RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 SLC4A2P04920 1241 aa10.78□□□□□ -0.68
COL25A1-208ENST00000610288 PLEKHO1Q53GL0 409 aaPredicted RBP10.78□□□□□ -0.68
COL25A1-208ENST00000610288 TMCO3Q6UWJ1 677 aa10.78□□□□□ -0.68
COL25A1-208ENST00000610288 KIF18AQ8NI77 898 aa10.78□□□□□ -0.68
COL25A1-208ENST00000610288 SNX21Q969T3 373 aa10.78□□□□□ -0.68
COL25A1-208ENST00000610288 SPATA32Q96LK8 384 aa10.78□□□□□ -0.68
COL25A1-208ENST00000610288 SLC52A1Q9NWF4 448 aa10.77□□□□□ -0.68
COL25A1-208ENST00000610288 TMPOP42166 694 aaKnown RBP10.77□□□□□ -0.69
COL25A1-208ENST00000610288 ESCO1Q5FWF5 840 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 FILIP1Q7Z7B0 1213 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 SSH1Q8WYL5 1049 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 CFAP45Q9UL16 551 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 TOPBP1Q92547 1522 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 STK38Q15208 465 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 SMARCE1Q969G3 411 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 SLC26A8Q96RN1 970 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 TRIM34Q9BYJ4 488 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 RRAGDQ9NQL2 400 aaPredicted RBP10.77□□□□□ -0.69
COL25A1-208ENST00000610288 ZSCAN23Q3MJ62 389 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 RRP12Q5JTH9 1297 aaKnown RBP10.77□□□□□ -0.69
COL25A1-208ENST00000610288 LRSAM1Q6UWE0 723 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 IFT140Q96RY7 1462 aa10.77□□□□□ -0.69
COL25A1-208ENST00000610288 CBFA2T2O43439 604 aa10.76□□□□□ -0.69
COL25A1-208ENST00000610288 FILIP1LQ4L180 1135 aa10.76□□□□□ -0.69
COL25A1-208ENST00000610288 HDGFL1Q5TGJ6 251 aa10.76□□□□□ -0.69
COL25A1-208ENST00000610288 ERC1Q8IUD2 1116 aa10.76□□□□□ -0.69
COL25A1-208ENST00000610288 NEMFO60524 1076 aa10.76□□□□□ -0.69
COL25A1-208ENST00000610288 JMYQ8N9B5 988 aa10.76□□□□□ -0.69
COL25A1-208ENST00000610288 SERPINC1P01008 464 aa10.76□□□□□ -0.69
COL25A1-208ENST00000610288 ZNF692Q9BU19 519 aaPredicted RBP10.76□□□□□ -0.69
COL25A1-208ENST00000610288 RNF123Q5XPI4 1314 aa10.76□□□□□ -0.69
COL25A1-208ENST00000610288 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
COL25A1-208ENST00000610288 ANKLE2Q86XL3 938 aa10.76□□□□□ -0.69
COL25A1-208ENST00000610288 FCHSD2O94868 740 aa10.75□□□□□ -0.69
COL25A1-208ENST00000610288 TNNT1P13805 278 aa10.75□□□□□ -0.69
COL25A1-208ENST00000610288 CAGE1Q8TC20 777 aa10.75□□□□□ -0.69
COL25A1-208ENST00000610288 HOMEZQ8IX15 550 aa10.75□□□□□ -0.69
COL25A1-208ENST00000610288 TDO2P48775 406 aa10.75□□□□□ -0.69
COL25A1-208ENST00000610288 HDAC1Q13547 482 aaPredicted RBP10.75□□□□□ -0.69
COL25A1-208ENST00000610288 TRERF1Q96PN7 1200 aa10.75□□□□□ -0.69
COL25A1-208ENST00000610288 ADCY5O95622 1261 aa10.74□□□□□ -0.69
COL25A1-208ENST00000610288 SCAND2PQ9GZW5 306 aaPredicted RBP10.74□□□□□ -0.69
COL25A1-208ENST00000610288 PDRG1Q9NUG6 133 aa10.74□□□□□ -0.69
COL25A1-208ENST00000610288 ME1P48163 572 aa10.74□□□□□ -0.69
COL25A1-208ENST00000610288 BLOC1S2Q6QNY1 142 aa10.74□□□□□ -0.69
COL25A1-208ENST00000610288 TBC1D9Q6ZT07 1266 aa10.74□□□□□ -0.69
COL25A1-208ENST00000610288 KRT222Q8N1A0 295 aa10.74□□□□□ -0.69
COL25A1-208ENST00000610288 STK11IPQ8N1F8 1099 aa10.74□□□□□ -0.69
COL25A1-208ENST00000610288 UPF3BQ9BZI7 483 aaKnown RBP10.74□□□□□ -0.69
COL25A1-208ENST00000610288 TXLNBQ8N3L3 684 aa10.74□□□□□ -0.69
COL25A1-208ENST00000610288 RBM28Q9NW13 759 aaKnown RBP10.74□□□□□ -0.69
COL25A1-208ENST00000610288 SF3B2Q13435 895 aaKnown RBP10.74□□□□□ -0.69
COL25A1-208ENST00000610288 DDX11Q96FC9 970 aa10.74□□□□□ -0.69
COL25A1-208ENST00000610288 TRIM27P14373 513 aa10.73□□□□□ -0.69
COL25A1-208ENST00000610288 SMC5Q8IY18 1101 aa10.73□□□□□ -0.69
COL25A1-208ENST00000610288 STRN4Q9NRL3 753 aa10.73□□□□□ -0.69
COL25A1-208ENST00000610288 PIP4K2AP48426 406 aaPredicted RBP10.73□□□□□ -0.69
COL25A1-208ENST00000610288 CEBPZQ03701 1054 aaKnown RBP10.73□□□□□ -0.69
COL25A1-208ENST00000610288 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
COL25A1-208ENST00000610288 SMTNL1A8MU46 457 aa10.73□□□□□ -0.69
COL25A1-208ENST00000610288 FYB1O15117 783 aa10.73□□□□□ -0.69
COL25A1-208ENST00000610288 HMGB1P09429 215 aaKnown RBP10.73□□□□□ -0.69
COL25A1-208ENST00000610288 NEFHP12036 1026 aa10.73□□□□□ -0.69
COL25A1-208ENST00000610288 SFPQP23246 707 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL25A1-208ENST00000610288 NOLC1Q14978 699 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL25A1-208ENST00000610288 TCEAL9Q9UHQ7 104 aa10.73□□□□□ -0.69
COL25A1-208ENST00000610288 PAXBP1Q9Y5B6 917 aa10.73□□□□□ -0.69
COL25A1-208ENST00000610288 EPRSP07814 1512 aaKnown RBP10.73□□□□□ -0.69
COL25A1-208ENST00000610288 GTF2F1P35269 517 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL25A1-208ENST00000610288 FEZ1Q99689 392 aa10.73□□□□□ -0.69
COL25A1-208ENST00000610288 GBP3Q9H0R5 595 aa10.73□□□□□ -0.69
COL25A1-208ENST00000610288 DACH1Q9UI36 760 aa10.73□□□□□ -0.69
COL25A1-208ENST00000610288 NSD3Q9BZ95 1437 aa10.72□□□□□ -0.69
COL25A1-208ENST00000610288 RAB3GAP1Q15042 981 aa10.72□□□□□ -0.69
COL25A1-208ENST00000610288 JAKMIP1Q96N16 626 aaKnown RBP10.72□□□□□ -0.69
COL25A1-208ENST00000610288 SH2B1Q9NRF2 756 aaPredicted RBP10.72□□□□□ -0.69
COL25A1-208ENST00000610288 RPGRIP1LQ68CZ1 1315 aa10.72□□□□□ -0.69
COL25A1-208ENST00000610288 SPDYE4A6NLX3 237 aa10.72□□□□□ -0.69
COL25A1-208ENST00000610288 TBC1D2BQ9UPU7 963 aa10.72□□□□□ -0.69
COL25A1-208ENST00000610288 RTEL1-TNFRSF6BF6WH68 1400 aa10.72□□□□□ -0.69
COL25A1-208ENST00000610288 ZNF530Q6P9A1 599 aaPredicted RBP10.72□□□□□ -0.69
COL25A1-208ENST00000610288 C16orf45Q96MC5 204 aaPredicted RBP10.72□□□□□ -0.69
COL25A1-208ENST00000610288 ABCC5O15440 1437 aa10.72□□□□□ -0.69
COL25A1-208ENST00000610288 PARD3Q8TEW0 1356 aa10.72□□□□□ -0.69
COL25A1-208ENST00000610288 NFE2L2Q16236 605 aa10.72□□□□□ -0.69
COL25A1-208ENST00000610288 PPFIBP1Q86W92 1011 aa10.72□□□□□ -0.69
COL25A1-208ENST00000610288 CTDP1Q9Y5B0 961 aaPredicted RBP10.72□□□□□ -0.69
COL25A1-208ENST00000610288 PCDHB15Q9Y5E8 787 aa10.72□□□□□ -0.69
COL25A1-208ENST00000610288 CAVIN2O95810 425 aa10.71□□□□□ -0.69
COL25A1-208ENST00000610288 TATP17735 454 aaPredicted RBP10.71□□□□□ -0.69
COL25A1-208ENST00000610288 KRT32Q14532 448 aa10.71□□□□□ -0.69
COL25A1-208ENST00000610288 CLIP2Q9UDT6 1046 aa10.71□□□□□ -0.69
COL25A1-208ENST00000610288 SNAPC4Q5SXM2 1469 aa10.71□□□□□ -0.69
COL25A1-208ENST00000610288 ATAD2Q6PL18 1390 aa10.71□□□□□ -0.69
COL25A1-208ENST00000610288 FAM177BA6PVY3 158 aa10.71□□□□□ -0.69
COL25A1-208ENST00000610288 VGLL3A8MV65 326 aa10.71□□□□□ -0.69
COL25A1-208ENST00000610288 BMS1Q14692 1282 aaKnown RBP10.71□□□□□ -0.69
COL25A1-208ENST00000610288 TTLL5Q6EMB2 1281 aa10.71□□□□□ -0.69
COL25A1-208ENST00000610288 CCDC91Q7Z6B0 441 aa10.71□□□□□ -0.69
COL25A1-208ENST00000610288 DYDC1Q8WWB3 177 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms