RNA–Protein interactions for RNA: ENST00000613217.4

NCAM1-220, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-220ENST00000613217 ZNF827Q17R98 1081 aa17.26■□□□□ 0.35
NCAM1-220ENST00000613217 ZNF784Q8NCA9 323 aaPredicted RBP17.26■□□□□ 0.35
NCAM1-220ENST00000613217 LRRC4BQ9NT99 713 aa17.26■□□□□ 0.35
NCAM1-220ENST00000613217 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
NCAM1-220ENST00000613217 PRIM1P49642 420 aaKnown RBP17.25■□□□□ 0.35
NCAM1-220ENST00000613217 GPR162Q16538 588 aa17.25■□□□□ 0.35
NCAM1-220ENST00000613217 USP47Q96K76 1375 aa17.25■□□□□ 0.35
NCAM1-220ENST00000613217 QSER1Q2KHR3 1735 aa17.24■□□□□ 0.35
NCAM1-220ENST00000613217 FLAD1Q8NFF5 587 aa17.23■□□□□ 0.35
NCAM1-220ENST00000613217 CCNL1Q9UK58 526 aaPredicted RBP17.23■□□□□ 0.35
NCAM1-220ENST00000613217 TATP17735 454 aaPredicted RBP17.22■□□□□ 0.35
NCAM1-220ENST00000613217 PNPLA7Q6ZV29 1317 aa17.21■□□□□ 0.35
NCAM1-220ENST00000613217 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.35
NCAM1-220ENST00000613217 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.35
NCAM1-220ENST00000613217 CHD4Q14839 1912 aa17.21■□□□□ 0.35
NCAM1-220ENST00000613217 KLHL34Q8N239 644 aa17.21■□□□□ 0.35
NCAM1-220ENST00000613217 FYB1O15117 783 aa17.2■□□□□ 0.34
NCAM1-220ENST00000613217 GRIN3BO60391 1043 aa17.2■□□□□ 0.34
NCAM1-220ENST00000613217 INSRP06213 1382 aa17.19■□□□□ 0.34
NCAM1-220ENST00000613217 FLT4P35916 1363 aa17.19■□□□□ 0.34
NCAM1-220ENST00000613217 MEGF6O75095 1541 aa17.18■□□□□ 0.34
NCAM1-220ENST00000613217 MSH5O43196 834 aa17.18■□□□□ 0.34
NCAM1-220ENST00000613217 NBPF6Q5VWK0 638 aa17.18■□□□□ 0.34
NCAM1-220ENST00000613217 SMARCC1Q92922 1105 aaPredicted RBP17.18■□□□□ 0.34
NCAM1-220ENST00000613217 NBPF4Q96M43 638 aa17.18■□□□□ 0.34
NCAM1-220ENST00000613217 DOT1LQ8TEK3 1739 aa17.18■□□□□ 0.34
NCAM1-220ENST00000613217 NSD2O96028 1365 aa17.17■□□□□ 0.34
NCAM1-220ENST00000613217 LY75O60449 1722 aa17.17■□□□□ 0.34
NCAM1-220ENST00000613217 RRS1Q15050 365 aaKnown RBP17.17■□□□□ 0.34
NCAM1-220ENST00000613217 GGNBP2Q9H3C7 697 aa17.17■□□□□ 0.34
NCAM1-220ENST00000613217 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
NCAM1-220ENST00000613217 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
NCAM1-220ENST00000613217 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
NCAM1-220ENST00000613217 COL24A1Q17RW2 1714 aa17.15■□□□□ 0.34
NCAM1-220ENST00000613217 C1QTNF8P60827 252 aa17.14■□□□□ 0.33
NCAM1-220ENST00000613217 UTRNP46939 3433 aa17.14■□□□□ 0.33
NCAM1-220ENST00000613217 SPG7Q9UQ90 795 aa17.13■□□□□ 0.33
NCAM1-220ENST00000613217 GIGYF1O75420 1035 aaPredicted RBP17.12■□□□□ 0.33
NCAM1-220ENST00000613217 FBLN1P23142 703 aa17.12■□□□□ 0.33
NCAM1-220ENST00000613217 HSP90AB2PQ58FF8 381 aa17.12■□□□□ 0.33
NCAM1-220ENST00000613217 CD2APQ9Y5K6 639 aa17.12■□□□□ 0.33
NCAM1-220ENST00000613217 PALLDQ8WX93 1383 aa17.12■□□□□ 0.33
NCAM1-220ENST00000613217 SHANK3Q9BYB0 1731 aa17.11■□□□□ 0.33
NCAM1-220ENST00000613217 KCNQ4P56696 695 aa17.11■□□□□ 0.33
NCAM1-220ENST00000613217 COL23A1Q86Y22 540 aaPredicted RBP17.11■□□□□ 0.33
NCAM1-220ENST00000613217 USHBP1Q8N6Y0 703 aa17.11■□□□□ 0.33
NCAM1-220ENST00000613217 SENP3-EIF4A1A0A087X0R7 540 aa17.1■□□□□ 0.33
NCAM1-220ENST00000613217 MPRIPQ6WCQ1 1025 aa17.1■□□□□ 0.33
NCAM1-220ENST00000613217 AK7Q96M32 723 aa17.1■□□□□ 0.33
NCAM1-220ENST00000613217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.1■□□□□ 0.33
NCAM1-220ENST00000613217 PLEKHG2Q9H7P9 1386 aa17.1■□□□□ 0.33
NCAM1-220ENST00000613217 TRIM26Q12899 539 aaPredicted RBP17.09■□□□□ 0.33
NCAM1-220ENST00000613217 RGPD2P0DJD1 1756 aa17.09■□□□□ 0.33
NCAM1-220ENST00000613217 KIF20BQ96Q89 1820 aa17.09■□□□□ 0.33
NCAM1-220ENST00000613217 NKX1-1Q15270 411 aaPredicted RBP17.07■□□□□ 0.32
NCAM1-220ENST00000613217 NLGN2Q8NFZ4 835 aa17.07■□□□□ 0.32
NCAM1-220ENST00000613217 TUBGCP6Q96RT7 1819 aa17.07■□□□□ 0.32
NCAM1-220ENST00000613217 C5P01031 1676 aa17.07■□□□□ 0.32
NCAM1-220ENST00000613217 WASHC2AQ641Q2 1341 aa17.06■□□□□ 0.32
NCAM1-220ENST00000613217 PPM1GO15355 546 aaPredicted RBP17.06■□□□□ 0.32
NCAM1-220ENST00000613217 CYP27B1O15528 508 aa17.06■□□□□ 0.32
NCAM1-220ENST00000613217 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
NCAM1-220ENST00000613217 SSFA2P28290 1259 aa17.05■□□□□ 0.32
NCAM1-220ENST00000613217 TMOD3Q9NYL9 352 aa17.05■□□□□ 0.32
NCAM1-220ENST00000613217 NCAPD2Q15021 1401 aa17.04■□□□□ 0.32
NCAM1-220ENST00000613217 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
NCAM1-220ENST00000613217 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
NCAM1-220ENST00000613217 EMILIN1Q9Y6C2 1016 aa17.04■□□□□ 0.32
NCAM1-220ENST00000613217 PKD1L3Q7Z443 1732 aa17.02■□□□□ 0.32
NCAM1-220ENST00000613217 LOC102724428A0A0B4J2F2 783 aa17.02■□□□□ 0.32
NCAM1-220ENST00000613217 HSP90AB1P08238 724 aaKnown RBP17.02■□□□□ 0.32
NCAM1-220ENST00000613217 SIK1P57059 783 aa17.02■□□□□ 0.32
NCAM1-220ENST00000613217 PIGBQ92521 554 aa17.02■□□□□ 0.32
NCAM1-220ENST00000613217 CARD14Q9BXL6 1004 aa17.02■□□□□ 0.32
NCAM1-220ENST00000613217 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
NCAM1-220ENST00000613217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.01■□□□□ 0.31
NCAM1-220ENST00000613217 YBX3P16989 372 aaKnown RBP eCLIP17.01■□□□□ 0.31
NCAM1-220ENST00000613217 GOLGB1Q14789 3259 aaKnown RBP17■□□□□ 0.31
NCAM1-220ENST00000613217 TAF1LQ8IZX4 1826 aa16.99■□□□□ 0.31
NCAM1-220ENST00000613217 EYA1Q99502 592 aa16.99■□□□□ 0.31
NCAM1-220ENST00000613217 GPBP1L1Q9HC44 474 aaPredicted RBP16.99■□□□□ 0.31
NCAM1-220ENST00000613217 ANKRD26Q9UPS8 1709 aa16.99■□□□□ 0.31
NCAM1-220ENST00000613217 PHF14O94880 888 aa16.98■□□□□ 0.31
NCAM1-220ENST00000613217 ERVV-2B6SEH9 535 aa16.97■□□□□ 0.31
NCAM1-220ENST00000613217 GNPATO15228 680 aa16.97■□□□□ 0.31
NCAM1-220ENST00000613217 PHKG2P15735 406 aa16.97■□□□□ 0.31
NCAM1-220ENST00000613217 ATP6V1AP38606 617 aa16.97■□□□□ 0.31
NCAM1-220ENST00000613217 POLKQ9UBT6 870 aa16.97■□□□□ 0.31
NCAM1-220ENST00000613217 ITGB4P16144 1822 aa16.97■□□□□ 0.31
NCAM1-220ENST00000613217 ADRA2BP18089 450 aa16.96■□□□□ 0.31
NCAM1-220ENST00000613217 ATP10DQ9P241 1426 aa16.96■□□□□ 0.3
NCAM1-220ENST00000613217 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.3
NCAM1-220ENST00000613217 AMOTQ4VCS5 1084 aa16.95■□□□□ 0.3
NCAM1-220ENST00000613217 PLEKHO1Q53GL0 409 aaPredicted RBP16.95■□□□□ 0.3
NCAM1-220ENST00000613217 NLGN1Q8N2Q7 840 aa16.95■□□□□ 0.3
NCAM1-220ENST00000613217 DCAF5Q96JK2 942 aa16.95■□□□□ 0.3
NCAM1-220ENST00000613217 RTCBQ9Y3I0 505 aaKnown RBP16.95■□□□□ 0.3
NCAM1-220ENST00000613217 TOGARAM1Q9Y4F4 1720 aa16.95■□□□□ 0.3
NCAM1-220ENST00000613217 TRAPPC3LQ5T215 181 aa16.94■□□□□ 0.3
NCAM1-220ENST00000613217 LINC00116Q8NCU8 138 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms