RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 HMGB2P26583 209 aaKnown RBP21.26■□□□□ 0.99
SSBP4-214ENST00000607020 COL23A1Q86Y22 540 aaPredicted RBP21.26■□□□□ 0.99
SSBP4-214ENST00000607020 LTV1Q96GA3 475 aaPredicted RBP21.26■□□□□ 0.99
SSBP4-214ENST00000607020 CCNL1Q9UK58 526 aaPredicted RBP21.26■□□□□ 0.99
SSBP4-214ENST00000607020 COL24A1Q17RW2 1714 aa21.26■□□□□ 0.99
SSBP4-214ENST00000607020 HOXC9P31274 260 aa21.25■□□□□ 0.99
SSBP4-214ENST00000607020 MAP3K19Q56UN5 1328 aa21.24■□□□□ 0.99
SSBP4-214ENST00000607020 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
SSBP4-214ENST00000607020 CD2APQ9Y5K6 639 aa21.23■□□□□ 0.99
SSBP4-214ENST00000607020 QSER1Q2KHR3 1735 aa21.23■□□□□ 0.99
SSBP4-214ENST00000607020 CGNL1Q0VF96 1302 aa21.23■□□□□ 0.99
SSBP4-214ENST00000607020 COG3Q96JB2 828 aa21.22■□□□□ 0.99
SSBP4-214ENST00000607020 AMPHP49418 695 aa21.21■□□□□ 0.99
SSBP4-214ENST00000607020 USP47Q96K76 1375 aa21.21■□□□□ 0.99
SSBP4-214ENST00000607020 FLAD1Q8NFF5 587 aa21.2■□□□□ 0.98
SSBP4-214ENST00000607020 CEP350Q5VT06 3117 aa21.2■□□□□ 0.98
SSBP4-214ENST00000607020 MSH5O43196 834 aa21.19■□□□□ 0.98
SSBP4-214ENST00000607020 SHANK3Q9BYB0 1731 aa21.18■□□□□ 0.98
SSBP4-214ENST00000607020 NBPF6Q5VWK0 638 aa21.18■□□□□ 0.98
SSBP4-214ENST00000607020 NBPF4Q96M43 638 aa21.18■□□□□ 0.98
SSBP4-214ENST00000607020 LTN1O94822 1766 aa21.18■□□□□ 0.98
SSBP4-214ENST00000607020 SLC24A1O60721 1099 aa21.17■□□□□ 0.98
SSBP4-214ENST00000607020 MEGF6O75095 1541 aa21.17■□□□□ 0.98
SSBP4-214ENST00000607020 ATP10DQ9P241 1426 aa21.16■□□□□ 0.98
SSBP4-214ENST00000607020 RTL1A6NKG5 1358 aa21.16■□□□□ 0.98
SSBP4-214ENST00000607020 FBLN1P23142 703 aa21.16■□□□□ 0.98
SSBP4-214ENST00000607020 TESK2Q96S53 571 aa21.16■□□□□ 0.98
SSBP4-214ENST00000607020 MSL1Q68DK7 614 aa21.14■□□□□ 0.97
SSBP4-214ENST00000607020 RAPGEF4Q8WZA2 1011 aa21.14■□□□□ 0.97
SSBP4-214ENST00000607020 GPBP1L1Q9HC44 474 aaPredicted RBP21.14■□□□□ 0.97
SSBP4-214ENST00000607020 FAM208AQ9UK61 1670 aaKnown RBP21.14■□□□□ 0.97
SSBP4-214ENST00000607020 KAT6BQ8WYB5 2073 aa21.14■□□□□ 0.97
SSBP4-214ENST00000607020 LY75O60449 1722 aa21.12■□□□□ 0.97
SSBP4-214ENST00000607020 ADCY9O60503 1353 aa21.12■□□□□ 0.97
SSBP4-214ENST00000607020 TATP17735 454 aaPredicted RBP21.11■□□□□ 0.97
SSBP4-214ENST00000607020 FYB1O15117 783 aa21.1■□□□□ 0.97
SSBP4-214ENST00000607020 HSPA6P17066 643 aa21.1■□□□□ 0.97
SSBP4-214ENST00000607020 PALLDQ8WX93 1383 aa21.1■□□□□ 0.97
SSBP4-214ENST00000607020 PCDH11XQ9BZA7 1347 aa21.09■□□□□ 0.97
SSBP4-214ENST00000607020 PCDH11YQ9BZA8 1340 aa21.09■□□□□ 0.97
SSBP4-214ENST00000607020 RRS1Q15050 365 aaKnown RBP21.09■□□□□ 0.97
SSBP4-214ENST00000607020 SMARCC1Q92922 1105 aaPredicted RBP21.09■□□□□ 0.97
SSBP4-214ENST00000607020 ST20-MTHFSA0A0A6YYL1 179 aa21.08■□□□□ 0.97
SSBP4-214ENST00000607020 USHBP1Q8N6Y0 703 aa21.08■□□□□ 0.97
SSBP4-214ENST00000607020 TUBGCP6Q96RT7 1819 aa21.08■□□□□ 0.96
SSBP4-214ENST00000607020 DOT1LQ8TEK3 1739 aa21.07■□□□□ 0.96
SSBP4-214ENST00000607020 SMG6Q86US8 1419 aaKnown RBP21.06■□□□□ 0.96
SSBP4-214ENST00000607020 CYP27B1O15528 508 aa21.06■□□□□ 0.96
SSBP4-214ENST00000607020 MPRIPQ6WCQ1 1025 aa21.06■□□□□ 0.96
SSBP4-214ENST00000607020 INSRP06213 1382 aa21.06■□□□□ 0.96
SSBP4-214ENST00000607020 KIF24Q5T7B8 1368 aa21.06■□□□□ 0.96
SSBP4-214ENST00000607020 HSP90AB2PQ58FF8 381 aa21.05■□□□□ 0.96
SSBP4-214ENST00000607020 NKX1-1Q15270 411 aaPredicted RBP21.04■□□□□ 0.96
SSBP4-214ENST00000607020 AMIGO3Q86WK7 504 aa21.04■□□□□ 0.96
SSBP4-214ENST00000607020 AK7Q96M32 723 aa21.04■□□□□ 0.96
SSBP4-214ENST00000607020 GGNBP2Q9H3C7 697 aa21.04■□□□□ 0.96
SSBP4-214ENST00000607020 SSFA2P28290 1259 aa21.03■□□□□ 0.96
SSBP4-214ENST00000607020 IGSF1Q8N6C5 1336 aa21.03■□□□□ 0.96
SSBP4-214ENST00000607020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.02■□□□□ 0.96
SSBP4-214ENST00000607020 PIGBQ92521 554 aa21.02■□□□□ 0.96
SSBP4-214ENST00000607020 NSD3Q9BZ95 1437 aa21.02■□□□□ 0.96
SSBP4-214ENST00000607020 FLT4P35916 1363 aa21.01■□□□□ 0.95
SSBP4-214ENST00000607020 TONSLQ96HA7 1378 aa21■□□□□ 0.95
SSBP4-214ENST00000607020 KIF3CO14782 793 aa21■□□□□ 0.95
SSBP4-214ENST00000607020 ZNF526Q8TF50 670 aaPredicted RBP21■□□□□ 0.95
SSBP4-214ENST00000607020 LOC102724428A0A0B4J2F2 783 aa20.98■□□□□ 0.95
SSBP4-214ENST00000607020 SIK1P57059 783 aa20.98■□□□□ 0.95
SSBP4-214ENST00000607020 PHF14O94880 888 aa20.97■□□□□ 0.95
SSBP4-214ENST00000607020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.97■□□□□ 0.95
SSBP4-214ENST00000607020 TMF1P82094 1093 aa20.96■□□□□ 0.95
SSBP4-214ENST00000607020 SMIM5Q71RC9 77 aa20.96■□□□□ 0.95
SSBP4-214ENST00000607020 LINC00116Q8NCU8 138 aa20.96■□□□□ 0.95
SSBP4-214ENST00000607020 SPG7Q9UQ90 795 aa20.96■□□□□ 0.95
SSBP4-214ENST00000607020 C5P01031 1676 aa20.96■□□□□ 0.95
SSBP4-214ENST00000607020 NCAPD2Q15021 1401 aa20.95■□□□□ 0.95
SSBP4-214ENST00000607020 C4BP0C0L5 1744 aa20.93■□□□□ 0.94
SSBP4-214ENST00000607020 RGPD2P0DJD1 1756 aa20.93■□□□□ 0.94
SSBP4-214ENST00000607020 APLP1P51693 650 aa20.93■□□□□ 0.94
SSBP4-214ENST00000607020 TGFB2P61812 414 aa20.93■□□□□ 0.94
SSBP4-214ENST00000607020 ITPK1Q13572 414 aa20.92■□□□□ 0.94
SSBP4-214ENST00000607020 CDCA8Q53HL2 280 aa20.92■□□□□ 0.94
SSBP4-214ENST00000607020 GNPATO15228 680 aa20.91■□□□□ 0.94
SSBP4-214ENST00000607020 TMOD3Q9NYL9 352 aa20.91■□□□□ 0.94
SSBP4-214ENST00000607020 WWC3Q9ULE0 1092 aa20.91■□□□□ 0.94
SSBP4-214ENST00000607020 ASAP1Q9ULH1 1129 aa20.91■□□□□ 0.94
SSBP4-214ENST00000607020 EMILIN1Q9Y6C2 1016 aa20.91■□□□□ 0.94
SSBP4-214ENST00000607020 WASHC2AQ641Q2 1341 aa20.9■□□□□ 0.94
SSBP4-214ENST00000607020 TOMM70O94826 608 aa20.9■□□□□ 0.94
SSBP4-214ENST00000607020 MMP10P09238 476 aa20.9■□□□□ 0.94
SSBP4-214ENST00000607020 DNAJC5GQ8N7S2 189 aa20.9■□□□□ 0.94
SSBP4-214ENST00000607020 CARD14Q9BXL6 1004 aa20.9■□□□□ 0.94
SSBP4-214ENST00000607020 ATP6V1AP38606 617 aa20.89■□□□□ 0.93
SSBP4-214ENST00000607020 NLGN1Q8N2Q7 840 aa20.89■□□□□ 0.93
SSBP4-214ENST00000607020 ATG3Q9NT62 314 aa20.89■□□□□ 0.93
SSBP4-214ENST00000607020 IFNL2Q8IZJ0 200 aa20.88■□□□□ 0.93
SSBP4-214ENST00000607020 EYA1Q99502 592 aa20.88■□□□□ 0.93
SSBP4-214ENST00000607020 TAF1LQ8IZX4 1826 aa20.88■□□□□ 0.93
SSBP4-214ENST00000607020 TOGARAM1Q9Y4F4 1720 aa20.87■□□□□ 0.93
SSBP4-214ENST00000607020 CICQ96RK0 1608 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-214ENST00000607020 PHKG2P15735 406 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms