RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 ZCRB1Q8TBF4 217 aaKnown RBP31.37■■■□□ 2.61
FAM228B-208ENST00000613899 EMILIN1Q9Y6C2 1016 aa31.37■■■□□ 2.61
FAM228B-208ENST00000613899 MAP2P11137 1827 aaKnown RBP31.37■■■□□ 2.61
FAM228B-208ENST00000613899 RAPGEF4Q8WZA2 1011 aa31.36■■■□□ 2.61
FAM228B-208ENST00000613899 CASZ1Q86V15 1759 aa31.35■■■□□ 2.61
FAM228B-208ENST00000613899 USHBP1Q8N6Y0 703 aa31.35■■■□□ 2.61
FAM228B-208ENST00000613899 STK32BQ9NY57 414 aa31.33■■■□□ 2.61
FAM228B-208ENST00000613899 TATP17735 454 aaPredicted RBP31.32■■■□□ 2.6
FAM228B-208ENST00000613899 PAPPAQ13219 1627 aa31.31■■■□□ 2.6
FAM228B-208ENST00000613899 PPM1GO15355 546 aaPredicted RBP31.31■■■□□ 2.6
FAM228B-208ENST00000613899 SPON1Q9HCB6 807 aa31.31■■■□□ 2.6
FAM228B-208ENST00000613899 WASHC2AQ641Q2 1341 aa31.28■■■□□ 2.6
FAM228B-208ENST00000613899 SLC15A2Q16348 729 aa31.28■■■□□ 2.6
FAM228B-208ENST00000613899 PANK3Q9H999 370 aa31.28■■■□□ 2.6
FAM228B-208ENST00000613899 NSD2O96028 1365 aa31.28■■■□□ 2.6
FAM228B-208ENST00000613899 NCAPD2Q15021 1401 aa31.27■■■□□ 2.6
FAM228B-208ENST00000613899 SYTL4Q96C24 671 aaPredicted RBP31.27■■■□□ 2.6
FAM228B-208ENST00000613899 PCDH11XQ9BZA7 1347 aa31.26■■■□□ 2.6
FAM228B-208ENST00000613899 PCDH11YQ9BZA8 1340 aa31.26■■■□□ 2.6
FAM228B-208ENST00000613899 PKD1L3Q7Z443 1732 aa31.26■■■□□ 2.59
FAM228B-208ENST00000613899 PRIM1P49642 420 aaKnown RBP31.24■■■□□ 2.59
FAM228B-208ENST00000613899 POLKQ9UBT6 870 aa31.24■■■□□ 2.59
FAM228B-208ENST00000613899 LY75O60449 1722 aa31.22■■■□□ 2.59
FAM228B-208ENST00000613899 SLC27A3Q5K4L6 730 aa31.22■■■□□ 2.59
FAM228B-208ENST00000613899 PPP1R1BQ9UD71 204 aaPredicted RBP31.22■■■□□ 2.59
FAM228B-208ENST00000613899 TNNT2P45379 298 aaPredicted RBP31.2■■■□□ 2.59
FAM228B-208ENST00000613899 PDGFDQ9GZP0 370 aaPredicted RBP31.18■■■□□ 2.58
FAM228B-208ENST00000613899 LRRC4BQ9NT99 713 aa31.18■■■□□ 2.58
FAM228B-208ENST00000613899 EYA1Q99502 592 aa31.16■■■□□ 2.58
FAM228B-208ENST00000613899 QSER1Q2KHR3 1735 aa31.15■■■□□ 2.58
FAM228B-208ENST00000613899 ZBTB7AO95365 584 aa31.15■■■□□ 2.58
FAM228B-208ENST00000613899 KNSTRNQ9Y448 316 aa31.15■■■□□ 2.58
FAM228B-208ENST00000613899 KIF7Q2M1P5 1343 aa31.14■■■□□ 2.58
FAM228B-208ENST00000613899 TOGARAM1Q9Y4F4 1720 aa31.13■■■□□ 2.57
FAM228B-208ENST00000613899 CYP27B1O15528 508 aa31.13■■■□□ 2.57
FAM228B-208ENST00000613899 EIF4A2Q14240 407 aaKnown RBP31.13■■■□□ 2.57
FAM228B-208ENST00000613899 ZNF827Q17R98 1081 aa31.13■■■□□ 2.57
FAM228B-208ENST00000613899 SPG7Q9UQ90 795 aa31.13■■■□□ 2.57
FAM228B-208ENST00000613899 MORC1Q86VD1 984 aa31.12■■■□□ 2.57
FAM228B-208ENST00000613899 MTFR1LQ9H019 292 aa31.12■■■□□ 2.57
FAM228B-208ENST00000613899 PLEKHG2Q9H7P9 1386 aa31.12■■■□□ 2.57
FAM228B-208ENST00000613899 ITGB4P16144 1822 aa31.1■■■□□ 2.57
FAM228B-208ENST00000613899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.1■■■□□ 2.57
FAM228B-208ENST00000613899 AKT1S1Q96B36 256 aa31.09■■■□□ 2.57
FAM228B-208ENST00000613899 CCNL1Q9UK58 526 aaPredicted RBP31.08■■■□□ 2.57
FAM228B-208ENST00000613899 ATF5Q9Y2D1 282 aaPredicted RBP31.08■■■□□ 2.57
FAM228B-208ENST00000613899 TUBGCP6Q96RT7 1819 aa31.08■■■□□ 2.57
FAM228B-208ENST00000613899 IGSF1Q8N6C5 1336 aa31.07■■■□□ 2.56
FAM228B-208ENST00000613899 PTGER2P43116 358 aa31.07■■■□□ 2.56
FAM228B-208ENST00000613899 NKX1-1Q15270 411 aaPredicted RBP31.05■■■□□ 2.56
FAM228B-208ENST00000613899 KCNQ4P56696 695 aa31.04■■■□□ 2.56
FAM228B-208ENST00000613899 MPRIPQ6WCQ1 1025 aa31.04■■■□□ 2.56
FAM228B-208ENST00000613899 C5P01031 1676 aa31.03■■■□□ 2.56
FAM228B-208ENST00000613899 PALLDQ8WX93 1383 aa31.03■■■□□ 2.56
FAM228B-208ENST00000613899 HMGB2P26583 209 aaKnown RBP31.02■■■□□ 2.56
FAM228B-208ENST00000613899 AMER1Q5JTC6 1135 aaPredicted RBP31.02■■■□□ 2.56
FAM228B-208ENST00000613899 TFCP2L1Q9NZI6 479 aa31.02■■■□□ 2.56
FAM228B-208ENST00000613899 PNPLA7Q6ZV29 1317 aa31■■■□□ 2.55
FAM228B-208ENST00000613899 IFNL2Q8IZJ0 200 aa31■■■□□ 2.55
FAM228B-208ENST00000613899 SLC16A10Q8TF71 515 aa31■■■□□ 2.55
FAM228B-208ENST00000613899 SGIP1Q9BQI5 828 aa31■■■□□ 2.55
FAM228B-208ENST00000613899 TAF1LQ8IZX4 1826 aa30.99■■■□□ 2.55
FAM228B-208ENST00000613899 SMARCC1Q92922 1105 aaPredicted RBP30.99■■■□□ 2.55
FAM228B-208ENST00000613899 PHKG2P15735 406 aa30.98■■■□□ 2.55
FAM228B-208ENST00000613899 DCAF8L1A6NGE4 600 aa30.96■■■□□ 2.55
FAM228B-208ENST00000613899 COL24A1Q17RW2 1714 aa30.95■■■□□ 2.55
FAM228B-208ENST00000613899 PIGBQ92521 554 aa30.95■■■□□ 2.55
FAM228B-208ENST00000613899 TMOD3Q9NYL9 352 aa30.94■■■□□ 2.54
FAM228B-208ENST00000613899 PER1O15534 1290 aaPredicted RBP30.92■■■□□ 2.54
FAM228B-208ENST00000613899 ARXQ96QS3 562 aa30.92■■■□□ 2.54
FAM228B-208ENST00000613899 FHDC1Q9C0D6 1143 aaPredicted RBP30.92■■■□□ 2.54
FAM228B-208ENST00000613899 C4BP0C0L5 1744 aa30.91■■■□□ 2.54
FAM228B-208ENST00000613899 PLEKHO1Q53GL0 409 aaPredicted RBP30.91■■■□□ 2.54
FAM228B-208ENST00000613899 HSP90AB1P08238 724 aaKnown RBP30.9■■■□□ 2.54
FAM228B-208ENST00000613899 AMOTQ4VCS5 1084 aa30.9■■■□□ 2.54
FAM228B-208ENST00000613899 POLD1P28340 1107 aa30.89■■■□□ 2.54
FAM228B-208ENST00000613899 KDRP35968 1356 aa30.89■■■□□ 2.54
FAM228B-208ENST00000613899 MAP3K5Q99683 1374 aa30.89■■■□□ 2.54
FAM228B-208ENST00000613899 SYT17Q9BSW7 474 aa30.88■■■□□ 2.53
FAM228B-208ENST00000613899 IL13P35225 146 aa30.87■■■□□ 2.53
FAM228B-208ENST00000613899 AEBP1Q8IUX7 1158 aa30.87■■■□□ 2.53
FAM228B-208ENST00000613899 NPC1L1Q9UHC9 1359 aa30.87■■■□□ 2.53
FAM228B-208ENST00000613899 CC2D1BQ5T0F9 858 aaKnown RBP30.86■■■□□ 2.53
FAM228B-208ENST00000613899 ZNF530Q6P9A1 599 aaPredicted RBP30.86■■■□□ 2.53
FAM228B-208ENST00000613899 DCAF5Q96JK2 942 aa30.86■■■□□ 2.53
FAM228B-208ENST00000613899 MSH5O43196 834 aa30.85■■■□□ 2.53
FAM228B-208ENST00000613899 MTHFSP49914 203 aa30.85■■■□□ 2.53
FAM228B-208ENST00000613899 SULT6B1Q6IMI4 303 aa30.85■■■□□ 2.53
FAM228B-208ENST00000613899 FLAD1Q8NFF5 587 aa30.85■■■□□ 2.53
FAM228B-208ENST00000613899 LOC102724428A0A0B4J2F2 783 aa30.84■■■□□ 2.53
FAM228B-208ENST00000613899 ERVV-2B6SEH9 535 aa30.84■■■□□ 2.53
FAM228B-208ENST00000613899 SIK1P57059 783 aa30.84■■■□□ 2.53
FAM228B-208ENST00000613899 COL23A1Q86Y22 540 aaPredicted RBP30.84■■■□□ 2.53
FAM228B-208ENST00000613899 AK7Q96M32 723 aa30.83■■■□□ 2.53
FAM228B-208ENST00000613899 UBR3Q6ZT12 1888 aa30.82■■■□□ 2.53
FAM228B-208ENST00000613899 C1orf141Q5JVX7 400 aa30.82■■■□□ 2.52
FAM228B-208ENST00000613899 ASAP1Q9ULH1 1129 aa30.82■■■□□ 2.52
FAM228B-208ENST00000613899 KDM6AO15550 1401 aaPredicted RBP30.81■■■□□ 2.52
FAM228B-208ENST00000613899 ZNF831Q5JPB2 1677 aa30.79■■■□□ 2.52
FAM228B-208ENST00000613899 ATG3Q9NT62 314 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms