RNA–Protein interactions for RNA: ENST00000613452.1

LINC01138-204, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-204ENST00000613452 PDGFDQ9GZP0 370 aaPredicted RBP13.33□□□□□ -0.28
LINC01138-204ENST00000613452 LRRC4BQ9NT99 713 aa13.33□□□□□ -0.28
LINC01138-204ENST00000613452 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
LINC01138-204ENST00000613452 LTN1O94822 1766 aa13.32□□□□□ -0.28
LINC01138-204ENST00000613452 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
LINC01138-204ENST00000613452 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
LINC01138-204ENST00000613452 SMG6Q86US8 1419 aaKnown RBP13.31□□□□□ -0.28
LINC01138-204ENST00000613452 WASHC2AQ641Q2 1341 aa13.31□□□□□ -0.28
LINC01138-204ENST00000613452 FLT4P35916 1363 aa13.31□□□□□ -0.28
LINC01138-204ENST00000613452 SYTL4Q96C24 671 aaPredicted RBP13.3□□□□□ -0.28
LINC01138-204ENST00000613452 SYT17Q9BSW7 474 aa13.3□□□□□ -0.28
LINC01138-204ENST00000613452 NHSQ6T4R5 1651 aa13.3□□□□□ -0.28
LINC01138-204ENST00000613452 FAM208AQ9UK61 1670 aaKnown RBP13.29□□□□□ -0.28
LINC01138-204ENST00000613452 EIF4G2P78344 907 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC01138-204ENST00000613452 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC01138-204ENST00000613452 NSD2O96028 1365 aa13.29□□□□□ -0.28
LINC01138-204ENST00000613452 YY1P25490 414 aa13.28□□□□□ -0.28
LINC01138-204ENST00000613452 NKX1-1Q15270 411 aaPredicted RBP13.28□□□□□ -0.28
LINC01138-204ENST00000613452 ZNF827Q17R98 1081 aa13.28□□□□□ -0.28
LINC01138-204ENST00000613452 ARXQ96QS3 562 aa13.28□□□□□ -0.28
LINC01138-204ENST00000613452 TFCP2L1Q9NZI6 479 aa13.27□□□□□ -0.29
LINC01138-204ENST00000613452 PCDH11XQ9BZA7 1347 aa13.27□□□□□ -0.29
LINC01138-204ENST00000613452 PCDH11YQ9BZA8 1340 aa13.27□□□□□ -0.29
LINC01138-204ENST00000613452 CASZ1Q86V15 1759 aa13.27□□□□□ -0.29
LINC01138-204ENST00000613452 USHBP1Q8N6Y0 703 aa13.26□□□□□ -0.29
LINC01138-204ENST00000613452 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
LINC01138-204ENST00000613452 MAP3K5Q99683 1374 aa13.26□□□□□ -0.29
LINC01138-204ENST00000613452 NSD3Q9BZ95 1437 aa13.26□□□□□ -0.29
LINC01138-204ENST00000613452 FHDC1Q9C0D6 1143 aaPredicted RBP13.26□□□□□ -0.29
LINC01138-204ENST00000613452 POLKQ9UBT6 870 aa13.26□□□□□ -0.29
LINC01138-204ENST00000613452 CCNL1Q9UK58 526 aaPredicted RBP13.26□□□□□ -0.29
LINC01138-204ENST00000613452 SPG7Q9UQ90 795 aa13.26□□□□□ -0.29
LINC01138-204ENST00000613452 EMILIN1Q9Y6C2 1016 aa13.26□□□□□ -0.29
LINC01138-204ENST00000613452 MEGF6O75095 1541 aa13.25□□□□□ -0.29
LINC01138-204ENST00000613452 CYP27B1O15528 508 aa13.25□□□□□ -0.29
LINC01138-204ENST00000613452 POLD1P28340 1107 aa13.25□□□□□ -0.29
LINC01138-204ENST00000613452 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
LINC01138-204ENST00000613452 PPM1GO15355 546 aaPredicted RBP13.24□□□□□ -0.29
LINC01138-204ENST00000613452 EYA1Q99502 592 aa13.24□□□□□ -0.29
LINC01138-204ENST00000613452 PLEKHG2Q9H7P9 1386 aa13.23□□□□□ -0.29
LINC01138-204ENST00000613452 PNPLA7Q6ZV29 1317 aa13.23□□□□□ -0.29
LINC01138-204ENST00000613452 HSPA5P11021 654 aaKnown RBP13.23□□□□□ -0.29
LINC01138-204ENST00000613452 PANK3Q9H999 370 aa13.23□□□□□ -0.29
LINC01138-204ENST00000613452 KAT6BQ8WYB5 2073 aa13.23□□□□□ -0.29
LINC01138-204ENST00000613452 BTAF1O14981 1849 aa13.23□□□□□ -0.29
LINC01138-204ENST00000613452 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
LINC01138-204ENST00000613452 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
LINC01138-204ENST00000613452 CCER1Q8TC90 406 aaPredicted RBP13.22□□□□□ -0.29
LINC01138-204ENST00000613452 PAPPAQ13219 1627 aa13.21□□□□□ -0.29
LINC01138-204ENST00000613452 KCNQ4P56696 695 aa13.21□□□□□ -0.29
LINC01138-204ENST00000613452 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
LINC01138-204ENST00000613452 COL23A1Q86Y22 540 aaPredicted RBP13.2□□□□□ -0.3
LINC01138-204ENST00000613452 PIGBQ92521 554 aa13.2□□□□□ -0.3
LINC01138-204ENST00000613452 POLR3GLQ9BT43 218 aa13.2□□□□□ -0.3
LINC01138-204ENST00000613452 EIF4A2Q14240 407 aaKnown RBP13.19□□□□□ -0.3
LINC01138-204ENST00000613452 HSP90AB1P08238 724 aaKnown RBP13.18□□□□□ -0.3
LINC01138-204ENST00000613452 PHKG2P15735 406 aa13.18□□□□□ -0.3
LINC01138-204ENST00000613452 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
LINC01138-204ENST00000613452 RGPD2P0DJD1 1756 aa13.17□□□□□ -0.3
LINC01138-204ENST00000613452 ERVV-2B6SEH9 535 aa13.17□□□□□ -0.3
LINC01138-204ENST00000613452 AMOTQ4VCS5 1084 aa13.17□□□□□ -0.3
LINC01138-204ENST00000613452 PLEKHO1Q53GL0 409 aaPredicted RBP13.17□□□□□ -0.3
LINC01138-204ENST00000613452 KNSTRNQ9Y448 316 aa13.17□□□□□ -0.3
LINC01138-204ENST00000613452 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
LINC01138-204ENST00000613452 GPR162Q16538 588 aa13.16□□□□□ -0.3
LINC01138-204ENST00000613452 MORC1Q86VD1 984 aa13.16□□□□□ -0.3
LINC01138-204ENST00000613452 TMOD3Q9NYL9 352 aa13.16□□□□□ -0.3
LINC01138-204ENST00000613452 CD2APQ9Y5K6 639 aa13.16□□□□□ -0.3
LINC01138-204ENST00000613452 LY75O60449 1722 aa13.16□□□□□ -0.3
LINC01138-204ENST00000613452 IGSF1Q8N6C5 1336 aa13.15□□□□□ -0.3
LINC01138-204ENST00000613452 LOC102724428A0A0B4J2F2 783 aa13.15□□□□□ -0.3
LINC01138-204ENST00000613452 TNNT2P45379 298 aaPredicted RBP13.15□□□□□ -0.3
LINC01138-204ENST00000613452 SIK1P57059 783 aa13.15□□□□□ -0.3
LINC01138-204ENST00000613452 DCAF5Q96JK2 942 aa13.15□□□□□ -0.3
LINC01138-204ENST00000613452 QSER1Q2KHR3 1735 aa13.15□□□□□ -0.3
LINC01138-204ENST00000613452 SHANK3Q9BYB0 1731 aa13.15□□□□□ -0.3
LINC01138-204ENST00000613452 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
LINC01138-204ENST00000613452 SSFA2P28290 1259 aa13.14□□□□□ -0.31
LINC01138-204ENST00000613452 AK7Q96M32 723 aa13.14□□□□□ -0.31
LINC01138-204ENST00000613452 MYOM1P52179 1685 aa13.14□□□□□ -0.31
LINC01138-204ENST00000613452 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
LINC01138-204ENST00000613452 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
LINC01138-204ENST00000613452 MAP2P11137 1827 aaKnown RBP13.12□□□□□ -0.31
LINC01138-204ENST00000613452 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
LINC01138-204ENST00000613452 RC3H1Q5TC82 1133 aaKnown RBP13.12□□□□□ -0.31
LINC01138-204ENST00000613452 ZNF784Q8NCA9 323 aaPredicted RBP13.12□□□□□ -0.31
LINC01138-204ENST00000613452 COL24A1Q17RW2 1714 aa13.12□□□□□ -0.31
LINC01138-204ENST00000613452 DOT1LQ8TEK3 1739 aa13.12□□□□□ -0.31
LINC01138-204ENST00000613452 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
LINC01138-204ENST00000613452 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
LINC01138-204ENST00000613452 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
LINC01138-204ENST00000613452 PER1O15534 1290 aaPredicted RBP13.1□□□□□ -0.31
LINC01138-204ENST00000613452 IL13P35225 146 aa13.1□□□□□ -0.31
LINC01138-204ENST00000613452 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
LINC01138-204ENST00000613452 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
LINC01138-204ENST00000613452 UTRNP46939 3433 aa13.1□□□□□ -0.31
LINC01138-204ENST00000613452 MTHFSP49914 203 aa13.09□□□□□ -0.31
LINC01138-204ENST00000613452 CABP4P57796 275 aa13.09□□□□□ -0.31
LINC01138-204ENST00000613452 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
LINC01138-204ENST00000613452 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms