RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 DOT1LQ8TEK3 1739 aa23.72■■□□□ 1.39
CCL3-204ENST00000613922 ZCRB1Q8TBF4 217 aaKnown RBP23.71■■□□□ 1.39
CCL3-204ENST00000613922 POLR3GLQ9BT43 218 aa23.71■■□□□ 1.39
CCL3-204ENST00000613922 EMILIN1Q9Y6C2 1016 aa23.71■■□□□ 1.39
CCL3-204ENST00000613922 PAPPAQ13219 1627 aa23.7■■□□□ 1.38
CCL3-204ENST00000613922 USHBP1Q8N6Y0 703 aa23.69■■□□□ 1.38
CCL3-204ENST00000613922 NCAPD2Q15021 1401 aa23.67■■□□□ 1.38
CCL3-204ENST00000613922 WASHC2AQ641Q2 1341 aa23.66■■□□□ 1.38
CCL3-204ENST00000613922 RAPGEF4Q8WZA2 1011 aa23.66■■□□□ 1.38
CCL3-204ENST00000613922 PANK3Q9H999 370 aa23.65■■□□□ 1.38
CCL3-204ENST00000613922 SPON1Q9HCB6 807 aa23.65■■□□□ 1.38
CCL3-204ENST00000613922 STK32BQ9NY57 414 aa23.65■■□□□ 1.38
CCL3-204ENST00000613922 LY75O60449 1722 aa23.64■■□□□ 1.38
CCL3-204ENST00000613922 PKD1L3Q7Z443 1732 aa23.64■■□□□ 1.38
CCL3-204ENST00000613922 TATP17735 454 aaPredicted RBP23.64■■□□□ 1.37
CCL3-204ENST00000613922 SLC15A2Q16348 729 aa23.64■■□□□ 1.37
CCL3-204ENST00000613922 POLKQ9UBT6 870 aa23.64■■□□□ 1.37
CCL3-204ENST00000613922 NSD2O96028 1365 aa23.64■■□□□ 1.37
CCL3-204ENST00000613922 PRIM1P49642 420 aaKnown RBP23.62■■□□□ 1.37
CCL3-204ENST00000613922 PPM1GO15355 546 aaPredicted RBP23.61■■□□□ 1.37
CCL3-204ENST00000613922 PDGFDQ9GZP0 370 aaPredicted RBP23.61■■□□□ 1.37
CCL3-204ENST00000613922 QSER1Q2KHR3 1735 aa23.6■■□□□ 1.37
CCL3-204ENST00000613922 LRRC4BQ9NT99 713 aa23.6■■□□□ 1.37
CCL3-204ENST00000613922 PCDH11XQ9BZA7 1347 aa23.59■■□□□ 1.37
CCL3-204ENST00000613922 PCDH11YQ9BZA8 1340 aa23.59■■□□□ 1.37
CCL3-204ENST00000613922 SLC27A3Q5K4L6 730 aa23.58■■□□□ 1.37
CCL3-204ENST00000613922 SYTL4Q96C24 671 aaPredicted RBP23.58■■□□□ 1.37
CCL3-204ENST00000613922 ITGB4P16144 1822 aa23.57■■□□□ 1.36
CCL3-204ENST00000613922 EYA1Q99502 592 aa23.57■■□□□ 1.36
CCL3-204ENST00000613922 TOGARAM1Q9Y4F4 1720 aa23.56■■□□□ 1.36
CCL3-204ENST00000613922 TUBGCP6Q96RT7 1819 aa23.56■■□□□ 1.36
CCL3-204ENST00000613922 CYP27B1O15528 508 aa23.55■■□□□ 1.36
CCL3-204ENST00000613922 TNNT2P45379 298 aaPredicted RBP23.55■■□□□ 1.36
CCL3-204ENST00000613922 ZNF827Q17R98 1081 aa23.55■■□□□ 1.36
CCL3-204ENST00000613922 ZBTB7AO95365 584 aa23.54■■□□□ 1.36
CCL3-204ENST00000613922 AKT1S1Q96B36 256 aa23.54■■□□□ 1.36
CCL3-204ENST00000613922 PPP1R1BQ9UD71 204 aaPredicted RBP23.54■■□□□ 1.36
CCL3-204ENST00000613922 EIF4A2Q14240 407 aaKnown RBP23.53■■□□□ 1.36
CCL3-204ENST00000613922 KIF7Q2M1P5 1343 aa23.53■■□□□ 1.36
CCL3-204ENST00000613922 PTGER2P43116 358 aa23.52■■□□□ 1.36
CCL3-204ENST00000613922 MTFR1LQ9H019 292 aa23.51■■□□□ 1.35
CCL3-204ENST00000613922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.51■■□□□ 1.35
CCL3-204ENST00000613922 PLEKHG2Q9H7P9 1386 aa23.51■■□□□ 1.35
CCL3-204ENST00000613922 NKX1-1Q15270 411 aaPredicted RBP23.5■■□□□ 1.35
CCL3-204ENST00000613922 SPG7Q9UQ90 795 aa23.5■■□□□ 1.35
CCL3-204ENST00000613922 ATF5Q9Y2D1 282 aaPredicted RBP23.5■■□□□ 1.35
CCL3-204ENST00000613922 KNSTRNQ9Y448 316 aa23.5■■□□□ 1.35
CCL3-204ENST00000613922 TAF1LQ8IZX4 1826 aa23.49■■□□□ 1.35
CCL3-204ENST00000613922 MORC1Q86VD1 984 aa23.49■■□□□ 1.35
CCL3-204ENST00000613922 COL24A1Q17RW2 1714 aa23.49■■□□□ 1.35
CCL3-204ENST00000613922 KCNQ4P56696 695 aa23.48■■□□□ 1.35
CCL3-204ENST00000613922 SGIP1Q9BQI5 828 aa23.48■■□□□ 1.35
CCL3-204ENST00000613922 IGSF1Q8N6C5 1336 aa23.48■■□□□ 1.35
CCL3-204ENST00000613922 AMER1Q5JTC6 1135 aaPredicted RBP23.47■■□□□ 1.35
CCL3-204ENST00000613922 CCNL1Q9UK58 526 aaPredicted RBP23.47■■□□□ 1.35
CCL3-204ENST00000613922 C5P01031 1676 aa23.47■■□□□ 1.35
CCL3-204ENST00000613922 PNPLA7Q6ZV29 1317 aa23.44■■□□□ 1.34
CCL3-204ENST00000613922 MPRIPQ6WCQ1 1025 aa23.44■■□□□ 1.34
CCL3-204ENST00000613922 PALLDQ8WX93 1383 aa23.43■■□□□ 1.34
CCL3-204ENST00000613922 SLC16A10Q8TF71 515 aa23.43■■□□□ 1.34
CCL3-204ENST00000613922 PER1O15534 1290 aaPredicted RBP23.42■■□□□ 1.34
CCL3-204ENST00000613922 PHKG2P15735 406 aa23.42■■□□□ 1.34
CCL3-204ENST00000613922 IFNL2Q8IZJ0 200 aa23.42■■□□□ 1.34
CCL3-204ENST00000613922 TFCP2L1Q9NZI6 479 aa23.42■■□□□ 1.34
CCL3-204ENST00000613922 PIGBQ92521 554 aa23.41■■□□□ 1.34
CCL3-204ENST00000613922 SMARCC1Q92922 1105 aaPredicted RBP23.4■■□□□ 1.34
CCL3-204ENST00000613922 HMGB2P26583 209 aaKnown RBP23.39■■□□□ 1.33
CCL3-204ENST00000613922 C4BP0C0L5 1744 aa23.37■■□□□ 1.33
CCL3-204ENST00000613922 ARXQ96QS3 562 aa23.37■■□□□ 1.33
CCL3-204ENST00000613922 IL13P35225 146 aa23.36■■□□□ 1.33
CCL3-204ENST00000613922 FHDC1Q9C0D6 1143 aaPredicted RBP23.36■■□□□ 1.33
CCL3-204ENST00000613922 MAP3K5Q99683 1374 aa23.36■■□□□ 1.33
CCL3-204ENST00000613922 UBR3Q6ZT12 1888 aa23.35■■□□□ 1.33
CCL3-204ENST00000613922 PLEKHO1Q53GL0 409 aaPredicted RBP23.35■■□□□ 1.33
CCL3-204ENST00000613922 SYT17Q9BSW7 474 aa23.35■■□□□ 1.33
CCL3-204ENST00000613922 TMOD3Q9NYL9 352 aa23.35■■□□□ 1.33
CCL3-204ENST00000613922 KDRP35968 1356 aa23.35■■□□□ 1.33
CCL3-204ENST00000613922 AMOTQ4VCS5 1084 aa23.34■■□□□ 1.33
CCL3-204ENST00000613922 AEBP1Q8IUX7 1158 aa23.34■■□□□ 1.33
CCL3-204ENST00000613922 NPC1L1Q9UHC9 1359 aa23.34■■□□□ 1.33
CCL3-204ENST00000613922 COL23A1Q86Y22 540 aaPredicted RBP23.33■■□□□ 1.33
CCL3-204ENST00000613922 HSP90AB1P08238 724 aaKnown RBP23.32■■□□□ 1.32
CCL3-204ENST00000613922 LOC102724428A0A0B4J2F2 783 aa23.31■■□□□ 1.32
CCL3-204ENST00000613922 DCAF8L1A6NGE4 600 aa23.31■■□□□ 1.32
CCL3-204ENST00000613922 POLD1P28340 1107 aa23.31■■□□□ 1.32
CCL3-204ENST00000613922 MTHFSP49914 203 aa23.31■■□□□ 1.32
CCL3-204ENST00000613922 SIK1P57059 783 aa23.31■■□□□ 1.32
CCL3-204ENST00000613922 SULT6B1Q6IMI4 303 aa23.31■■□□□ 1.32
CCL3-204ENST00000613922 DCAF5Q96JK2 942 aa23.31■■□□□ 1.32
CCL3-204ENST00000613922 ASAP1Q9ULH1 1129 aa23.31■■□□□ 1.32
CCL3-204ENST00000613922 ZNF831Q5JPB2 1677 aa23.31■■□□□ 1.32
CCL3-204ENST00000613922 ERVV-2B6SEH9 535 aa23.3■■□□□ 1.32
CCL3-204ENST00000613922 CC2D1BQ5T0F9 858 aaKnown RBP23.3■■□□□ 1.32
CCL3-204ENST00000613922 ZNF530Q6P9A1 599 aaPredicted RBP23.3■■□□□ 1.32
CCL3-204ENST00000613922 KDM6AO15550 1401 aaPredicted RBP23.3■■□□□ 1.32
CCL3-204ENST00000613922 FLAD1Q8NFF5 587 aa23.29■■□□□ 1.32
CCL3-204ENST00000613922 ATG3Q9NT62 314 aa23.29■■□□□ 1.32
CCL3-204ENST00000613922 SCN11AQ9UI33 1791 aa23.29■■□□□ 1.32
CCL3-204ENST00000613922 VIRMAQ69YN4 1812 aaKnown RBP23.28■■□□□ 1.32
CCL3-204ENST00000613922 MSH5O43196 834 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms