RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
ZNF248-208ENST00000611278 SLC15A2Q16348 729 aa11.35□□□□□ -0.59
ZNF248-208ENST00000611278 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
ZNF248-208ENST00000611278 CHD4Q14839 1912 aa11.35□□□□□ -0.59
ZNF248-208ENST00000611278 GTF2E1P29083 439 aaPredicted RBP11.34□□□□□ -0.59
ZNF248-208ENST00000611278 TXNRD1Q16881 649 aa11.34□□□□□ -0.59
ZNF248-208ENST00000611278 ZNF784Q8NCA9 323 aaPredicted RBP11.34□□□□□ -0.59
ZNF248-208ENST00000611278 CPSF1Q10570 1443 aaKnown RBP11.34□□□□□ -0.59
ZNF248-208ENST00000611278 ANO8Q9HCE9 1232 aaPredicted RBP11.33□□□□□ -0.59
ZNF248-208ENST00000611278 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
ZNF248-208ENST00000611278 ATF5Q9Y2D1 282 aaPredicted RBP11.33□□□□□ -0.6
ZNF248-208ENST00000611278 ST20-MTHFSA0A0A6YYL1 179 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 ZBTB7AO95365 584 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 TNNT2P45379 298 aaPredicted RBP11.32□□□□□ -0.6
ZNF248-208ENST00000611278 IP6K1Q92551 441 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 PCDH11XQ9BZA7 1347 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 PCDH11YQ9BZA8 1340 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 MYOM1P52179 1685 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 PTGER2P43116 358 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 CABP4P57796 275 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 SENP3-EIF4A1A0A087X0R7 540 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 TEFQ10587 303 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 AMOTQ4VCS5 1084 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 MARCH10Q8NA82 808 aaPredicted RBP11.32□□□□□ -0.6
ZNF248-208ENST00000611278 SYT17Q9BSW7 474 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 TNS2Q63HR2 1409 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 COL18A1P39060 1754 aa11.32□□□□□ -0.6
ZNF248-208ENST00000611278 ARHGEF25Q86VW2 580 aa11.31□□□□□ -0.6
ZNF248-208ENST00000611278 TRPM1Q7Z4N2 1603 aa11.31□□□□□ -0.6
ZNF248-208ENST00000611278 C1QTNF8P60827 252 aa11.31□□□□□ -0.6
ZNF248-208ENST00000611278 FHDC1Q9C0D6 1143 aaPredicted RBP11.3□□□□□ -0.6
ZNF248-208ENST00000611278 IFNL2Q8IZJ0 200 aa11.3□□□□□ -0.6
ZNF248-208ENST00000611278 SLC12A5Q9H2X9 1139 aa11.3□□□□□ -0.6
ZNF248-208ENST00000611278 NME9Q86XW9 330 aa11.3□□□□□ -0.6
ZNF248-208ENST00000611278 CCDC87Q9NVE4 849 aa11.3□□□□□ -0.6
ZNF248-208ENST00000611278 PARP3Q9Y6F1 533 aa11.3□□□□□ -0.6
ZNF248-208ENST00000611278 ZPR1O75312 459 aa11.3□□□□□ -0.6
ZNF248-208ENST00000611278 NHSQ6T4R5 1651 aa11.29□□□□□ -0.6
ZNF248-208ENST00000611278 MPRIPQ6WCQ1 1025 aa11.29□□□□□ -0.6
ZNF248-208ENST00000611278 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
ZNF248-208ENST00000611278 RFC4P35249 363 aa11.29□□□□□ -0.6
ZNF248-208ENST00000611278 GGNBP2Q9H3C7 697 aa11.29□□□□□ -0.6
ZNF248-208ENST00000611278 MIER1Q8N108 512 aa11.29□□□□□ -0.6
ZNF248-208ENST00000611278 U2SURPO15042 1029 aaKnown RBP11.28□□□□□ -0.6
ZNF248-208ENST00000611278 PROM2Q8N271 834 aa11.28□□□□□ -0.6
ZNF248-208ENST00000611278 MAPK8IP3Q9UPT6 1336 aa11.28□□□□□ -0.6
ZNF248-208ENST00000611278 RTCBQ9Y3I0 505 aaKnown RBP11.28□□□□□ -0.6
ZNF248-208ENST00000611278 A0A087WZG4 1122 aa11.28□□□□□ -0.6
ZNF248-208ENST00000611278 EDC4Q6P2E9 1401 aaKnown RBP11.28□□□□□ -0.6
ZNF248-208ENST00000611278 PIK3C2AO00443 1686 aa11.27□□□□□ -0.6
ZNF248-208ENST00000611278 SGIP1Q9BQI5 828 aa11.27□□□□□ -0.61
ZNF248-208ENST00000611278 GIGYF1O75420 1035 aaPredicted RBP11.27□□□□□ -0.61
ZNF248-208ENST00000611278 ZNF530Q6P9A1 599 aaPredicted RBP11.27□□□□□ -0.61
ZNF248-208ENST00000611278 QSER1Q2KHR3 1735 aa11.26□□□□□ -0.61
ZNF248-208ENST00000611278 USP31Q70CQ4 1352 aa11.25□□□□□ -0.61
ZNF248-208ENST00000611278 AXIN2Q9Y2T1 843 aa11.24□□□□□ -0.61
ZNF248-208ENST00000611278 STARD3NLO95772 234 aa11.24□□□□□ -0.61
ZNF248-208ENST00000611278 MTHFSP49914 203 aa11.24□□□□□ -0.61
ZNF248-208ENST00000611278 NLGN1Q8N2Q7 840 aa11.24□□□□□ -0.61
ZNF248-208ENST00000611278 TEX13AQ9BXU3 409 aaPredicted RBP11.24□□□□□ -0.61
ZNF248-208ENST00000611278 PAPPAQ13219 1627 aa11.24□□□□□ -0.61
ZNF248-208ENST00000611278 NEFLP07196 543 aa11.24□□□□□ -0.61
ZNF248-208ENST00000611278 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
ZNF248-208ENST00000611278 TRAPPC3LQ5T215 181 aa11.24□□□□□ -0.61
ZNF248-208ENST00000611278 FLT4P35916 1363 aa11.24□□□□□ -0.61
ZNF248-208ENST00000611278 NFAT5O94916 1531 aa11.24□□□□□ -0.61
ZNF248-208ENST00000611278 GPBP1L1Q9HC44 474 aaPredicted RBP11.24□□□□□ -0.61
ZNF248-208ENST00000611278 USP54Q70EL1 1684 aa11.23□□□□□ -0.61
ZNF248-208ENST00000611278 GAS2L2Q8NHY3 880 aa11.23□□□□□ -0.61
ZNF248-208ENST00000611278 ZNF652Q9Y2D9 606 aa11.23□□□□□ -0.61
ZNF248-208ENST00000611278 PHF14O94880 888 aa11.23□□□□□ -0.61
ZNF248-208ENST00000611278 IFFO2Q5TF58 517 aa11.23□□□□□ -0.61
ZNF248-208ENST00000611278 KAT6BQ8WYB5 2073 aa11.23□□□□□ -0.61
ZNF248-208ENST00000611278 ATP6V1AP38606 617 aa11.22□□□□□ -0.61
ZNF248-208ENST00000611278 RTL1A6NKG5 1358 aa11.22□□□□□ -0.61
ZNF248-208ENST00000611278 SRCAPQ6ZRS2 3230 aa11.22□□□□□ -0.61
ZNF248-208ENST00000611278 SBNO2Q9Y2G9 1366 aa11.22□□□□□ -0.61
ZNF248-208ENST00000611278 G3V3G9 751 aa11.22□□□□□ -0.61
ZNF248-208ENST00000611278 DCAF8Q5TAQ9 597 aa11.22□□□□□ -0.61
ZNF248-208ENST00000611278 PDGFDQ9GZP0 370 aaPredicted RBP11.22□□□□□ -0.61
ZNF248-208ENST00000611278 RGPD5Q99666 1765 aa11.22□□□□□ -0.61
ZNF248-208ENST00000611278 ERBB3P21860 1342 aa11.21□□□□□ -0.61
ZNF248-208ENST00000611278 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
ZNF248-208ENST00000611278 FAM208AQ9UK61 1670 aaKnown RBP11.21□□□□□ -0.61
ZNF248-208ENST00000611278 HSP90B1P14625 803 aaKnown RBP11.21□□□□□ -0.62
ZNF248-208ENST00000611278 BTAF1O14981 1849 aa11.21□□□□□ -0.62
ZNF248-208ENST00000611278 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
ZNF248-208ENST00000611278 ANKRD36BQ8N2N9 1353 aa11.2□□□□□ -0.62
ZNF248-208ENST00000611278 COL24A1Q17RW2 1714 aa11.2□□□□□ -0.62
ZNF248-208ENST00000611278 WDR43Q15061 677 aaKnown RBP eCLIP11.2□□□□□ -0.62
ZNF248-208ENST00000611278 HOXC9P31274 260 aa11.2□□□□□ -0.62
ZNF248-208ENST00000611278 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
ZNF248-208ENST00000611278 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
ZNF248-208ENST00000611278 MON2Q7Z3U7 1717 aa11.2□□□□□ -0.62
ZNF248-208ENST00000611278 GNPATO15228 680 aa11.2□□□□□ -0.62
ZNF248-208ENST00000611278 RRS1Q15050 365 aaKnown RBP11.2□□□□□ -0.62
ZNF248-208ENST00000611278 LMOD3Q0VAK6 560 aa11.19□□□□□ -0.62
ZNF248-208ENST00000611278 DIAPH1O60610 1272 aaKnown RBP11.19□□□□□ -0.62
ZNF248-208ENST00000611278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.621e-6■■■□□ 14.8
ZNF248-208ENST00000611278 DPY19L2Q6NUT2 758 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms