RNA–Protein interactions for RNA: ENST00000612624.4

SMIM11B-201, Transcript of small integral membrane protein 11B, humanhuman

TSL 1 (best) BASIC

Gene SMIM11B, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-201ENST00000612624 USP47Q96K76 1375 aa11.21□□□□□ -0.61
SMIM11B-201ENST00000612624 GRIN3BO60391 1043 aa11.21□□□□□ -0.61
SMIM11B-201ENST00000612624 SLC15A2Q16348 729 aa11.21□□□□□ -0.61
SMIM11B-201ENST00000612624 EFCAB3Q8N7B9 438 aa11.21□□□□□ -0.61
SMIM11B-201ENST00000612624 PHF12Q96QT6 1004 aa11.21□□□□□ -0.61
SMIM11B-201ENST00000612624 GOLGB1Q14789 3259 aaKnown RBP11.2□□□□□ -0.62
SMIM11B-201ENST00000612624 ATP10DQ9P241 1426 aa11.2□□□□□ -0.62
SMIM11B-201ENST00000612624 CENPJQ9HC77 1338 aaPredicted RBP11.2□□□□□ -0.62
SMIM11B-201ENST00000612624 APLP1P51693 650 aa11.2□□□□□ -0.62
SMIM11B-201ENST00000612624 TCP11L2Q8N4U5 519 aa11.2□□□□□ -0.62
SMIM11B-201ENST00000612624 DNAJC5GQ8N7S2 189 aa11.2□□□□□ -0.62
SMIM11B-201ENST00000612624 STK32BQ9NY57 414 aa11.2□□□□□ -0.62
SMIM11B-201ENST00000612624 POGKQ9P215 609 aa11.2□□□□□ -0.62
SMIM11B-201ENST00000612624 AKAP12Q02952 1782 aa11.2□□□□□ -0.62
SMIM11B-201ENST00000612624 ATP7BP35670 1465 aa11.19□□□□□ -0.62
SMIM11B-201ENST00000612624 SSH2Q76I76 1423 aa11.19□□□□□ -0.62
SMIM11B-201ENST00000612624 PRR36Q9H6K5 1346 aa11.19□□□□□ -0.62
SMIM11B-201ENST00000612624 FBXO22Q8NEZ5 403 aa11.19□□□□□ -0.62
SMIM11B-201ENST00000612624 GPBP1L1Q9HC44 474 aaPredicted RBP11.19□□□□□ -0.62
SMIM11B-201ENST00000612624 ADCY9O60503 1353 aa11.18□□□□□ -0.62
SMIM11B-201ENST00000612624 ST20-MTHFSA0A0A6YYL1 179 aa11.18□□□□□ -0.62
SMIM11B-201ENST00000612624 SOX12O15370 315 aa11.18□□□□□ -0.62
SMIM11B-201ENST00000612624 COL13A1Q5TAT6 717 aaPredicted RBP11.18□□□□□ -0.62
SMIM11B-201ENST00000612624 TESK2Q96S53 571 aa11.18□□□□□ -0.62
SMIM11B-201ENST00000612624 TRPM3Q9HCF6 1732 aaPredicted RBP11.18□□□□□ -0.62
SMIM11B-201ENST00000612624 ALS2Q96Q42 1657 aa11.17□□□□□ -0.62
SMIM11B-201ENST00000612624 KIAA0232Q92628 1395 aa11.17□□□□□ -0.62
SMIM11B-201ENST00000612624 NLRP6P59044 892 aa11.17□□□□□ -0.62
SMIM11B-201ENST00000612624 PEAK1Q9H792 1746 aa11.16□□□□□ -0.62
SMIM11B-201ENST00000612624 HSPA5P11021 654 aaKnown RBP11.16□□□□□ -0.62
SMIM11B-201ENST00000612624 JMYQ8N9B5 988 aa11.16□□□□□ -0.62
SMIM11B-201ENST00000612624 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
SMIM11B-201ENST00000612624 SBNO2Q9Y2G9 1366 aa11.16□□□□□ -0.62
SMIM11B-201ENST00000612624 MON2Q7Z3U7 1717 aa11.15□□□□□ -0.62
SMIM11B-201ENST00000612624 WASLO00401 505 aaPredicted RBP11.15□□□□□ -0.62
SMIM11B-201ENST00000612624 PPP1R37O75864 691 aa11.15□□□□□ -0.62
SMIM11B-201ENST00000612624 TNS4Q8IZW8 715 aa11.15□□□□□ -0.62
SMIM11B-201ENST00000612624 CRYBG1Q9Y4K1 1723 aa11.15□□□□□ -0.63
SMIM11B-201ENST00000612624 TXNRD1Q16881 649 aa11.14□□□□□ -0.63
SMIM11B-201ENST00000612624 SLC16A10Q8TF71 515 aa11.14□□□□□ -0.63
SMIM11B-201ENST00000612624 CDK19Q9BWU1 502 aa11.14□□□□□ -0.63
SMIM11B-201ENST00000612624 STRN4Q9NRL3 753 aa11.14□□□□□ -0.63
SMIM11B-201ENST00000612624 PARP4Q9UKK3 1724 aaKnown RBP11.14□□□□□ -0.63
SMIM11B-201ENST00000612624 WDR70Q9NW82 654 aa11.13□□□□□ -0.63
SMIM11B-201ENST00000612624 USP35Q9P2H5 1018 aa11.13□□□□□ -0.63
SMIM11B-201ENST00000612624 CPDO75976 1380 aa11.13□□□□□ -0.63
SMIM11B-201ENST00000612624 LARP1Q6PKG0 1096 aaKnown RBP11.12□□□□□ -0.63
SMIM11B-201ENST00000612624 CD163L1Q9NR16 1453 aa11.12□□□□□ -0.63
SMIM11B-201ENST00000612624 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
SMIM11B-201ENST00000612624 HAX1O00165 279 aa11.11□□□□□ -0.63
SMIM11B-201ENST00000612624 EVA1CP58658 441 aa11.11□□□□□ -0.63
SMIM11B-201ENST00000612624 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
SMIM11B-201ENST00000612624 KIF3CO14782 793 aa11.1□□□□□ -0.63
SMIM11B-201ENST00000612624 YBX3P16989 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMIM11B-201ENST00000612624 CHRNA2Q15822 529 aa11.1□□□□□ -0.63
SMIM11B-201ENST00000612624 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
SMIM11B-201ENST00000612624 NUDT16Q96DE0 195 aaKnown RBP11.1□□□□□ -0.63
SMIM11B-201ENST00000612624 PPIP5K1Q6PFW1 1433 aa11.09□□□□□ -0.63
SMIM11B-201ENST00000612624 PIK3C2AO00443 1686 aa11.09□□□□□ -0.63
SMIM11B-201ENST00000612624 POLD1P28340 1107 aa11.09□□□□□ -0.63
SMIM11B-201ENST00000612624 EIF4G2P78344 907 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMIM11B-201ENST00000612624 PTF1AQ7RTS3 328 aa11.09□□□□□ -0.63
SMIM11B-201ENST00000612624 MS4A3Q96HJ5 214 aa11.09□□□□□ -0.63
SMIM11B-201ENST00000612624 TMEM106CQ9BVX2 250 aa11.09□□□□□ -0.63
SMIM11B-201ENST00000612624 EVC2Q86UK5 1308 aa11.09□□□□□ -0.63
SMIM11B-201ENST00000612624 KIF20BQ96Q89 1820 aa11.08□□□□□ -0.64
SMIM11B-201ENST00000612624 SRPK2P78362 688 aaKnown RBP11.08□□□□□ -0.64
SMIM11B-201ENST00000612624 DDB1Q16531 1140 aa11.08□□□□□ -0.64
SMIM11B-201ENST00000612624 KLRG1Q96E93 195 aa11.08□□□□□ -0.64
SMIM11B-201ENST00000612624 CDCA7Q9BWT1 371 aaPredicted RBP11.08□□□□□ -0.64
SMIM11B-201ENST00000612624 TRPC6Q9Y210 931 aa11.08□□□□□ -0.64
SMIM11B-201ENST00000612624 CRB1P82279 1406 aa11.08□□□□□ -0.64
SMIM11B-201ENST00000612624 PAPPAQ13219 1627 aa11.07□□□□□ -0.64
SMIM11B-201ENST00000612624 PELP1Q8IZL8 1130 aaKnown RBP11.07□□□□□ -0.64
SMIM11B-201ENST00000612624 NLGN2Q8NFZ4 835 aa11.07□□□□□ -0.64
SMIM11B-201ENST00000612624 LMO7Q8WWI1 1683 aa11.07□□□□□ -0.64
SMIM11B-201ENST00000612624 PHRF1Q9P1Y6 1649 aaKnown RBP11.06□□□□□ -0.64
SMIM11B-201ENST00000612624 BRD4O60885 1362 aaPredicted RBP11.06□□□□□ -0.64
SMIM11B-201ENST00000612624 TOMM70O94826 608 aa11.06□□□□□ -0.64
SMIM11B-201ENST00000612624 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
SMIM11B-201ENST00000612624 COL24A1Q17RW2 1714 aa11.06□□□□□ -0.64
SMIM11B-201ENST00000612624 COL5A2P05997 1499 aaPredicted RBP11.06□□□□□ -0.64
SMIM11B-201ENST00000612624 POLR3AO14802 1390 aaPredicted RBP11.05□□□□□ -0.64
SMIM11B-201ENST00000612624 USP54Q70EL1 1684 aa11.05□□□□□ -0.64
SMIM11B-201ENST00000612624 ZC3H6P61129 1189 aaKnown RBP11.05□□□□□ -0.64
SMIM11B-201ENST00000612624 GOLGA2Q08379 1002 aa11.05□□□□□ -0.64
SMIM11B-201ENST00000612624 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
SMIM11B-201ENST00000612624 CABP1Q9NZU7 370 aa11.05□□□□□ -0.64
SMIM11B-201ENST00000612624 ACEP12821 1306 aa11.05□□□□□ -0.64
SMIM11B-201ENST00000612624 SBF2Q86WG5 1849 aa11.05□□□□□ -0.64
SMIM11B-201ENST00000612624 CPSF1Q10570 1443 aaKnown RBP11.04□□□□□ -0.64
SMIM11B-201ENST00000612624 ZEB1P37275 1124 aaPredicted RBP11.04□□□□□ -0.64
SMIM11B-201ENST00000612624 HOMEZQ8IX15 550 aa11.04□□□□□ -0.64
SMIM11B-201ENST00000612624 MARCH10Q8NA82 808 aaPredicted RBP11.04□□□□□ -0.64
SMIM11B-201ENST00000612624 SLC12A5Q9H2X9 1139 aa11.04□□□□□ -0.64
SMIM11B-201ENST00000612624 LRRC37A3O60309 1634 aa11.04□□□□□ -0.64
SMIM11B-201ENST00000612624 USP19O94966 1318 aa11.04□□□□□ -0.64
SMIM11B-201ENST00000612624 KIF7Q2M1P5 1343 aa11.04□□□□□ -0.64
SMIM11B-201ENST00000612624 ANKRD26Q9UPS8 1709 aa11.04□□□□□ -0.64
SMIM11B-201ENST00000612624 PLEKHG3A1L390 1219 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms