RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 BRD4O60885 1362 aaPredicted RBP10.73□□□□□ -0.69
PTCHD3P1-201ENST00000612350 KAT6BQ8WYB5 2073 aa10.72□□□□□ -0.69
PTCHD3P1-201ENST00000612350 SLC27A3Q5K4L6 730 aa10.72□□□□□ -0.69
PTCHD3P1-201ENST00000612350 CDK19Q9BWU1 502 aa10.72□□□□□ -0.69
PTCHD3P1-201ENST00000612350 TFCP2L1Q9NZI6 479 aa10.72□□□□□ -0.69
PTCHD3P1-201ENST00000612350 WWC3Q9ULE0 1092 aa10.72□□□□□ -0.69
PTCHD3P1-201ENST00000612350 CD2APQ9Y5K6 639 aa10.72□□□□□ -0.69
PTCHD3P1-201ENST00000612350 SLIT3O75094 1523 aa10.71□□□□□ -0.69
PTCHD3P1-201ENST00000612350 TNS2Q63HR2 1409 aa10.71□□□□□ -0.69
PTCHD3P1-201ENST00000612350 CLEC11AQ9Y240 323 aa10.71□□□□□ -0.69
PTCHD3P1-201ENST00000612350 RGPD5Q99666 1765 aa10.7□□□□□ -0.7
PTCHD3P1-201ENST00000612350 HAX1O00165 279 aa10.7□□□□□ -0.7
PTCHD3P1-201ENST00000612350 COL23A1Q86Y22 540 aaPredicted RBP10.7□□□□□ -0.7
PTCHD3P1-201ENST00000612350 KCNQ4P56696 695 aa10.69□□□□□ -0.7
PTCHD3P1-201ENST00000612350 TRPM1Q7Z4N2 1603 aa10.69□□□□□ -0.7
PTCHD3P1-201ENST00000612350 CCDC7Q96M83 1385 aa10.68□□□□□ -0.7
PTCHD3P1-201ENST00000612350 NLRP6P59044 892 aa10.68□□□□□ -0.7
PTCHD3P1-201ENST00000612350 ARHGEF25Q86VW2 580 aa10.68□□□□□ -0.7
PTCHD3P1-201ENST00000612350 RBM46Q8TBY0 533 aaKnown RBP10.68□□□□□ -0.7
PTCHD3P1-201ENST00000612350 MPHOSPH9Q99550 1183 aa10.68□□□□□ -0.7
PTCHD3P1-201ENST00000612350 ABCC6O95255 1503 aa10.68□□□□□ -0.7
PTCHD3P1-201ENST00000612350 PPIP5K1Q6PFW1 1433 aa10.67□□□□□ -0.7
PTCHD3P1-201ENST00000612350 CSB-PGBD3P0DP91 1061 aa10.67□□□□□ -0.7
PTCHD3P1-201ENST00000612350 NMRK2Q9NPI5 230 aa10.67□□□□□ -0.7
PTCHD3P1-201ENST00000612350 CPSF1Q10570 1443 aaKnown RBP10.67□□□□□ -0.7
PTCHD3P1-201ENST00000612350 MSL1Q68DK7 614 aa10.66□□□□□ -0.7
PTCHD3P1-201ENST00000612350 HSPA1AP0DMV8 641 aaKnown RBP10.65□□□□□ -0.7
PTCHD3P1-201ENST00000612350 HSPA1BP0DMV9 641 aaKnown RBP10.65□□□□□ -0.7
PTCHD3P1-201ENST00000612350 IGSF1Q8N6C5 1336 aa10.64□□□□□ -0.71
PTCHD3P1-201ENST00000612350 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
PTCHD3P1-201ENST00000612350 FSTL1Q12841 308 aa10.64□□□□□ -0.71
PTCHD3P1-201ENST00000612350 CICQ96RK0 1608 aaPredicted RBP10.64□□□□□ -0.71
PTCHD3P1-201ENST00000612350 LY75O60449 1722 aa10.64□□□□□ -0.71
PTCHD3P1-201ENST00000612350 IL2RBP14784 551 aa10.62□□□□□ -0.71
PTCHD3P1-201ENST00000612350 PIK3C2AO00443 1686 aa10.61□□□□□ -0.71
PTCHD3P1-201ENST00000612350 PPARGC1BQ86YN6 1023 aaKnown RBP10.61□□□□□ -0.71
PTCHD3P1-201ENST00000612350 KCNH5Q8NCM2 988 aa10.61□□□□□ -0.71
PTCHD3P1-201ENST00000612350 CCNL1Q9UK58 526 aaPredicted RBP10.6□□□□□ -0.71
PTCHD3P1-201ENST00000612350 NSD2O96028 1365 aa10.6□□□□□ -0.71
PTCHD3P1-201ENST00000612350 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
PTCHD3P1-201ENST00000612350 KDM2AQ9Y2K7 1162 aa10.59□□□□□ -0.71
PTCHD3P1-201ENST00000612350 C16orf71Q8IYS4 520 aaPredicted RBP10.58□□□□□ -0.72
PTCHD3P1-201ENST00000612350 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
PTCHD3P1-201ENST00000612350 NLRP2Q9NX02 1062 aa10.58□□□□□ -0.72
PTCHD3P1-201ENST00000612350 CABP1Q9NZU7 370 aa10.58□□□□□ -0.72
PTCHD3P1-201ENST00000612350 NFAT5O94916 1531 aa10.58□□□□□ -0.72
PTCHD3P1-201ENST00000612350 ERBB3P21860 1342 aa10.58□□□□□ -0.72
PTCHD3P1-201ENST00000612350 ANKRD36BQ8N2N9 1353 aa10.57□□□□□ -0.72
PTCHD3P1-201ENST00000612350 SOX12O15370 315 aa10.57□□□□□ -0.72
PTCHD3P1-201ENST00000612350 PRR29P0C7W0 189 aa10.57□□□□□ -0.72
PTCHD3P1-201ENST00000612350 SRPK2P78362 688 aaKnown RBP10.57□□□□□ -0.72
PTCHD3P1-201ENST00000612350 FLAD1Q8NFF5 587 aa10.56□□□□□ -0.72
PTCHD3P1-201ENST00000612350 DDX54Q8TDD1 881 aaKnown RBP10.56□□□□□ -0.72
PTCHD3P1-201ENST00000612350 DCAF11Q8TEB1 546 aa10.56□□□□□ -0.72
PTCHD3P1-201ENST00000612350 SYTL4Q96C24 671 aaPredicted RBP10.56□□□□□ -0.72
PTCHD3P1-201ENST00000612350 C10orf71Q711Q0 1435 aa10.56□□□□□ -0.72
PTCHD3P1-201ENST00000612350 USP54Q70EL1 1684 aa10.56□□□□□ -0.72
PTCHD3P1-201ENST00000612350 QRICH2Q9H0J4 1663 aa10.55□□□□□ -0.72
PTCHD3P1-201ENST00000612350 FAM161AQ3B820 660 aa10.55□□□□□ -0.72
PTCHD3P1-201ENST00000612350 AMIGO3Q86WK7 504 aa10.55□□□□□ -0.72
PTCHD3P1-201ENST00000612350 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
PTCHD3P1-201ENST00000612350 TTC21BQ7Z4L5 1316 aa10.55□□□□□ -0.72
PTCHD3P1-201ENST00000612350 ARHGAP27Q6ZUM4 889 aa10.54□□□□□ -0.72
PTCHD3P1-201ENST00000612350 SMC1BQ8NDV3 1235 aa10.54□□□□□ -0.72
PTCHD3P1-201ENST00000612350 RRAGCQ9HB90 399 aa10.54□□□□□ -0.72
PTCHD3P1-201ENST00000612350 KIAA1551Q9HCM1 1747 aa10.54□□□□□ -0.72
PTCHD3P1-201ENST00000612350 C5P01031 1676 aa10.53□□□□□ -0.72
PTCHD3P1-201ENST00000612350 DOT1LQ8TEK3 1739 aa10.53□□□□□ -0.72
PTCHD3P1-201ENST00000612350 C9orf131Q5VYM1 1079 aa10.53□□□□□ -0.72
PTCHD3P1-201ENST00000612350 SMIM5Q71RC9 77 aa10.53□□□□□ -0.72
PTCHD3P1-201ENST00000612350 PXDNLA1KZ92 1463 aa10.53□□□□□ -0.72
PTCHD3P1-201ENST00000612350 TAF1LQ8IZX4 1826 aa10.53□□□□□ -0.72
PTCHD3P1-201ENST00000612350 KCPQ6ZWJ8 1503 aa10.53□□□□□ -0.72
PTCHD3P1-201ENST00000612350 PCNTO95613 3336 aa10.53□□□□□ -0.72
PTCHD3P1-201ENST00000612350 ANKRD24Q8TF21 1146 aa10.52□□□□□ -0.73
PTCHD3P1-201ENST00000612350 PRDM10Q9NQV6 1147 aa10.52□□□□□ -0.73
PTCHD3P1-201ENST00000612350 BCS1LQ9Y276 419 aa10.52□□□□□ -0.73
PTCHD3P1-201ENST00000612350 KDM2BQ8NHM5 1336 aa10.52□□□□□ -0.73
PTCHD3P1-201ENST00000612350 USP47Q96K76 1375 aa10.52□□□□□ -0.73
PTCHD3P1-201ENST00000612350 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
PTCHD3P1-201ENST00000612350 TOGARAM1Q9Y4F4 1720 aa10.51□□□□□ -0.73
PTCHD3P1-201ENST00000612350 EVX2Q03828 476 aa10.51□□□□□ -0.73
PTCHD3P1-201ENST00000612350 N4BP2Q86UW6 1770 aaPredicted RBP10.51□□□□□ -0.73
PTCHD3P1-201ENST00000612350 PLEKHG2Q9H7P9 1386 aa10.51□□□□□ -0.73
PTCHD3P1-201ENST00000612350 A0A0G2JLW4 131 aa10.5□□□□□ -0.73
PTCHD3P1-201ENST00000612350 FOXN1O15353 648 aa10.5□□□□□ -0.73
PTCHD3P1-201ENST00000612350 TGFB2P61812 414 aa10.5□□□□□ -0.73
PTCHD3P1-201ENST00000612350 UBR3Q6ZT12 1888 aa10.5□□□□□ -0.73
PTCHD3P1-201ENST00000612350 TTC21AQ8NDW8 1320 aa10.5□□□□□ -0.73
PTCHD3P1-201ENST00000612350 C19orf67A6NJJ6 358 aa10.49□□□□□ -0.73
PTCHD3P1-201ENST00000612350 HMGB2P26583 209 aaKnown RBP10.49□□□□□ -0.73
PTCHD3P1-201ENST00000612350 TNRC6CQ9HCJ0 1690 aaKnown RBP10.49□□□□□ -0.73
PTCHD3P1-201ENST00000612350 PKD1L3Q7Z443 1732 aa10.49□□□□□ -0.73
PTCHD3P1-201ENST00000612350 C4BP0C0L5 1744 aa10.48□□□□□ -0.73
PTCHD3P1-201ENST00000612350 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.48□□□□□ -0.73
PTCHD3P1-201ENST00000612350 RGS19P49795 217 aa10.48□□□□□ -0.73
PTCHD3P1-201ENST00000612350 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
PTCHD3P1-201ENST00000612350 BRCA1P38398 1863 aaKnown RBP10.48□□□□□ -0.73
PTCHD3P1-201ENST00000612350 LTN1O94822 1766 aa10.47□□□□□ -0.73
PTCHD3P1-201ENST00000612350 FCHSD2O94868 740 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms