RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 SULT6B1Q6IMI4 303 aa17.22■□□□□ 0.35
CCL4-201ENST00000613947 MARCH10Q8NA82 808 aaPredicted RBP17.22■□□□□ 0.35
CCL4-201ENST00000613947 MYBBP1AQ9BQG0 1328 aaKnown RBP17.22■□□□□ 0.35
CCL4-201ENST00000613947 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
CCL4-201ENST00000613947 OVOS2A0A0G2JMS6 1433 aa17.21■□□□□ 0.34
CCL4-201ENST00000613947 TNS2Q63HR2 1409 aa17.21■□□□□ 0.34
CCL4-201ENST00000613947 ZCRB1Q8TBF4 217 aaKnown RBP17.2■□□□□ 0.34
CCL4-201ENST00000613947 RGPD1P0DJD0 1748 aa17.2■□□□□ 0.34
CCL4-201ENST00000613947 U2SURPO15042 1029 aaKnown RBP17.2■□□□□ 0.34
CCL4-201ENST00000613947 HMOX1P09601 288 aa17.19■□□□□ 0.34
CCL4-201ENST00000613947 FAM196AQ6ZSG2 479 aa17.19■□□□□ 0.34
CCL4-201ENST00000613947 DDX54Q8TDD1 881 aaKnown RBP17.19■□□□□ 0.34
CCL4-201ENST00000613947 KDRP35968 1356 aa17.18■□□□□ 0.34
CCL4-201ENST00000613947 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCL4-201ENST00000613947 ANP32EQ9BTT0 268 aa17.17■□□□□ 0.34
CCL4-201ENST00000613947 NUDCQ9Y266 331 aa17.17■□□□□ 0.34
CCL4-201ENST00000613947 ANP32CO43423 234 aa17.16■□□□□ 0.34
CCL4-201ENST00000613947 KAT6BQ8WYB5 2073 aa17.15■□□□□ 0.34
CCL4-201ENST00000613947 U2AF1L5P0DN76 240 aaPredicted RBP17.15■□□□□ 0.34
CCL4-201ENST00000613947 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCL4-201ENST00000613947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCL4-201ENST00000613947 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
CCL4-201ENST00000613947 CYP27B1O15528 508 aa17.14■□□□□ 0.33
CCL4-201ENST00000613947 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
CCL4-201ENST00000613947 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
CCL4-201ENST00000613947 TRIM37O94972 964 aa17.13■□□□□ 0.33
CCL4-201ENST00000613947 SHANK3Q9BYB0 1731 aa17.13■□□□□ 0.33
CCL4-201ENST00000613947 PLEKHO1Q53GL0 409 aaPredicted RBP17.12■□□□□ 0.33
CCL4-201ENST00000613947 BCL9O00512 1426 aa17.12■□□□□ 0.33
CCL4-201ENST00000613947 PKD1L3Q7Z443 1732 aa17.11■□□□□ 0.33
CCL4-201ENST00000613947 AMOTQ4VCS5 1084 aa17.11■□□□□ 0.33
CCL4-201ENST00000613947 ACSBG1Q96GR2 724 aa17.11■□□□□ 0.33
CCL4-201ENST00000613947 PLEKHG2Q9H7P9 1386 aa17.1■□□□□ 0.33
CCL4-201ENST00000613947 PTF1AQ7RTS3 328 aa17.1■□□□□ 0.33
CCL4-201ENST00000613947 CCDC125Q86Z20 511 aa17.1■□□□□ 0.33
CCL4-201ENST00000613947 RSPH6AQ9H0K4 717 aa17.1■□□□□ 0.33
CCL4-201ENST00000613947 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
CCL4-201ENST00000613947 KCNQ2O43526 872 aa17.1■□□□□ 0.33
CCL4-201ENST00000613947 FCHSD2O94868 740 aa17.09■□□□□ 0.33
CCL4-201ENST00000613947 PHKG2P15735 406 aa17.09■□□□□ 0.33
CCL4-201ENST00000613947 PRKAR2BP31323 418 aa17.09■□□□□ 0.33
CCL4-201ENST00000613947 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
CCL4-201ENST00000613947 ZNF530Q6P9A1 599 aaPredicted RBP17.09■□□□□ 0.33
CCL4-201ENST00000613947 IFNL2Q8IZJ0 200 aa17.09■□□□□ 0.33
CCL4-201ENST00000613947 PHACTR3Q96KR7 559 aa17.08■□□□□ 0.33
CCL4-201ENST00000613947 SBF2Q86WG5 1849 aa17.08■□□□□ 0.32
CCL4-201ENST00000613947 SF3B2Q13435 895 aaKnown RBP17.07■□□□□ 0.32
CCL4-201ENST00000613947 NKX1-1Q15270 411 aaPredicted RBP17.07■□□□□ 0.32
CCL4-201ENST00000613947 MTHFSDQ2M296 383 aaKnown RBP17.07■□□□□ 0.32
CCL4-201ENST00000613947 BCL11BQ9C0K0 894 aaPredicted RBP17.07■□□□□ 0.32
CCL4-201ENST00000613947 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
CCL4-201ENST00000613947 DEFB132Q7Z7B7 95 aa17.06■□□□□ 0.32
CCL4-201ENST00000613947 APBA3O96018 575 aa17.05■□□□□ 0.32
CCL4-201ENST00000613947 C1orf141Q5JVX7 400 aa17.05■□□□□ 0.32
CCL4-201ENST00000613947 SYTL4Q96C24 671 aaPredicted RBP17.05■□□□□ 0.32
CCL4-201ENST00000613947 WDR43Q15061 677 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCL4-201ENST00000613947 AKAP4Q5JQC9 854 aa17.03■□□□□ 0.32
CCL4-201ENST00000613947 MPRIPQ6WCQ1 1025 aa17.03■□□□□ 0.32
CCL4-201ENST00000613947 PLEKHF1Q96S99 279 aa17.03■□□□□ 0.32
CCL4-201ENST00000613947 ADAMTS8Q9UP79 889 aa17.03■□□□□ 0.32
CCL4-201ENST00000613947 TNS1Q9HBL0 1735 aaKnown RBP17.03■□□□□ 0.32
CCL4-201ENST00000613947 HSP90AB1P08238 724 aaKnown RBP17.02■□□□□ 0.32
CCL4-201ENST00000613947 BAG6P46379 1132 aa17.02■□□□□ 0.32
CCL4-201ENST00000613947 EN1Q05925 392 aaPredicted RBP17.02■□□□□ 0.32
CCL4-201ENST00000613947 DCAF5Q96JK2 942 aa17.02■□□□□ 0.32
CCL4-201ENST00000613947 MRS2Q9HD23 443 aa17.02■□□□□ 0.32
CCL4-201ENST00000613947 GAS2L2Q8NHY3 880 aa17.02■□□□□ 0.31
CCL4-201ENST00000613947 DOT1LQ8TEK3 1739 aa17.02■□□□□ 0.31
CCL4-201ENST00000613947 NHSQ6T4R5 1651 aa17.01■□□□□ 0.31
CCL4-201ENST00000613947 PNNQ9H307 717 aaKnown RBP17■□□□□ 0.31
CCL4-201ENST00000613947 KDM6AO15550 1401 aaPredicted RBP17■□□□□ 0.31
CCL4-201ENST00000613947 CAMKK2Q96RR4 588 aa17■□□□□ 0.31
CCL4-201ENST00000613947 LGR6Q9HBX8 967 aa17■□□□□ 0.31
CCL4-201ENST00000613947 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
CCL4-201ENST00000613947 PLSCR1O15162 318 aa16.99■□□□□ 0.31
CCL4-201ENST00000613947 NEFMP07197 916 aa16.99■□□□□ 0.31
CCL4-201ENST00000613947 EZH2Q15910 746 aaKnown RBP16.99■□□□□ 0.31
CCL4-201ENST00000613947 CCDC146Q8IYE0 955 aa16.99■□□□□ 0.31
CCL4-201ENST00000613947 PNISRQ8TF01 805 aaKnown RBP16.99■□□□□ 0.31
CCL4-201ENST00000613947 PIGBQ92521 554 aa16.99■□□□□ 0.31
CCL4-201ENST00000613947 GNAT3A8MTJ3 354 aa16.98■□□□□ 0.31
CCL4-201ENST00000613947 ERVV-2B6SEH9 535 aa16.98■□□□□ 0.31
CCL4-201ENST00000613947 BTAF1O14981 1849 aa16.98■□□□□ 0.31
CCL4-201ENST00000613947 MAPK8IP3Q9UPT6 1336 aa16.98■□□□□ 0.31
CCL4-201ENST00000613947 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
CCL4-201ENST00000613947 MAP3K5Q99683 1374 aa16.97■□□□□ 0.31
CCL4-201ENST00000613947 ITGB4P16144 1822 aa16.97■□□□□ 0.31
CCL4-201ENST00000613947 RNMTO43148 476 aaKnown RBP16.97■□□□□ 0.31
CCL4-201ENST00000613947 CABP4P57796 275 aa16.96■□□□□ 0.31
CCL4-201ENST00000613947 PROM2Q8N271 834 aa16.96■□□□□ 0.31
CCL4-201ENST00000613947 NFATC2IPQ8NCF5 419 aa16.96■□□□□ 0.31
CCL4-201ENST00000613947 IL17REQ8NFR9 667 aa16.96■□□□□ 0.31
CCL4-201ENST00000613947 NFE2L2Q16236 605 aa16.95■□□□□ 0.3
CCL4-201ENST00000613947 RUNDC1Q96C34 613 aa16.95■□□□□ 0.3
CCL4-201ENST00000613947 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
CCL4-201ENST00000613947 MCM10Q7L590 875 aa16.93■□□□□ 0.3
CCL4-201ENST00000613947 RTF1Q92541 710 aaKnown RBP16.93■□□□□ 0.3
CCL4-201ENST00000613947 SLC52A2Q9HAB3 445 aa16.93■□□□□ 0.3
CCL4-201ENST00000613947 ASAP1Q9ULH1 1129 aa16.93■□□□□ 0.3
CCL4-201ENST00000613947 DCTN1Q14203 1278 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms