□□□□□ -1.79
CBWD3-209ENST00000614377 WDR78Q5VTH9 848 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 NBPF6Q5VWK0 638 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 FOXD4L3Q6VB84 417 aaPredicted RBP3.85□□□□□ -1.79
CBWD3-209ENST00000614377 NBPF5PQ86XG9 351 aaPredicted RBP3.85□□□□□ -1.79
CBWD3-209ENST00000614377 MICAL1Q8TDZ2 1067 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 UBXN4Q92575 508 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 CLUAP1Q96AJ1 413 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 TRIM47Q96LD4 638 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 NBPF4Q96M43 638 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 MTA3Q9BTC8 594 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 JADE2Q9NQC1 790 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 UNC13AQ9UPW8 1703 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 FAM181BA6NEQ2 426 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 J3QL48 77 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 ZSCAN20P17040 1043 aaPredicted RBP3.85□□□□□ -1.79
CBWD3-209ENST00000614377 SATB1Q01826 763 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 RBM26Q5T8P6 1007 aaKnown RBP3.85□□□□□ -1.79
CBWD3-209ENST00000614377 MPNDQ8N594 471 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 RDH13Q8NBN7 331 aa3.85□□□□□ -1.79
CBWD3-209ENST00000614377 TESPA1A2RU30 521 aaPredicted RBP3.84□□□□□ -1.79
CBWD3-209ENST00000614377 EXOC5O00471 708 aa3.84□□□□□ -1.79
CBWD3-209ENST00000614377 LCE3BQ5TA77 95 aa3.84□□□□□ -1.79
CBWD3-209ENST00000614377 KRBA2Q6ZNG9 492 aa3.84□□□□□ -1.79
CBWD3-209ENST00000614377 GTPBP4Q9BZE4 634 aaKnown RBP3.84□□□□□ -1.79
CBWD3-209ENST00000614377 SENP2Q9HC62 589 aa3.84□□□□□ -1.79
CBWD3-209ENST00000614377 ZHX1Q9UKY1 873 aaPredicted RBP3.84□□□□□ -1.79
CBWD3-209ENST00000614377 CFAP65Q6ZU64 1925 aaKnown RBP3.84□□□□□ -1.79
CBWD3-209ENST00000614377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.84□□□□□ -1.79
CBWD3-209ENST00000614377 LETM1O95202 739 aaPredicted RBP3.84□□□□□ -1.79
CBWD3-209ENST00000614377 VEGFBP49765 207 aa3.84□□□□□ -1.79
CBWD3-209ENST00000614377 FUT2Q10981 343 aa3.84□□□□□ -1.79
CBWD3-209ENST00000614377 CACTIN-AS1Q8N1I8 211 aa3.84□□□□□ -1.79
CBWD3-209ENST00000614377 PSMG3-AS1Q96PY0 264 aa3.84□□□□□ -1.79
CBWD3-209ENST00000614377 NUB1Q9Y5A7 615 aa3.84□□□□□ -1.79
CBWD3-209ENST00000614377 GOLGA6L3A6NEY3 463 aa3.84□□□□□ -1.8
CBWD3-209ENST00000614377 DDX46Q7L014 1031 aaKnown RBP3.84□□□□□ -1.8
CBWD3-209ENST00000614377 FAM160A2Q8N612 972 aaPredicted RBP3.84□□□□□ -1.8
CBWD3-209ENST00000614377 HPS1Q92902 700 aa3.84□□□□□ -1.8
CBWD3-209ENST00000614377 SIRT1Q96EB6 747 aa3.84□□□□□ -1.8
CBWD3-209ENST00000614377 FEZ2Q9UHY8 353 aaPredicted RBP3.84□□□□□ -1.8
CBWD3-209ENST00000614377 ZNF777Q9ULD5 760 aaPredicted RBP3.84□□□□□ -1.8
CBWD3-209ENST00000614377 GOLIM4O00461 696 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 ZRANB2O95218 330 aaKnown RBP eCLIP3.83□□□□□ -1.8
CBWD3-209ENST00000614377 GMPRP36959 345 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 RGL3Q3MIN7 710 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 SND1Q7KZF4 910 aaKnown RBP eCLIP3.83□□□□□ -1.8
CBWD3-209ENST00000614377 PROSER2Q86WR7 435 aaPredicted RBP3.83□□□□□ -1.8
CBWD3-209ENST00000614377 SNIP1Q8TAD8 396 aaKnown RBP3.83□□□□□ -1.8
CBWD3-209ENST00000614377 RNF217Q8TC41 542 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 DCAF11Q8TEB1 546 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 MRGPRX2Q96LB1 330 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 FMNL1O95466 1100 aaPredicted RBP3.83□□□□□ -1.8
CBWD3-209ENST00000614377 FECHP22830 423 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 TERF1P54274 439 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 UVSSAQ2YD98 709 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 MORN1Q5T089 497 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 ZSCAN1Q8NBB4 408 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 SLC16A10Q8TF71 515 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 NLRP7Q8WX94 980 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 IPO9Q96P70 1041 aaKnown RBP3.83□□□□□ -1.8
CBWD3-209ENST00000614377 SLC27A5Q9Y2P5 690 aa3.83□□□□□ -1.8
CBWD3-209ENST00000614377 WNT7AO00755 349 aa3.82□□□□□ -1.8
CBWD3-209ENST00000614377 SCP2P22307 547 aa3.82□□□□□ -1.8
CBWD3-209ENST00000614377 TRIM32Q13049 653 aa3.82□□□□□ -1.8
CBWD3-209ENST00000614377 MSL3Q8N5Y2 521 aaKnown RBP3.82□□□□□ -1.8
CBWD3-209ENST00000614377 THAP11Q96EK4 314 aa3.82□□□□□ -1.8
CBWD3-209ENST00000614377 DDX11L8A8MPP1 907 aa3.82□□□□□ -1.8
CBWD3-209ENST00000614377 HDAC1Q13547 482 aaPredicted RBP3.82□□□□□ -1.8
CBWD3-209ENST00000614377 SF3A1Q15459 793 aaKnown RBP3.82□□□□□ -1.8
CBWD3-209ENST00000614377 PXYLP1Q8TE99 480 aa3.82□□□□□ -1.8
CBWD3-209ENST00000614377 ITFG2Q969R8 447 aa3.82□□□□□ -1.8
CBWD3-209ENST00000614377 BMP1P13497 986 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 SSFA2P28290 1259 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 RNF19BQ6ZMZ0 732 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 RAB11FIP3O75154 756 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 DNTTIP2Q5QJE6 756 aaKnown RBP3.81□□□□□ -1.8
CBWD3-209ENST00000614377 ARMCX6Q7L4S7 300 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 BANK1Q8NDB2 785 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 KIFC2Q96AC6 838 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 EVI5LQ96CN4 794 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 CCDC85AQ96PX6 553 aaPredicted RBP3.81□□□□□ -1.8
CBWD3-209ENST00000614377 PNNQ9H307 717 aaKnown RBP3.81□□□□□ -1.8
CBWD3-209ENST00000614377 GOLGA6CA6NDK9 693 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 GOLGA6BA6NDN3 693 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 CCER2I3L3R5 266 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 COQ9O75208 318 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 PPFIA4O75335 1185 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 FCHSD2O94868 740 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 GOLGA6DP0CG33 693 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 ATP6V1AP38606 617 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 FNBP4Q8N3X1 1017 aaPredicted RBP3.81□□□□□ -1.8
CBWD3-209ENST00000614377 CXorf38Q8TB03 319 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 SNRNP27Q8WVK2 155 aaKnown RBP3.81□□□□□ -1.8
CBWD3-209ENST00000614377 MAF1Q9H063 256 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 GOLGA6AQ9NYA3 693 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 STK26Q9P289 416 aa3.81□□□□□ -1.8
CBWD3-209ENST00000614377 CREB3O43889 395 aa3.8□□□□□ -1.8
CBWD3-209ENST00000614377 CSPP1Q1MSJ5 1256 aa3.8□□□□□ -1.8
CBWD3-209ENST00000614377 ZC3H12AQ5D1E8 599 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms