RNA–Protein interactions for RNA: ENST00000612814.4

SLC46A1-207, Transcript of solute carrier family 46 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC46A1, Length 6,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-207ENST00000612814 NEBLO76041 1014 aa15.25■□□□□ 0.03
SLC46A1-207ENST00000612814 CASTP20810 708 aaKnown RBP15.25■□□□□ 0.03
SLC46A1-207ENST00000612814 GBP2P32456 591 aaPredicted RBP15.25■□□□□ 0.03
SLC46A1-207ENST00000612814 RBM25P49756 843 aaKnown RBP15.25■□□□□ 0.03
SLC46A1-207ENST00000612814 ATF7IPQ6VMQ6 1270 aa15.25■□□□□ 0.03
SLC46A1-207ENST00000612814 SMTNL1A8MU46 457 aa15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 SHTN1A0MZ66 631 aa15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 SSR1P43307 286 aaKnown RBP15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 TAF4BQ92750 862 aa15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 DESP17661 470 aa15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 CCDC184Q52MB2 194 aa15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 PLEKHO1Q53GL0 409 aaPredicted RBP15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 CFAP70Q5T0N1 1121 aa15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 TRMT1Q9NXH9 659 aaKnown RBP15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 NOL7Q9UMY1 257 aaKnown RBP15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 C11orf95C9JLR9 678 aaPredicted RBP15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 CIZ1Q9ULV3 898 aaPredicted RBP15.24■□□□□ 0.03
SLC46A1-207ENST00000612814 MYL6BP14649 208 aa15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 CASQ1P31415 396 aa15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 DNA2P51530 1060 aa15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 PROSER2Q86WR7 435 aaPredicted RBP15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 CCDC83Q8IWF9 413 aa15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 MAP2K1Q02750 393 aaPredicted RBP15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 TXNDC2Q86VQ3 553 aa15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 DDX54Q8TDD1 881 aaKnown RBP15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 CCDC97Q96F63 343 aaPredicted RBP15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 GPRASP1Q5JY77 1395 aa15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 GPATCH11Q8N954 259 aa15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 ZFP91Q96JP5 570 aaPredicted RBP15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 CCT4P50991 539 aaKnown RBP15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 PIP4K2BP78356 416 aa15.23■□□□□ 0.03
SLC46A1-207ENST00000612814 NUTM1Q86Y26 1132 aa15.22■□□□□ 0.03
SLC46A1-207ENST00000612814 AFAP1Q8N556 730 aa15.22■□□□□ 0.03
SLC46A1-207ENST00000612814 BMP2KQ9NSY1 1161 aaPredicted RBP15.22■□□□□ 0.03
SLC46A1-207ENST00000612814 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
SLC46A1-207ENST00000612814 SFPQP23246 707 aaKnown RBP eCLIP15.22■□□□□ 0.03
SLC46A1-207ENST00000612814 GTF2F1P35269 517 aaKnown RBP eCLIP15.22■□□□□ 0.03
SLC46A1-207ENST00000612814 RNF187Q5TA31 235 aaPredicted RBP15.22■□□□□ 0.03
SLC46A1-207ENST00000612814 IPO4Q8TEX9 1081 aaKnown RBP15.22■□□□□ 0.03
SLC46A1-207ENST00000612814 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.22■□□□□ 0.03
SLC46A1-207ENST00000612814 KLHL10Q6JEL2 608 aa15.21■□□□□ 0.03
SLC46A1-207ENST00000612814 SULT6B1Q6IMI4 303 aa15.21■□□□□ 0.03
SLC46A1-207ENST00000612814 BCCIPQ9P287 314 aaKnown RBP eCLIP15.21■□□□□ 0.03
SLC46A1-207ENST00000612814 C16orf45Q96MC5 204 aaPredicted RBP15.21■□□□□ 0.03
SLC46A1-207ENST00000612814 MPHOSPH10O00566 681 aaKnown RBP15.21■□□□□ 0.03
SLC46A1-207ENST00000612814 SRGAP3O43295 1099 aa15.21■□□□□ 0.03
SLC46A1-207ENST00000612814 CCDC57Q2TAC2 916 aa15.21■□□□□ 0.03
SLC46A1-207ENST00000612814 ZSCAN31Q96LW9 406 aaPredicted RBP15.21■□□□□ 0.03
SLC46A1-207ENST00000612814 RAI14Q9P0K7 980 aa15.21■□□□□ 0.03
SLC46A1-207ENST00000612814 SRCIN1Q9C0H9 1055 aa15.21■□□□□ 0.02
SLC46A1-207ENST00000612814 USP25Q9UHP3 1055 aa15.2■□□□□ 0.02
SLC46A1-207ENST00000612814 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
SLC46A1-207ENST00000612814 KIF4BQ2VIQ3 1234 aa15.2■□□□□ 0.02
SLC46A1-207ENST00000612814 KIF18AQ8NI77 898 aa15.2■□□□□ 0.02
SLC46A1-207ENST00000612814 RBM5P52756 815 aaKnown RBP eCLIP15.2■□□□□ 0.02
SLC46A1-207ENST00000612814 CLIP2Q9UDT6 1046 aa15.2■□□□□ 0.02
SLC46A1-207ENST00000612814 NBPF1Q3BBV0 1214 aa15.2■□□□□ 0.02
SLC46A1-207ENST00000612814 PPP4R3BQ5MIZ7 849 aa15.2■□□□□ 0.02
SLC46A1-207ENST00000612814 JAKMIP3Q5VZ66 844 aa15.2■□□□□ 0.02
SLC46A1-207ENST00000612814 TNNT1P13805 278 aa15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 MATR3P43243 847 aaKnown RBP eCLIP15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 CCDC85AQ96PX6 553 aaPredicted RBP15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 SMARCA5O60264 1052 aaPredicted RBP15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 SSFA2P28290 1259 aa15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 TOP2AP11388 1531 aaKnown RBP15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 FANCD2Q9BXW9 1451 aa15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 TDO2P48775 406 aa15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 ZSCAN25Q6NSZ9 544 aa15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 PRAM1Q96QH2 718 aa15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 GBP3Q9H0R5 595 aa15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 SMG6Q86US8 1419 aaKnown RBP15.19■□□□□ 0.02
SLC46A1-207ENST00000612814 CDKL5O76039 1030 aa15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 GUCY1B3Q02153 619 aa15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 CKAP2LQ8IYA6 745 aa15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 SLC12A5Q9H2X9 1139 aa15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 KIF5CO60282 957 aa15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 CCDC183Q5T5S1 534 aa15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 PNISRQ8TF01 805 aaKnown RBP15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 CPLX3Q8WVH0 158 aa15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 FGD6Q6ZV73 1430 aa15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 TMEM57Q8N5G2 664 aa15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 UBAC1Q9BSL1 405 aa15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 EXOC6BQ9Y2D4 811 aa15.18■□□□□ 0.02
SLC46A1-207ENST00000612814 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
SLC46A1-207ENST00000612814 SLC26A8Q96RN1 970 aa15.17■□□□□ 0.02
SLC46A1-207ENST00000612814 TATP17735 454 aaPredicted RBP15.17■□□□□ 0.02
SLC46A1-207ENST00000612814 ZNF397Q8NF99 534 aaPredicted RBP15.17■□□□□ 0.02
SLC46A1-207ENST00000612814 STAC3Q96MF2 364 aa15.17■□□□□ 0.02
SLC46A1-207ENST00000612814 LARP6Q9BRS8 491 aaKnown RBP15.17■□□□□ 0.02
SLC46A1-207ENST00000612814 ZSCAN12O43309 604 aa15.17■□□□□ 0.02
SLC46A1-207ENST00000612814 CCDC178Q5BJE1 867 aa15.17■□□□□ 0.02
SLC46A1-207ENST00000612814 SPA17Q15506 151 aa15.17■□□□□ 0.02
SLC46A1-207ENST00000612814 ZNF76P36508 570 aa15.17■□□□□ 0.02
SLC46A1-207ENST00000612814 MPHOSPH8Q99549 860 aa15.17■□□□□ 0.02
SLC46A1-207ENST00000612814 TOP1P11387 765 aaKnown RBP15.16■□□□□ 0.02
SLC46A1-207ENST00000612814 PRPF40BQ6NWY9 871 aaKnown RBP15.16■□□□□ 0.02
SLC46A1-207ENST00000612814 USP5P45974 858 aa15.16■□□□□ 0.02
SLC46A1-207ENST00000612814 IFFO1Q0D2I5 559 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms