RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.46□□□□□ -0.25
CDH4-202ENST00000611855 SETBP1Q9Y6X0 1596 aa13.46□□□□□ -0.25
CDH4-202ENST00000611855 LRRC7Q96NW7 1537 aa13.46□□□□□ -0.25
CDH4-202ENST00000611855 ABCC4O15439 1325 aa13.46□□□□□ -0.25
CDH4-202ENST00000611855 MED14O60244 1454 aa13.46□□□□□ -0.26
CDH4-202ENST00000611855 INO80Q9ULG1 1556 aaPredicted RBP13.46□□□□□ -0.26
CDH4-202ENST00000611855 GNAI1P63096 354 aa13.46□□□□□ -0.26
CDH4-202ENST00000611855 RRS1Q15050 365 aaKnown RBP13.46□□□□□ -0.26
CDH4-202ENST00000611855 CLEC17AQ6ZS10 378 aa13.46□□□□□ -0.26
CDH4-202ENST00000611855 IDI1Q13907 227 aa13.45□□□□□ -0.26
CDH4-202ENST00000611855 DCTPP1Q9H773 170 aa13.45□□□□□ -0.26
CDH4-202ENST00000611855 LRSAM1Q6UWE0 723 aa13.44□□□□□ -0.26
CDH4-202ENST00000611855 MEIS3Q99687 375 aa13.44□□□□□ -0.26
CDH4-202ENST00000611855 USP32Q8NFA0 1604 aa13.44□□□□□ -0.26
CDH4-202ENST00000611855 SLC4A10Q6U841 1118 aa13.44□□□□□ -0.26
CDH4-202ENST00000611855 IBTKQ9P2D0 1353 aaPredicted RBP13.44□□□□□ -0.26
CDH4-202ENST00000611855 ATP2B3Q16720 1220 aa13.44□□□□□ -0.26
CDH4-202ENST00000611855 BCL11BQ9C0K0 894 aaPredicted RBP13.44□□□□□ -0.26
CDH4-202ENST00000611855 CHMP4BQ9H444 224 aaKnown RBP13.44□□□□□ -0.26
CDH4-202ENST00000611855 TTC12Q9H892 705 aaPredicted RBP13.44□□□□□ -0.26
CDH4-202ENST00000611855 PPLO60437 1756 aa13.44□□□□□ -0.26
CDH4-202ENST00000611855 CAMSAP1Q5T5Y3 1602 aa13.43□□□□□ -0.26
CDH4-202ENST00000611855 WAPLQ7Z5K2 1190 aa13.43□□□□□ -0.26
CDH4-202ENST00000611855 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
CDH4-202ENST00000611855 NME9Q86XW9 330 aa13.43□□□□□ -0.26
CDH4-202ENST00000611855 ARHGAP45Q92619 1136 aa13.43□□□□□ -0.26
CDH4-202ENST00000611855 MIS18AQ9NYP9 233 aa13.43□□□□□ -0.26
CDH4-202ENST00000611855 PDE4CQ08493 712 aa13.42□□□□□ -0.26
CDH4-202ENST00000611855 CASC1Q6TDU7 716 aa13.42□□□□□ -0.26
CDH4-202ENST00000611855 PTCH1Q13635 1447 aa13.42□□□□□ -0.26
CDH4-202ENST00000611855 MYRIPQ8NFW9 859 aa13.42□□□□□ -0.26
CDH4-202ENST00000611855 UPF3BQ9BZI7 483 aaKnown RBP13.42□□□□□ -0.26
CDH4-202ENST00000611855 SOX12O15370 315 aa13.42□□□□□ -0.26
CDH4-202ENST00000611855 MAPK8IP2Q13387 824 aaPredicted RBP13.42□□□□□ -0.26
CDH4-202ENST00000611855 ZNF710Q8N1W2 664 aa13.42□□□□□ -0.26
CDH4-202ENST00000611855 TMX3Q96JJ7 454 aa13.42□□□□□ -0.26
CDH4-202ENST00000611855 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
CDH4-202ENST00000611855 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
CDH4-202ENST00000611855 ARHGEF28Q8N1W1 1705 aaKnown RBP13.41□□□□□ -0.26
CDH4-202ENST00000611855 RAPGEF3O95398 923 aa13.41□□□□□ -0.26
CDH4-202ENST00000611855 MCM5P33992 734 aa13.41□□□□□ -0.26
CDH4-202ENST00000611855 CEP85Q6P2H3 762 aa13.41□□□□□ -0.26
CDH4-202ENST00000611855 LARP6Q9BRS8 491 aaKnown RBP13.41□□□□□ -0.26
CDH4-202ENST00000611855 PALD1Q9ULE6 856 aa13.41□□□□□ -0.26
CDH4-202ENST00000611855 F6X3S4 739 aa13.41□□□□□ -0.26
CDH4-202ENST00000611855 GADD45BO75293 160 aaPredicted RBP13.41□□□□□ -0.26
CDH4-202ENST00000611855 MCM10Q7L590 875 aa13.41□□□□□ -0.26
CDH4-202ENST00000611855 EXOC6BQ9Y2D4 811 aa13.41□□□□□ -0.26
CDH4-202ENST00000611855 AEBP1Q8IUX7 1158 aa13.41□□□□□ -0.26
CDH4-202ENST00000611855 USP25Q9UHP3 1055 aa13.41□□□□□ -0.26
CDH4-202ENST00000611855 FAM135BQ49AJ0 1406 aa13.4□□□□□ -0.26
CDH4-202ENST00000611855 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
CDH4-202ENST00000611855 UTP14CQ5TAP6 766 aaKnown RBP13.4□□□□□ -0.26
CDH4-202ENST00000611855 CWC22Q9HCG8 908 aaKnown RBP13.4□□□□□ -0.26
CDH4-202ENST00000611855 RPGRIP1LQ68CZ1 1315 aa13.4□□□□□ -0.26
CDH4-202ENST00000611855 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
CDH4-202ENST00000611855 ZNF428Q96B54 188 aa13.4□□□□□ -0.26
CDH4-202ENST00000611855 CFAP44Q96MT7 982 aa13.4□□□□□ -0.26
CDH4-202ENST00000611855 TSPY26PQ9H489 355 aa13.4□□□□□ -0.26
CDH4-202ENST00000611855 MSH6P52701 1360 aa13.4□□□□□ -0.26
CDH4-202ENST00000611855 KNDC1Q76NI1 1749 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 CD163L1Q9NR16 1453 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 ERC2O15083 957 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
CDH4-202ENST00000611855 FAM69CQ0P6D2 419 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 KIF3AQ9Y496 699 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 NEURL4Q96JN8 1562 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 PIK3R4Q99570 1358 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 VGLL3A8MV65 326 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 REC8O95072 547 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 NOLC1Q14978 699 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDH4-202ENST00000611855 ANO2Q9NQ90 1003 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 CGNQ9P2M7 1197 aaKnown RBP13.39□□□□□ -0.27
CDH4-202ENST00000611855 KIDINS220Q9ULH0 1771 aa13.39□□□□□ -0.27
CDH4-202ENST00000611855 PNPLA6Q8IY17 1366 aa13.38□□□□□ -0.27
CDH4-202ENST00000611855 TRIM6-TRIM34B2RNG4 842 aa13.38□□□□□ -0.27
CDH4-202ENST00000611855 ZNF853P0CG23 659 aa13.38□□□□□ -0.27
CDH4-202ENST00000611855 U2AF2P26368 475 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDH4-202ENST00000611855 ZNF771Q7L3S4 317 aaPredicted RBP13.38□□□□□ -0.27
CDH4-202ENST00000611855 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDH4-202ENST00000611855 PDCL2Q8N4E4 241 aa13.38□□□□□ -0.27
CDH4-202ENST00000611855 PUS7Q96PZ0 661 aaKnown RBP13.38□□□□□ -0.27
CDH4-202ENST00000611855 IL13P35225 146 aa13.38□□□□□ -0.27
CDH4-202ENST00000611855 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
CDH4-202ENST00000611855 BCL2L12Q9HB09 334 aa13.37□□□□□ -0.27
CDH4-202ENST00000611855 ZBTB22O15209 634 aa13.37□□□□□ -0.27
CDH4-202ENST00000611855 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
CDH4-202ENST00000611855 YTHDC2Q9H6S0 1430 aaKnown RBP13.36□□□□□ -0.27
CDH4-202ENST00000611855 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
CDH4-202ENST00000611855 HMGN5P82970 282 aaKnown RBP13.36□□□□□ -0.27
CDH4-202ENST00000611855 G2E3Q7L622 706 aa13.36□□□□□ -0.27
CDH4-202ENST00000611855 ATP10DQ9P241 1426 aa13.36□□□□□ -0.27
CDH4-202ENST00000611855 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
CDH4-202ENST00000611855 FBXO31Q5XUX0 539 aaPredicted RBP13.36□□□□□ -0.27
CDH4-202ENST00000611855 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
CDH4-202ENST00000611855 PDE1AP54750 535 aa13.35□□□□□ -0.27
CDH4-202ENST00000611855 GTPBP4Q9BZE4 634 aaKnown RBP13.35□□□□□ -0.27
CDH4-202ENST00000611855 SULT6B1Q6IMI4 303 aa13.35□□□□□ -0.27
CDH4-202ENST00000611855 ABCA9Q8IUA7 1624 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms